Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A7:A37
Extra
PDB:
ATOM 1 O3' A A 6 10.426 9.291 -0.394 1.00 24.95 O
ATOM 2 P U A 7 11.754 8.728 -1.100 1.00 25.13 P
ATOM 3 OP1 U A 7 12.148 9.719 -2.125 1.00 25.40 O
ATOM 4 OP2 U A 7 11.510 7.320 -1.498 1.00 25.14 O
ATOM 5 O5' U A 7 12.835 8.753 0.072 1.00 25.17 O
ATOM 6 C5' U A 7 14.040 8.000 -0.019 1.00 24.52 C
ATOM 7 C4' U A 7 14.598 7.724 1.362 1.00 24.39 C
ATOM 8 O4' U A 7 15.020 8.986 1.956 1.00 23.52 O
ATOM 9 C3' U A 7 13.566 7.154 2.334 1.00 24.29 C
ATOM 10 O3' U A 7 14.183 6.395 3.368 1.00 25.57 O
ATOM 11 C2' U A 7 12.938 8.406 2.932 1.00 24.15 C
ATOM 12 O2' U A 7 12.403 8.187 4.222 1.00 23.41 O
ATOM 13 C1' U A 7 14.151 9.330 3.020 1.00 23.63 C
ATOM 14 N1 U A 7 13.831 10.761 2.954 1.00 23.53 N
ATOM 15 C2 U A 7 14.059 11.515 4.092 1.00 23.05 C
ATOM 16 O2 U A 7 14.545 11.047 5.110 1.00 22.92 O
ATOM 17 N3 U A 7 13.700 12.834 3.996 1.00 23.41 N
ATOM 18 C4 U A 7 13.157 13.467 2.903 1.00 23.16 C
ATOM 19 O4 U A 7 12.827 14.649 2.993 1.00 24.00 O
ATOM 20 C5 U A 7 12.973 12.626 1.756 1.00 23.61 C
ATOM 21 C6 U A 7 13.309 11.335 1.820 1.00 22.90 C
ATOM 22 P A A 8 14.490 4.836 3.140 1.00 26.53 P
ATOM 23 OP1 A A 8 13.781 4.406 1.900 1.00 27.40 O
ATOM 24 OP2 A A 8 14.241 4.119 4.415 1.00 27.84 O
ATOM 25 O5' A A 8 16.051 4.794 2.833 1.00 26.22 O
TER
ATOM 1 O3' U B 36 10.904 20.114 12.569 1.00 33.79 O
ATOM 2 P A B 37 12.463 20.327 12.239 1.00 34.09 P
ATOM 3 OP1 A B 37 13.050 21.117 13.351 1.00 34.47 O
ATOM 4 OP2 A B 37 12.591 20.817 10.844 1.00 33.63 O
ATOM 5 O5' A B 37 13.081 18.860 12.293 1.00 32.46 O
ATOM 6 C5' A B 37 13.297 18.200 13.536 1.00 30.22 C
ATOM 7 C4' A B 37 13.930 16.852 13.300 1.00 28.79 C
ATOM 8 O4' A B 37 13.079 16.101 12.394 1.00 28.69 O
ATOM 9 C3' A B 37 15.297 16.896 12.631 1.00 27.94 C
ATOM 10 O3' A B 37 16.314 16.938 13.631 1.00 27.76 O
ATOM 11 C2' A B 37 15.339 15.576 11.863 1.00 26.83 C
ATOM 12 O2' A B 37 15.749 14.489 12.666 1.00 26.57 O
ATOM 13 C1' A B 37 13.873 15.389 11.466 1.00 26.79 C
ATOM 14 N9 A B 37 13.532 15.850 10.119 1.00 26.12 N
ATOM 15 C8 A B 37 12.970 17.047 9.749 1.00 25.33 C
ATOM 16 N7 A B 37 12.754 17.154 8.459 1.00 24.69 N
ATOM 17 C5 A B 37 13.209 15.950 7.944 1.00 24.76 C
ATOM 18 C6 A B 37 13.254 15.436 6.636 1.00 24.35 C
ATOM 19 N6 A B 37 12.819 16.098 5.562 1.00 24.56 N
ATOM 20 N1 A B 37 13.771 14.201 6.467 1.00 24.10 N
ATOM 21 C2 A B 37 14.213 13.538 7.540 1.00 23.91 C
ATOM 22 N3 A B 37 14.226 13.912 8.816 1.00 24.09 N
ATOM 23 C4 A B 37 13.701 15.141 8.953 1.00 24.88 C
