Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E52:E27
Extra
PDB:
ATOM 1 O3' G A 51 5.965 11.368 97.735 1.00 80.92 O
ATOM 2 P U A 52 5.596 10.952 99.240 1.00 77.40 P
ATOM 3 OP1 U A 52 4.941 9.628 99.185 1.00 74.95 O
ATOM 4 OP2 U A 52 4.903 12.086 99.902 1.00 64.96 O
ATOM 5 O5' U A 52 7.016 10.768 99.927 1.00 79.23 O
ATOM 6 C5' U A 52 7.886 9.732 99.501 1.00 78.58 C
ATOM 7 C4' U A 52 9.195 9.806 100.247 1.00 74.06 C
ATOM 8 O4' U A 52 9.895 11.018 99.868 1.00 66.73 O
ATOM 9 C3' U A 52 9.097 9.896 101.760 1.00 67.31 C
ATOM 10 O3' U A 52 8.936 8.613 102.341 1.00 50.51 O
ATOM 11 C2' U A 52 10.450 10.493 102.104 1.00 72.10 C
ATOM 12 O2' U A 52 11.475 9.531 102.003 1.00 60.33 O
ATOM 13 C1' U A 52 10.607 11.523 100.984 1.00 74.99 C
ATOM 14 N1 U A 52 10.018 12.818 101.353 1.00 70.28 N
ATOM 15 C2 U A 52 10.807 13.707 102.055 1.00 63.22 C
ATOM 16 O2 U A 52 11.967 13.478 102.342 1.00 60.89 O
ATOM 17 N3 U A 52 10.185 14.875 102.408 1.00 58.93 N
ATOM 18 C4 U A 52 8.893 15.239 102.128 1.00 58.01 C
ATOM 19 O4 U A 52 8.482 16.330 102.512 1.00 68.11 O
ATOM 20 C5 U A 52 8.145 14.278 101.384 1.00 58.94 C
ATOM 21 C6 U A 52 8.719 13.129 101.028 1.00 63.00 C
ATOM 22 P G A 53 8.147 8.465 103.730 1.00 69.64 P
ATOM 23 OP1 G A 53 7.862 7.027 103.951 1.00 66.41 O
ATOM 24 OP2 G A 53 7.032 9.441 103.710 1.00 72.17 O
ATOM 25 O5' G A 53 9.194 8.944 104.826 1.00 67.15 O
TER
ATOM 1 O3' C B 26 15.483 23.431 108.572 1.00 45.97 O
ATOM 2 P A B 27 16.242 23.146 107.197 1.00 64.22 P
ATOM 3 OP1 A B 27 17.629 23.644 107.323 1.00 78.21 O
ATOM 4 OP2 A B 27 15.385 23.632 106.088 1.00 54.06 O
ATOM 5 O5' A B 27 16.295 21.558 107.129 1.00 81.46 O
ATOM 6 C5' A B 27 17.228 20.822 107.916 1.00 68.26 C
ATOM 7 C4' A B 27 17.331 19.420 107.391 1.00 53.68 C
ATOM 8 O4' A B 27 16.065 18.750 107.597 1.00 63.31 O
ATOM 9 C3' A B 27 17.536 19.376 105.893 1.00 62.78 C
ATOM 10 O3' A B 27 18.917 19.434 105.617 1.00 58.16 O
ATOM 11 C2' A B 27 16.948 18.028 105.511 1.00 62.72 C
ATOM 12 O2' A B 27 17.863 16.982 105.720 1.00 67.39 O
ATOM 13 C1' A B 27 15.784 17.910 106.495 1.00 65.06 C
ATOM 14 N9 A B 27 14.477 18.293 105.963 1.00 67.28 N
ATOM 15 C8 A B 27 13.844 19.499 106.100 1.00 66.78 C
ATOM 16 N7 A B 27 12.659 19.539 105.545 1.00 65.47 N
ATOM 17 C5 A B 27 12.505 18.277 104.999 1.00 63.17 C
ATOM 18 C6 A B 27 11.464 17.687 104.281 1.00 69.25 C
ATOM 19 N6 A B 27 10.329 18.317 103.970 1.00 74.65 N
ATOM 20 N1 A B 27 11.624 16.410 103.883 1.00 70.73 N
ATOM 21 C2 A B 27 12.759 15.782 104.189 1.00 68.36 C
ATOM 22 N3 A B 27 13.812 16.230 104.858 1.00 66.20 N
ATOM 23 C4 A B 27 13.618 17.500 105.243 1.00 64.08 C
