Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01265:01307
Extra
PDB:
ATOM 1 O3' C A1264 27.488 122.390 48.687 1.00 30.14 O
ATOM 2 P U A1265 26.187 122.026 47.831 1.00 31.03 P
ATOM 3 OP1 U A1265 26.203 122.908 46.640 1.00 29.91 O
ATOM 4 OP2 U A1265 25.008 122.031 48.736 1.00 28.57 O
ATOM 5 O5' U A1265 26.468 120.538 47.347 1.00 28.02 O
ATOM 6 C5' U A1265 27.483 120.283 46.365 1.00 29.90 C
ATOM 7 C4' U A1265 27.396 118.863 45.866 1.00 31.89 C
ATOM 8 O4' U A1265 27.715 117.928 46.929 1.00 32.88 O
ATOM 9 C3' U A1265 26.032 118.400 45.386 1.00 31.38 C
ATOM 10 O3' U A1265 25.759 118.854 44.074 1.00 32.51 O
ATOM 11 C2' U A1265 26.182 116.892 45.446 1.00 30.72 C
ATOM 12 O2' U A1265 26.992 116.417 44.382 1.00 31.86 O
ATOM 13 C1' U A1265 26.953 116.739 46.756 1.00 31.81 C
ATOM 14 N1 U A1265 26.090 116.569 47.937 1.00 30.95 N
ATOM 15 C2 U A1265 25.652 115.290 48.252 1.00 29.90 C
ATOM 16 O2 U A1265 25.886 114.315 47.557 1.00 31.37 O
ATOM 17 N3 U A1265 24.924 115.197 49.408 1.00 28.16 N
ATOM 18 C4 U A1265 24.578 116.228 50.259 1.00 31.68 C
ATOM 19 O4 U A1265 23.990 115.976 51.320 1.00 31.32 O
ATOM 20 C5 U A1265 25.027 117.520 49.839 1.00 31.45 C
ATOM 21 C6 U A1265 25.747 117.643 48.723 1.00 30.12 C
ATOM 22 P A A1266 24.247 119.166 43.647 1.00 33.87 P
ATOM 23 OP1 A A1266 24.314 119.767 42.282 1.00 32.92 O
ATOM 24 OP2 A A1266 23.585 119.919 44.746 1.00 29.76 O
ATOM 25 O5' A A1266 23.595 117.713 43.551 1.00 31.58 O
TER
ATOM 1 O3' U B1306 18.137 105.824 52.907 1.00 42.75 O
ATOM 2 P A B1307 19.581 105.505 53.529 1.00 44.63 P
ATOM 3 OP1 A B1307 19.657 104.041 53.766 1.00 46.40 O
ATOM 4 OP2 A B1307 19.810 106.448 54.651 1.00 40.32 O
ATOM 5 O5' A B1307 20.598 105.858 52.359 1.00 43.67 O
ATOM 6 C5' A B1307 20.613 105.092 51.145 1.00 43.06 C
ATOM 7 C4' A B1307 21.511 105.745 50.124 1.00 42.81 C
ATOM 8 O4' A B1307 21.017 107.076 49.811 1.00 44.50 O
ATOM 9 C3' A B1307 22.943 105.995 50.560 1.00 42.59 C
ATOM 10 O3' A B1307 23.724 104.806 50.452 1.00 41.45 O
ATOM 11 C2' A B1307 23.382 107.078 49.583 1.00 41.89 C
ATOM 12 O2' A B1307 23.678 106.544 48.309 1.00 42.19 O
ATOM 13 C1' A B1307 22.107 107.919 49.475 1.00 41.10 C
ATOM 14 N9 A B1307 22.078 109.092 50.349 1.00 39.88 N
ATOM 15 C8 A B1307 21.458 109.241 51.567 1.00 39.06 C
ATOM 16 N7 A B1307 21.610 110.431 52.097 1.00 37.08 N
ATOM 17 C5 A B1307 22.386 111.112 51.169 1.00 38.05 C
ATOM 18 C6 A B1307 22.896 112.426 51.137 1.00 37.31 C
ATOM 19 N6 A B1307 22.703 113.324 52.104 1.00 33.21 N
ATOM 20 N1 A B1307 23.626 112.788 50.061 1.00 38.64 N
ATOM 21 C2 A B1307 23.831 111.887 49.090 1.00 39.53 C
ATOM 22 N3 A B1307 23.410 110.628 49.006 1.00 40.29 N
ATOM 23 C4 A B1307 22.683 110.298 50.089 1.00 39.46 C