ATOM 24 P C B 38 17.561 17.938 13.467 1.00 28.75 P
ATOM 25 OP1 C B 38 18.318 17.916 14.742 1.00 28.99 O
ATOM 26 OP2 C B 38 17.058 19.228 12.932 1.00 28.28 O
ATOM 27 O5' C B 38 18.463 17.270 12.339 1.00 27.31 O
TER
ATOM 2 P U A 7 11.754 8.728 -1.100 1.00 25.13 P
ATOM 3 OP1 U A 7 12.148 9.719 -2.125 1.00 25.40 O
ATOM 4 OP2 U A 7 11.510 7.320 -1.498 1.00 25.14 O
ATOM 5 O5' U A 7 12.835 8.753 0.072 1.00 25.17 O
ATOM 6 C5' U A 7 14.040 8.000 -0.019 1.00 24.52 C
ATOM 7 C4' U A 7 14.598 7.724 1.362 1.00 24.39 C
ATOM 8 O4' U A 7 15.020 8.986 1.956 1.00 23.52 O
ATOM 9 C3' U A 7 13.566 7.154 2.334 1.00 24.29 C
ATOM 10 O3' U A 7 14.183 6.395 3.368 1.00 25.57 O
ATOM 11 C2' U A 7 12.938 8.406 2.932 1.00 24.15 C
ATOM 12 O2' U A 7 12.403 8.187 4.222 1.00 23.41 O
ATOM 13 C1' U A 7 14.151 9.330 3.020 1.00 23.63 C
ATOM 14 N1 U A 7 13.831 10.761 2.954 1.00 23.53 N
ATOM 15 C2 U A 7 14.059 11.515 4.092 1.00 23.05 C
ATOM 16 O2 U A 7 14.545 11.047 5.110 1.00 22.92 O
ATOM 17 N3 U A 7 13.700 12.834 3.996 1.00 23.41 N
ATOM 18 C4 U A 7 13.157 13.467 2.903 1.00 23.16 C
ATOM 19 O4 U A 7 12.827 14.649 2.993 1.00 24.00 O
ATOM 20 C5 U A 7 12.973 12.626 1.756 1.00 23.61 C
ATOM 21 C6 U A 7 13.309 11.335 1.820 1.00 22.90 C
ATOM 22 P A A 8 14.490 4.836 3.140 1.00 26.53 P
ATOM 23 OP1 A A 8 13.781 4.406 1.900 1.00 27.40 O
ATOM 24 OP2 A A 8 14.241 4.119 4.415 1.00 27.84 O
ATOM 25 O5' A A 8 16.051 4.794 2.833 1.00 26.22 O
TER
ATOM 1 O3' U B 36 10.904 20.114 12.569 1.00 33.79 O
ATOM 2 P A B 37 12.463 20.327 12.239 1.00 34.09 P
ATOM 3 OP1 A B 37 13.050 21.117 13.351 1.00 34.47 O
ATOM 4 OP2 A B 37 12.591 20.817 10.844 1.00 33.63 O
ATOM 5 O5' A B 37 13.081 18.860 12.293 1.00 32.46 O
ATOM 6 C5' A B 37 13.297 18.200 13.536 1.00 30.22 C
ATOM 7 C4' A B 37 13.930 16.852 13.300 1.00 28.79 C
ATOM 8 O4' A B 37 13.079 16.101 12.394 1.00 28.69 O
ATOM 9 C3' A B 37 15.297 16.896 12.631 1.00 27.94 C
ATOM 10 O3' A B 37 16.314 16.938 13.631 1.00 27.76 O
ATOM 11 C2' A B 37 15.339 15.576 11.863 1.00 26.83 C
ATOM 12 O2' A B 37 15.749 14.489 12.666 1.00 26.57 O
ATOM 13 C1' A B 37 13.873 15.389 11.466 1.00 26.79 C
ATOM 14 N9 A B 37 13.532 15.850 10.119 1.00 26.12 N
ATOM 15 C8 A B 37 12.970 17.047 9.749 1.00 25.33 C
ATOM 16 N7 A B 37 12.754 17.154 8.459 1.00 24.69 N
ATOM 17 C5 A B 37 13.209 15.950 7.944 1.00 24.76 C
ATOM 18 C6 A B 37 13.254 15.436 6.636 1.00 24.35 C
ATOM 19 N6 A B 37 12.819 16.098 5.562 1.00 24.56 N
ATOM 20 N1 A B 37 13.771 14.201 6.467 1.00 24.10 N
ATOM 21 C2 A B 37 14.213 13.538 7.540 1.00 23.91 C
