ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01478:01625

Extra

PDB:
ATOM 1 O3' A A1477 98.411 183.067 24.290 1.00 83.34 O
ATOM 2 P U A1478 99.937 183.396 23.877 1.00 86.25 P
ATOM 3 OP1 U A1478 100.048 183.074 22.429 1.00 85.88 O
ATOM 4 OP2 U A1478 100.863 182.742 24.844 1.00 85.03 O
ATOM 5 O5' U A1478 100.039 184.980 24.049 1.00 85.71 O
ATOM 6 C5' U A1478 99.226 185.856 23.238 1.00 88.17 C
ATOM 7 C4' U A1478 99.305 187.282 23.736 1.00 89.91 C
ATOM 8 O4' U A1478 98.713 187.375 25.060 1.00 89.57 O
ATOM 9 C3' U A1478 100.695 187.865 23.930 1.00 91.50 C
ATOM 10 O3' U A1478 101.318 188.282 22.724 1.00 94.05 O
ATOM 11 C2' U A1478 100.413 189.024 24.875 1.00 90.90 C
ATOM 12 O2' U A1478 99.849 190.149 24.227 1.00 90.38 O
ATOM 13 C1' U A1478 99.386 188.382 25.810 1.00 89.35 C
ATOM 14 N1 U A1478 100.062 187.747 26.953 1.00 87.53 N
ATOM 15 C2 U A1478 100.234 188.505 28.101 1.00 87.10 C
ATOM 16 O2 U A1478 99.808 189.651 28.220 1.00 86.05 O
ATOM 17 N3 U A1478 100.924 187.874 29.108 1.00 86.22 N
ATOM 18 C4 U A1478 101.439 186.592 29.091 1.00 85.53 C
ATOM 19 O4 U A1478 102.063 186.179 30.069 1.00 84.96 O
ATOM 20 C5 U A1478 101.198 185.867 27.884 1.00 85.27 C
ATOM 21 C6 U A1478 100.535 186.451 26.883 1.00 86.45 C
ATOM 22 P G A1479 102.918 188.191 22.590 1.00 95.25 P
ATOM 23 OP1 G A1479 103.261 188.582 21.198 1.00 95.79 O
ATOM 24 OP2 G A1479 103.372 186.877 23.117 1.00 93.92 O
ATOM 25 O5' G A1479 103.451 189.322 23.575 1.00 95.05 O
TER

ATOM 1 O3' C B1624 105.794 192.151 39.261 1.00 87.24 O
ATOM 2 P A B1625 104.180 192.179 39.366 1.00 87.26 P
ATOM 3 OP1 A B1625 103.838 192.596 40.749 1.00 86.67 O
ATOM 4 OP2 A B1625 103.639 190.904 38.834 1.00 87.57 O
ATOM 5 O5' A B1625 103.730 193.345 38.371 1.00 86.19 O
ATOM 6 C5' A B1625 104.279 193.404 37.048 1.00 83.67 C
ATOM 7 C4' A B1625 103.444 194.254 36.124 1.00 82.29 C
ATOM 8 O4' A B1625 103.947 193.986 34.786 1.00 81.89 O
ATOM 9 C3' A B1625 101.951 193.937 36.079 1.00 81.94 C
ATOM 10 O3' A B1625 101.211 194.899 36.838 1.00 81.23 O
ATOM 11 C2' A B1625 101.618 193.993 34.590 1.00 82.25 C
ATOM 12 O2' A B1625 101.396 195.305 34.116 1.00 83.35 O
ATOM 13 C1' A B1625 102.913 193.462 33.979 1.00 82.25 C
ATOM 14 N9 A B1625 103.028 192.000 33.977 1.00 82.15 N
ATOM 15 C8 A B1625 103.592 191.192 34.938 1.00 82.51 C
ATOM 16 N7 A B1625 103.542 189.915 34.655 1.00 82.40 N
ATOM 17 C5 A B1625 102.902 189.873 33.425 1.00 82.01 C
ATOM 18 C6 A B1625 102.546 188.807 32.585 1.00 81.61 C
ATOM 19 N6 A B1625 102.784 187.527 32.873 1.00 81.13 N
ATOM 20 N1 A B1625 101.926 189.105 31.424 1.00 82.13 N
ATOM 21 C2 A B1625 101.684 190.391 31.137 1.00 81.81 C
ATOM 22 N3 A B1625 101.964 191.480 31.847 1.00 81.12 N
ATOM 23 C4 A B1625 102.582 191.149 32.993 1.00 81.67 C
ATOM 24 P U B1626 99.677 194.611 37.238 1.00 80.12 P
ATOM 25 OP1 U B1626 99.129 195.848 37.855 1.00 78.46 O
ATOM 26 OP2 U B1626 99.644 193.334 38.002 1.00 80.73 O
ATOM 27 O5' U B1626 98.935 194.392 35.844 1.00 79.09 O
TER

Atoms:
C4: (101.439,186.592,29.091)
N3: (100.924,187.874,29.108)
OP1: (100.048,183.074,22.429)
OP2: (100.863,182.742,24.844)
C2: (100.234,188.505,28.101)
C1': (99.386,188.382,25.810)
C3': (100.695,187.865,23.930)
O5': (100.039,184.980,24.049)
O4': (98.713,187.375,25.060)
C5': (99.226,185.856,23.238)
P: (99.937,183.396,23.877)
C4': (99.305,187.282,23.736)
C2': (100.413,189.024,24.875)
O2': (99.849,190.149,24.227)
N1: (100.062,187.747,26.953)
O4: (102.063,186.179,30.069)
O2: (99.808,189.651,28.220)
C6: (100.535,186.451,26.883)
C5: (101.198,185.867,27.884)
O3': (101.318,188.282,22.724)
OP1: (103.838,192.596,40.749)
OP2: (103.639,190.904,38.834)
C3': (101.951,193.937,36.079)
C1': (102.913,193.462,33.979)
C5': (104.279,193.404,37.048)
O4': (103.947,193.986,34.786)
C8: (103.592,191.192,34.938)
O2': (101.396,195.305,34.116)
C6: (102.546,188.807,32.585)
C5: (102.902,189.873,33.425)
C4: (102.582,191.149,32.993)
P: (104.180,192.179,39.366)
C4': (103.444,194.254,36.124)
C2': (101.618,193.993,34.590)
C2: (101.684,190.391,31.137)
N1: (101.926,189.105,31.424)
N3: (101.964,191.480,31.847)
N6: (102.784,187.527,32.873)
N7: (103.542,189.915,34.655)
N9: (103.028,192.000,33.977)
O5': (103.730,193.345,38.371)
O3': (101.211,194.899,36.838)
Image (generated by PyMOL):
PyMOL image
show in jmol