ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:21359:21330

Extra

PDB:
ATOM 1 O3' C A1358 -118.651 -73.934 60.102 1.00116.06 O
ATOM 2 P U A1359 -118.473 -72.347 59.970 1.00123.35 P
ATOM 3 OP1 U A1359 -119.174 -71.737 61.123 1.00123.91 O
ATOM 4 OP2 U A1359 -118.907 -71.975 58.590 1.00123.34 O
ATOM 5 O5' U A1359 -116.890 -72.156 60.121 1.00122.14 O
ATOM 6 C5' U A1359 -116.168 -72.789 61.180 1.00122.00 C
ATOM 7 C4' U A1359 -114.681 -72.480 61.133 1.00120.82 C
ATOM 8 O4' U A1359 -114.107 -73.020 59.910 1.00120.35 O
ATOM 9 C3' U A1359 -114.308 -70.999 61.152 1.00120.11 C
ATOM 10 O3' U A1359 -113.034 -70.839 61.820 1.00119.29 O
ATOM 11 C2' U A1359 -114.164 -70.698 59.653 1.00119.66 C
ATOM 12 O2' U A1359 -113.406 -69.552 59.342 1.00118.74 O
ATOM 13 C1' U A1359 -113.500 -71.981 59.162 1.00119.48 C
ATOM 14 N1 U A1359 -113.700 -72.286 57.719 1.00119.48 N
ATOM 15 C2 U A1359 -112.634 -72.875 57.036 1.00118.80 C
ATOM 16 O2 U A1359 -111.557 -73.092 57.564 1.00118.21 O
ATOM 17 N3 U A1359 -112.855 -73.198 55.708 1.00118.85 N
ATOM 18 C4 U A1359 -114.033 -73.016 55.001 1.00119.53 C
ATOM 19 O4 U A1359 -114.099 -73.351 53.810 1.00119.52 O
ATOM 20 C5 U A1359 -115.089 -72.418 55.776 1.00120.22 C
ATOM 21 C6 U A1359 -114.904 -72.089 57.071 1.00120.18 C
ATOM 22 P U A1360 -112.952 -70.449 63.403 1.00105.90 P
ATOM 23 OP1 U A1360 -114.331 -70.470 63.944 1.00107.00 O
ATOM 24 OP2 U A1360 -112.177 -69.189 63.509 1.00105.00 O
ATOM 25 O5' U A1360 -112.109 -71.643 64.034 1.00105.82 O
TER

ATOM 1 O3' U B1329 -103.878 -72.285 46.575 1.00 98.55 O
ATOM 2 P A B1330 -103.883 -73.659 47.402 1.00 99.64 P
ATOM 3 OP1 A B1330 -102.525 -74.244 47.294 1.00 98.99 O
ATOM 4 OP2 A B1330 -105.044 -74.452 46.918 1.00100.53 O
ATOM 5 O5' A B1330 -104.156 -73.174 48.894 1.00 99.78 O
ATOM 6 C5' A B1330 -103.218 -72.381 49.586 1.00 99.05 C
ATOM 7 C4' A B1330 -103.454 -72.425 51.069 1.00 99.34 C
ATOM 8 O4' A B1330 -104.556 -71.560 51.411 1.00 99.79 O
ATOM 9 C3' A B1330 -103.845 -73.774 51.642 1.00100.02 C
ATOM 10 O3' A B1330 -102.734 -74.625 51.850 1.00 99.64 O
ATOM 11 C2' A B1330 -104.562 -73.397 52.934 1.00100.49 C
ATOM 12 O2' A B1330 -103.627 -73.204 53.988 1.00100.00 O
ATOM 13 C1' A B1330 -105.200 -72.043 52.569 1.00100.45 C
ATOM 14 N9 A B1330 -106.651 -72.154 52.289 1.00101.36 N
ATOM 15 C8 A B1330 -107.232 -72.075 51.050 1.00101.58 C
ATOM 16 N7 A B1330 -108.543 -72.206 51.049 1.00102.47 N
ATOM 17 C5 A B1330 -108.868 -72.365 52.388 1.00102.86 C
ATOM 18 C6 A B1330 -110.116 -72.546 53.038 1.00103.81 C
ATOM 19 N6 A B1330 -111.288 -72.603 52.396 1.00104.54 N
ATOM 20 N1 A B1330 -110.114 -72.676 54.388 1.00104.01 N
ATOM 21 C2 A B1330 -108.917 -72.629 54.996 1.00103.28 C
ATOM 22 N3 A B1330 -107.677 -72.462 54.499 1.00102.36 N
ATOM 23 C4 A B1330 -107.709 -72.332 53.163 1.00102.18 C
ATOM 24 P G B1331 -102.861 -76.208 51.598 1.00109.44 P
ATOM 25 OP1 G B1331 -101.586 -76.831 52.039 1.00108.95 O
ATOM 26 OP2 G B1331 -103.297 -76.391 50.195 1.00109.59 O
ATOM 27 O5' G B1331 -104.031 -76.627 52.589 1.00110.39 O
TER

Atoms:
C4: (-114.033,-73.016,55.001)
N3: (-112.855,-73.198,55.708)
OP1: (-119.174,-71.737,61.123)
OP2: (-118.907,-71.975,58.590)
C2: (-112.634,-72.875,57.036)
C1': (-113.500,-71.981,59.162)
C3': (-114.308,-70.999,61.152)
O5': (-116.890,-72.156,60.121)
O4': (-114.107,-73.020,59.910)
C5': (-116.168,-72.789,61.180)
P: (-118.473,-72.347,59.970)
C4': (-114.681,-72.480,61.133)
C2': (-114.164,-70.698,59.653)
O2': (-113.406,-69.552,59.342)
N1: (-113.700,-72.286,57.719)
O4: (-114.099,-73.351,53.810)
O2: (-111.557,-73.092,57.564)
C6: (-114.904,-72.089,57.071)
C5: (-115.089,-72.418,55.776)
O3': (-113.034,-70.839,61.820)
OP1: (-102.525,-74.244,47.294)
OP2: (-105.044,-74.452,46.918)
C3': (-103.845,-73.774,51.642)
C1': (-105.200,-72.043,52.569)
C5': (-103.218,-72.381,49.586)
O4': (-104.556,-71.560,51.411)
C8: (-107.232,-72.075,51.050)
O2': (-103.627,-73.204,53.988)
C6: (-110.116,-72.546,53.038)
C5: (-108.868,-72.365,52.388)
C4: (-107.709,-72.332,53.163)
P: (-103.883,-73.659,47.402)
C4': (-103.454,-72.425,51.069)
C2': (-104.562,-73.397,52.934)
C2: (-108.917,-72.629,54.996)
N1: (-110.114,-72.676,54.388)
N3: (-107.677,-72.462,54.499)
N6: (-111.288,-72.603,52.396)
N7: (-108.543,-72.206,51.049)
N9: (-106.651,-72.154,52.289)
O5': (-104.156,-73.174,48.894)
O3': (-102.734,-74.625,51.850)
Image (generated by PyMOL):
PyMOL image
show in jmol