ATOM 22 N3 A B 37 14.226 13.912 8.816 1.00 24.09 N
ATOM 23 C4 A B 37 13.701 15.141 8.953 1.00 24.88 C
ATOM 24 P C B 38 17.561 17.938 13.467 1.00 28.75 P
ATOM 25 OP1 C B 38 18.318 17.916 14.742 1.00 28.99 O
ATOM 26 OP2 C B 38 17.058 19.228 12.932 1.00 28.28 O
ATOM 27 O5' C B 38 18.463 17.270 12.339 1.00 27.31 O
TER
Atoms:
C4: (13.157,13.467,2.903)
N3: (13.700,12.834,3.996)
OP1: (12.148,9.719,-2.125)
OP2: (11.510,7.320,-1.498)
C2: (14.059,11.515,4.092)
C1': (14.151,9.330,3.020)
C3': (13.566,7.154,2.334)
O5': (12.835,8.753,0.072)
O4': (15.020,8.986,1.956)
C5': (14.040,8.000,-0.019)
P: (11.754,8.728,-1.100)
C4': (14.598,7.724,1.362)
C2': (12.938,8.406,2.932)
O2': (12.403,8.187,4.222)
N1: (13.831,10.761,2.954)
O4: (12.827,14.649,2.993)
O2: (14.545,11.047,5.110)
C6: (13.309,11.335,1.820)
C5: (12.973,12.626,1.756)
O3': (14.183,6.395,3.368)
N3: (13.700,12.834,3.996)
OP1: (12.148,9.719,-2.125)
OP2: (11.510,7.320,-1.498)
C2: (14.059,11.515,4.092)
C1': (14.151,9.330,3.020)
C3': (13.566,7.154,2.334)
O5': (12.835,8.753,0.072)
O4': (15.020,8.986,1.956)
C5': (14.040,8.000,-0.019)
P: (11.754,8.728,-1.100)
C4': (14.598,7.724,1.362)
C2': (12.938,8.406,2.932)
O2': (12.403,8.187,4.222)
N1: (13.831,10.761,2.954)
O4: (12.827,14.649,2.993)
O2: (14.545,11.047,5.110)
C6: (13.309,11.335,1.820)
C5: (12.973,12.626,1.756)
O3': (14.183,6.395,3.368)
OP1: (13.050,21.117,13.351)
OP2: (12.591,20.817,10.844)
C3': (15.297,16.896,12.631)
C1': (13.873,15.389,11.466)
C5': (13.297,18.200,13.536)
O4': (13.079,16.101,12.394)
C8: (12.970,17.047,9.749)
O2': (15.749,14.489,12.666)
C6: (13.254,15.436,6.636)
C5: (13.209,15.950,7.944)
C4: (13.701,15.141,8.953)
P: (12.463,20.327,12.239)
C4': (13.930,16.852,13.300)
C2': (15.339,15.576,11.863)
C2: (14.213,13.538,7.540)
N1: (13.771,14.201,6.467)
N3: (14.226,13.912,8.816)
N6: (12.819,16.098,5.562)
N7: (12.754,17.154,8.459)
N9: (13.532,15.850,10.119)
O5': (13.081,18.860,12.293)
O3': (16.314,16.938,13.631)
OP2: (12.591,20.817,10.844)
C3': (15.297,16.896,12.631)
C1': (13.873,15.389,11.466)
C5': (13.297,18.200,13.536)
O4': (13.079,16.101,12.394)
C8: (12.970,17.047,9.749)
O2': (15.749,14.489,12.666)
C6: (13.254,15.436,6.636)
C5: (13.209,15.950,7.944)
C4: (13.701,15.141,8.953)
P: (12.463,20.327,12.239)
C4': (13.930,16.852,13.300)
C2': (15.339,15.576,11.863)
C2: (14.213,13.538,7.540)
N1: (13.771,14.201,6.467)
N3: (14.226,13.912,8.816)
N6: (12.819,16.098,5.562)
N7: (12.754,17.154,8.459)
N9: (13.532,15.850,10.119)
O5': (13.081,18.860,12.293)
O3': (16.314,16.938,13.631)
Image (generated by PyMOL):