ATOM 24 P G B1308 25.177 104.745 51.128 1.00 38.84 P
ATOM 25 OP1 G B1308 25.786 103.439 50.764 1.00 35.64 O
ATOM 26 OP2 G B1308 25.064 105.139 52.559 1.00 34.43 O
ATOM 27 O5' G B1308 25.968 105.884 50.345 1.00 38.36 O
TER
ATOM 2 P U A1265 26.187 122.026 47.831 1.00 31.03 P
ATOM 3 OP1 U A1265 26.203 122.908 46.640 1.00 29.91 O
ATOM 4 OP2 U A1265 25.008 122.031 48.736 1.00 28.57 O
ATOM 5 O5' U A1265 26.468 120.538 47.347 1.00 28.02 O
ATOM 6 C5' U A1265 27.483 120.283 46.365 1.00 29.90 C
ATOM 7 C4' U A1265 27.396 118.863 45.866 1.00 31.89 C
ATOM 8 O4' U A1265 27.715 117.928 46.929 1.00 32.88 O
ATOM 9 C3' U A1265 26.032 118.400 45.386 1.00 31.38 C
ATOM 10 O3' U A1265 25.759 118.854 44.074 1.00 32.51 O
ATOM 11 C2' U A1265 26.182 116.892 45.446 1.00 30.72 C
ATOM 12 O2' U A1265 26.992 116.417 44.382 1.00 31.86 O
ATOM 13 C1' U A1265 26.953 116.739 46.756 1.00 31.81 C
ATOM 14 N1 U A1265 26.090 116.569 47.937 1.00 30.95 N
ATOM 15 C2 U A1265 25.652 115.290 48.252 1.00 29.90 C
ATOM 16 O2 U A1265 25.886 114.315 47.557 1.00 31.37 O
ATOM 17 N3 U A1265 24.924 115.197 49.408 1.00 28.16 N
ATOM 18 C4 U A1265 24.578 116.228 50.259 1.00 31.68 C
ATOM 19 O4 U A1265 23.990 115.976 51.320 1.00 31.32 O
ATOM 20 C5 U A1265 25.027 117.520 49.839 1.00 31.45 C
ATOM 21 C6 U A1265 25.747 117.643 48.723 1.00 30.12 C
ATOM 22 P A A1266 24.247 119.166 43.647 1.00 33.87 P
ATOM 23 OP1 A A1266 24.314 119.767 42.282 1.00 32.92 O
ATOM 24 OP2 A A1266 23.585 119.919 44.746 1.00 29.76 O
ATOM 25 O5' A A1266 23.595 117.713 43.551 1.00 31.58 O
TER
ATOM 1 O3' U B1306 18.137 105.824 52.907 1.00 42.75 O
ATOM 2 P A B1307 19.581 105.505 53.529 1.00 44.63 P
ATOM 3 OP1 A B1307 19.657 104.041 53.766 1.00 46.40 O
ATOM 4 OP2 A B1307 19.810 106.448 54.651 1.00 40.32 O
ATOM 5 O5' A B1307 20.598 105.858 52.359 1.00 43.67 O
ATOM 6 C5' A B1307 20.613 105.092 51.145 1.00 43.06 C
ATOM 7 C4' A B1307 21.511 105.745 50.124 1.00 42.81 C
ATOM 8 O4' A B1307 21.017 107.076 49.811 1.00 44.50 O
ATOM 9 C3' A B1307 22.943 105.995 50.560 1.00 42.59 C
ATOM 10 O3' A B1307 23.724 104.806 50.452 1.00 41.45 O
ATOM 11 C2' A B1307 23.382 107.078 49.583 1.00 41.89 C
ATOM 12 O2' A B1307 23.678 106.544 48.309 1.00 42.19 O
ATOM 13 C1' A B1307 22.107 107.919 49.475 1.00 41.10 C
ATOM 14 N9 A B1307 22.078 109.092 50.349 1.00 39.88 N
ATOM 15 C8 A B1307 21.458 109.241 51.567 1.00 39.06 C
ATOM 16 N7 A B1307 21.610 110.431 52.097 1.00 37.08 N
ATOM 17 C5 A B1307 22.386 111.112 51.169 1.00 38.05 C
ATOM 18 C6 A B1307 22.896 112.426 51.137 1.00 37.31 C
ATOM 19 N6 A B1307 22.703 113.324 52.104 1.00 33.21 N
ATOM 20 N1 A B1307 23.626 112.788 50.061 1.00 38.64 N
ATOM 21 C2 A B1307 23.831 111.887 49.090 1.00 39.53 C