ATOM 24 P C B 28 19.408 19.955 104.192 1.00 68.07 P
ATOM 25 OP1 C B 28 20.861 20.235 104.307 1.00 66.73 O
ATOM 26 OP2 C B 28 18.478 21.026 103.756 1.00 69.63 O
ATOM 27 O5' C B 28 19.207 18.705 103.229 1.00 75.26 O
TER
ATOM 2 P U A 52 5.596 10.952 99.240 1.00 77.40 P
ATOM 3 OP1 U A 52 4.941 9.628 99.185 1.00 74.95 O
ATOM 4 OP2 U A 52 4.903 12.086 99.902 1.00 64.96 O
ATOM 5 O5' U A 52 7.016 10.768 99.927 1.00 79.23 O
ATOM 6 C5' U A 52 7.886 9.732 99.501 1.00 78.58 C
ATOM 7 C4' U A 52 9.195 9.806 100.247 1.00 74.06 C
ATOM 8 O4' U A 52 9.895 11.018 99.868 1.00 66.73 O
ATOM 9 C3' U A 52 9.097 9.896 101.760 1.00 67.31 C
ATOM 10 O3' U A 52 8.936 8.613 102.341 1.00 50.51 O
ATOM 11 C2' U A 52 10.450 10.493 102.104 1.00 72.10 C
ATOM 12 O2' U A 52 11.475 9.531 102.003 1.00 60.33 O
ATOM 13 C1' U A 52 10.607 11.523 100.984 1.00 74.99 C
ATOM 14 N1 U A 52 10.018 12.818 101.353 1.00 70.28 N
ATOM 15 C2 U A 52 10.807 13.707 102.055 1.00 63.22 C
ATOM 16 O2 U A 52 11.967 13.478 102.342 1.00 60.89 O
ATOM 17 N3 U A 52 10.185 14.875 102.408 1.00 58.93 N
ATOM 18 C4 U A 52 8.893 15.239 102.128 1.00 58.01 C
ATOM 19 O4 U A 52 8.482 16.330 102.512 1.00 68.11 O
ATOM 20 C5 U A 52 8.145 14.278 101.384 1.00 58.94 C
ATOM 21 C6 U A 52 8.719 13.129 101.028 1.00 63.00 C
ATOM 22 P G A 53 8.147 8.465 103.730 1.00 69.64 P
ATOM 23 OP1 G A 53 7.862 7.027 103.951 1.00 66.41 O
ATOM 24 OP2 G A 53 7.032 9.441 103.710 1.00 72.17 O
ATOM 25 O5' G A 53 9.194 8.944 104.826 1.00 67.15 O
TER
ATOM 1 O3' C B 26 15.483 23.431 108.572 1.00 45.97 O
ATOM 2 P A B 27 16.242 23.146 107.197 1.00 64.22 P
ATOM 3 OP1 A B 27 17.629 23.644 107.323 1.00 78.21 O
ATOM 4 OP2 A B 27 15.385 23.632 106.088 1.00 54.06 O
ATOM 5 O5' A B 27 16.295 21.558 107.129 1.00 81.46 O
ATOM 6 C5' A B 27 17.228 20.822 107.916 1.00 68.26 C
ATOM 7 C4' A B 27 17.331 19.420 107.391 1.00 53.68 C
ATOM 8 O4' A B 27 16.065 18.750 107.597 1.00 63.31 O
ATOM 9 C3' A B 27 17.536 19.376 105.893 1.00 62.78 C
ATOM 10 O3' A B 27 18.917 19.434 105.617 1.00 58.16 O
ATOM 11 C2' A B 27 16.948 18.028 105.511 1.00 62.72 C
ATOM 12 O2' A B 27 17.863 16.982 105.720 1.00 67.39 O
ATOM 13 C1' A B 27 15.784 17.910 106.495 1.00 65.06 C
ATOM 14 N9 A B 27 14.477 18.293 105.963 1.00 67.28 N
ATOM 15 C8 A B 27 13.844 19.499 106.100 1.00 66.78 C
ATOM 16 N7 A B 27 12.659 19.539 105.545 1.00 65.47 N
ATOM 17 C5 A B 27 12.505 18.277 104.999 1.00 63.17 C
ATOM 18 C6 A B 27 11.464 17.687 104.281 1.00 69.25 C
ATOM 19 N6 A B 27 10.329 18.317 103.970 1.00 74.65 N
ATOM 20 N1 A B 27 11.624 16.410 103.883 1.00 70.73 N
ATOM 21 C2 A B 27 12.759 15.782 104.189 1.00 68.36 C
ATOM 22 N3 A B 27 13.812 16.230 104.858 1.00 66.20 N
