ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QTQ:B63:B5

Extra

PDB:
ATOM 1 O3' G A 62 29.976 40.425 46.040 1.00 64.91 O
ATOM 2 P U A 63 31.389 39.956 45.453 1.00 59.24 P
ATOM 3 OP1 U A 63 32.399 40.014 46.539 1.00 66.64 O
ATOM 4 OP2 U A 63 31.607 40.732 44.205 1.00 52.02 O
ATOM 5 O5' U A 63 31.139 38.424 45.097 1.00 58.68 O
ATOM 6 C5' U A 63 30.689 37.520 46.098 1.00 48.29 C
ATOM 7 C4' U A 63 30.239 36.228 45.471 1.00 48.71 C
ATOM 8 O4' U A 63 29.050 36.451 44.673 1.00 54.65 O
ATOM 9 C3' U A 63 31.220 35.606 44.500 1.00 49.40 C
ATOM 10 O3' U A 63 32.210 34.848 45.157 1.00 56.39 O
ATOM 11 C2' U A 63 30.330 34.739 43.625 1.00 50.47 C
ATOM 12 O2' U A 63 30.046 33.495 44.232 1.00 44.52 O
ATOM 13 C1' U A 63 29.063 35.592 43.544 1.00 51.88 C
ATOM 14 N1 U A 63 29.023 36.422 42.330 1.00 54.77 N
ATOM 15 C2 U A 63 28.795 35.785 41.124 1.00 51.62 C
ATOM 16 O2 U A 63 28.628 34.578 41.033 1.00 43.62 O
ATOM 17 N3 U A 63 28.770 36.613 40.028 1.00 53.48 N
ATOM 18 C4 U A 63 28.948 37.983 40.016 1.00 56.55 C
ATOM 19 O4 U A 63 28.903 38.591 38.944 1.00 57.74 O
ATOM 20 C5 U A 63 29.179 38.567 41.302 1.00 54.86 C
ATOM 21 C6 U A 63 29.207 37.787 42.388 1.00 51.98 C
ATOM 22 P A A 64 33.634 34.667 44.457 1.00 53.19 P
ATOM 23 OP1 A A 64 34.615 34.196 45.469 1.00 55.71 O
ATOM 24 OP2 A A 64 33.878 35.936 43.725 1.00 49.16 O
ATOM 25 O5' A A 64 33.379 33.511 43.394 1.00 50.03 O
TER

ATOM 1 O3' U B 4 27.959 32.968 28.006 1.00 35.73 O
ATOM 2 P A B 5 26.470 32.831 28.609 1.00 37.34 P
ATOM 3 OP1 A B 5 25.662 32.003 27.677 1.00 43.75 O
ATOM 4 OP2 A B 5 25.990 34.178 28.993 1.00 33.69 O
ATOM 5 O5' A B 5 26.713 32.018 29.955 1.00 40.24 O
ATOM 6 C5' A B 5 25.635 31.530 30.736 1.00 36.03 C
ATOM 7 C4' A B 5 26.181 30.842 31.961 1.00 38.42 C
ATOM 8 O4' A B 5 27.095 31.751 32.625 1.00 39.22 O
ATOM 9 C3' A B 5 25.151 30.412 32.997 1.00 41.76 C
ATOM 10 O3' A B 5 25.586 29.193 33.595 1.00 46.43 O
ATOM 11 C2' A B 5 25.217 31.539 34.028 1.00 39.96 C
ATOM 12 O2' A B 5 24.913 31.127 35.347 1.00 48.18 O
ATOM 13 C1' A B 5 26.683 31.952 33.955 1.00 35.49 C
ATOM 14 N9 A B 5 26.883 33.361 34.279 1.00 36.95 N
ATOM 15 C8 A B 5 26.708 34.443 33.458 1.00 37.15 C
ATOM 16 N7 A B 5 26.980 35.590 34.031 1.00 37.37 N
ATOM 17 C5 A B 5 27.356 35.240 35.317 1.00 44.34 C
ATOM 18 C6 A B 5 27.769 36.001 36.424 1.00 46.14 C
ATOM 19 N6 A B 5 27.876 37.330 36.408 1.00 51.22 N
ATOM 20 N1 A B 5 28.073 35.343 37.561 1.00 49.91 N
ATOM 21 C2 A B 5 27.963 34.007 37.578 1.00 49.89 C
ATOM 22 N3 A B 5 27.586 33.180 36.604 1.00 48.29 N
ATOM 23 C4 A B 5 27.295 33.867 35.487 1.00 45.90 C
ATOM 24 P U B 6 25.183 27.785 32.932 1.00 37.77 P
ATOM 25 OP1 U B 6 25.370 26.724 33.950 1.00 46.23 O
ATOM 26 OP2 U B 6 25.902 27.694 31.639 1.00 44.03 O
ATOM 27 O5' U B 6 23.628 27.911 32.616 1.00 42.23 O
TER

Atoms:
C4: (28.948,37.983,40.016)
N3: (28.770,36.613,40.028)
OP1: (32.399,40.014,46.539)
OP2: (31.607,40.732,44.205)
C2: (28.795,35.785,41.124)
C1': (29.063,35.592,43.544)
C3': (31.220,35.606,44.500)
O5': (31.139,38.424,45.097)
O4': (29.050,36.451,44.673)
C5': (30.689,37.520,46.098)
P: (31.389,39.956,45.453)
C4': (30.239,36.228,45.471)
C2': (30.330,34.739,43.625)
O2': (30.046,33.495,44.232)
N1: (29.023,36.422,42.330)
O4: (28.903,38.591,38.944)
O2: (28.628,34.578,41.033)
C6: (29.207,37.787,42.388)
C5: (29.179,38.567,41.302)
O3': (32.210,34.848,45.157)
OP1: (25.662,32.003,27.677)
OP2: (25.990,34.178,28.993)
C3': (25.151,30.412,32.997)
C1': (26.683,31.952,33.955)
C5': (25.635,31.530,30.736)
O4': (27.095,31.751,32.625)
C8: (26.708,34.443,33.458)
O2': (24.913,31.127,35.347)
C6: (27.769,36.001,36.424)
C5: (27.356,35.240,35.317)
C4: (27.295,33.867,35.487)
P: (26.470,32.831,28.609)
C4': (26.181,30.842,31.961)
C2': (25.217,31.539,34.028)
C2: (27.963,34.007,37.578)
N1: (28.073,35.343,37.561)
N3: (27.586,33.180,36.604)
N6: (27.876,37.330,36.408)
N7: (26.980,35.590,34.031)
N9: (26.883,33.361,34.279)
O5': (26.713,32.018,29.955)
O3': (25.586,29.193,33.595)
Image (generated by PyMOL):
PyMOL image
show in jmol