ATOM 22 N3 A B1307 23.410 110.628 49.006 1.00 40.29 N
ATOM 23 C4 A B1307 22.683 110.298 50.089 1.00 39.46 C
ATOM 24 P G B1308 25.177 104.745 51.128 1.00 38.84 P
ATOM 25 OP1 G B1308 25.786 103.439 50.764 1.00 35.64 O
ATOM 26 OP2 G B1308 25.064 105.139 52.559 1.00 34.43 O
ATOM 27 O5' G B1308 25.968 105.884 50.345 1.00 38.36 O
TER
Atoms:
C4: (24.578,116.228,50.259)
N3: (24.924,115.197,49.408)
OP1: (26.203,122.908,46.640)
OP2: (25.008,122.031,48.736)
C2: (25.652,115.290,48.252)
C1': (26.953,116.739,46.756)
C3': (26.032,118.400,45.386)
O5': (26.468,120.538,47.347)
O4': (27.715,117.928,46.929)
C5': (27.483,120.283,46.365)
P: (26.187,122.026,47.831)
C4': (27.396,118.863,45.866)
C2': (26.182,116.892,45.446)
O2': (26.992,116.417,44.382)
N1: (26.090,116.569,47.937)
O4: (23.990,115.976,51.320)
O2: (25.886,114.315,47.557)
C6: (25.747,117.643,48.723)
C5: (25.027,117.520,49.839)
O3': (25.759,118.854,44.074)
N3: (24.924,115.197,49.408)
OP1: (26.203,122.908,46.640)
OP2: (25.008,122.031,48.736)
C2: (25.652,115.290,48.252)
C1': (26.953,116.739,46.756)
C3': (26.032,118.400,45.386)
O5': (26.468,120.538,47.347)
O4': (27.715,117.928,46.929)
C5': (27.483,120.283,46.365)
P: (26.187,122.026,47.831)
C4': (27.396,118.863,45.866)
C2': (26.182,116.892,45.446)
O2': (26.992,116.417,44.382)
N1: (26.090,116.569,47.937)
O4: (23.990,115.976,51.320)
O2: (25.886,114.315,47.557)
C6: (25.747,117.643,48.723)
C5: (25.027,117.520,49.839)
O3': (25.759,118.854,44.074)
OP1: (19.657,104.041,53.766)
OP2: (19.810,106.448,54.651)
C3': (22.943,105.995,50.560)
C1': (22.107,107.919,49.475)
C5': (20.613,105.092,51.145)
O4': (21.017,107.076,49.811)
C8: (21.458,109.241,51.567)
O2': (23.678,106.544,48.309)
C6: (22.896,112.426,51.137)
C5: (22.386,111.112,51.169)
C4: (22.683,110.298,50.089)
P: (19.581,105.505,53.529)
C4': (21.511,105.745,50.124)
C2': (23.382,107.078,49.583)
C2: (23.831,111.887,49.090)
N1: (23.626,112.788,50.061)
N3: (23.410,110.628,49.006)
N6: (22.703,113.324,52.104)
N7: (21.610,110.431,52.097)
N9: (22.078,109.092,50.349)
O5': (20.598,105.858,52.359)
O3': (23.724,104.806,50.452)
OP2: (19.810,106.448,54.651)
C3': (22.943,105.995,50.560)
C1': (22.107,107.919,49.475)
C5': (20.613,105.092,51.145)
O4': (21.017,107.076,49.811)
C8: (21.458,109.241,51.567)
O2': (23.678,106.544,48.309)
C6: (22.896,112.426,51.137)
C5: (22.386,111.112,51.169)
C4: (22.683,110.298,50.089)
P: (19.581,105.505,53.529)
C4': (21.511,105.745,50.124)
C2': (23.382,107.078,49.583)
C2: (23.831,111.887,49.090)
N1: (23.626,112.788,50.061)
N3: (23.410,110.628,49.006)
N6: (22.703,113.324,52.104)
N7: (21.610,110.431,52.097)
N9: (22.078,109.092,50.349)
O5': (20.598,105.858,52.359)
O3': (23.724,104.806,50.452)
Image (generated by PyMOL):