ATOM 23 C4 A B 27 13.618 17.500 105.243 1.00 64.08 C
ATOM 24 P C B 28 19.408 19.955 104.192 1.00 68.07 P
ATOM 25 OP1 C B 28 20.861 20.235 104.307 1.00 66.73 O
ATOM 26 OP2 C B 28 18.478 21.026 103.756 1.00 69.63 O
ATOM 27 O5' C B 28 19.207 18.705 103.229 1.00 75.26 O
TER
Atoms:
C4: (8.893,15.239,102.128)
N3: (10.185,14.875,102.408)
OP1: (4.941,9.628,99.185)
OP2: (4.903,12.086,99.902)
C2: (10.807,13.707,102.055)
C1': (10.607,11.523,100.984)
C3': (9.097,9.896,101.760)
O5': (7.016,10.768,99.927)
O4': (9.895,11.018,99.868)
C5': (7.886,9.732,99.501)
P: (5.596,10.952,99.240)
C4': (9.195,9.806,100.247)
C2': (10.450,10.493,102.104)
O2': (11.475,9.531,102.003)
N1: (10.018,12.818,101.353)
O4: (8.482,16.330,102.512)
O2: (11.967,13.478,102.342)
C6: (8.719,13.129,101.028)
C5: (8.145,14.278,101.384)
O3': (8.936,8.613,102.341)
N3: (10.185,14.875,102.408)
OP1: (4.941,9.628,99.185)
OP2: (4.903,12.086,99.902)
C2: (10.807,13.707,102.055)
C1': (10.607,11.523,100.984)
C3': (9.097,9.896,101.760)
O5': (7.016,10.768,99.927)
O4': (9.895,11.018,99.868)
C5': (7.886,9.732,99.501)
P: (5.596,10.952,99.240)
C4': (9.195,9.806,100.247)
C2': (10.450,10.493,102.104)
O2': (11.475,9.531,102.003)
N1: (10.018,12.818,101.353)
O4: (8.482,16.330,102.512)
O2: (11.967,13.478,102.342)
C6: (8.719,13.129,101.028)
C5: (8.145,14.278,101.384)
O3': (8.936,8.613,102.341)
OP1: (17.629,23.644,107.323)
OP2: (15.385,23.632,106.088)
C3': (17.536,19.376,105.893)
C1': (15.784,17.910,106.495)
C5': (17.228,20.822,107.916)
O4': (16.065,18.750,107.597)
C8: (13.844,19.499,106.100)
O2': (17.863,16.982,105.720)
C6: (11.464,17.687,104.281)
C5: (12.505,18.277,104.999)
C4: (13.618,17.500,105.243)
P: (16.242,23.146,107.197)
C4': (17.331,19.420,107.391)
C2': (16.948,18.028,105.511)
C2: (12.759,15.782,104.189)
N1: (11.624,16.410,103.883)
N3: (13.812,16.230,104.858)
N6: (10.329,18.317,103.970)
N7: (12.659,19.539,105.545)
N9: (14.477,18.293,105.963)
O5': (16.295,21.558,107.129)
O3': (18.917,19.434,105.617)
OP2: (15.385,23.632,106.088)
C3': (17.536,19.376,105.893)
C1': (15.784,17.910,106.495)
C5': (17.228,20.822,107.916)
O4': (16.065,18.750,107.597)
C8: (13.844,19.499,106.100)
O2': (17.863,16.982,105.720)
C6: (11.464,17.687,104.281)
C5: (12.505,18.277,104.999)
C4: (13.618,17.500,105.243)
P: (16.242,23.146,107.197)
C4': (17.331,19.420,107.391)
C2': (16.948,18.028,105.511)
C2: (12.759,15.782,104.189)
N1: (11.624,16.410,103.883)
N3: (13.812,16.230,104.858)
N6: (10.329,18.317,103.970)
N7: (12.659,19.539,105.545)
N9: (14.477,18.293,105.963)
O5': (16.295,21.558,107.129)
O3': (18.917,19.434,105.617)
Image (generated by PyMOL):