Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A572:A561
Extra
PDB:
ATOM 1 O3' G A 571 -0.047 83.298 119.954 1.00 69.55 O
ATOM 2 P U A 572 -1.046 83.743 118.767 1.00 70.16 P
ATOM 3 OP1 U A 572 -0.700 83.005 117.520 1.00 69.11 O
ATOM 4 OP2 U A 572 -1.117 85.225 118.742 1.00 69.86 O
ATOM 5 O5' U A 572 -2.481 83.257 119.258 1.00 70.87 O
ATOM 6 C5' U A 572 -2.782 81.858 119.453 1.00 69.58 C
ATOM 7 C4' U A 572 -4.169 81.707 120.030 1.00 68.31 C
ATOM 8 O4' U A 572 -4.209 82.240 121.378 1.00 68.39 O
ATOM 9 C3' U A 572 -5.234 82.491 119.293 1.00 67.96 C
ATOM 10 O3' U A 572 -5.682 81.769 118.162 1.00 67.27 O
ATOM 11 C2' U A 572 -6.311 82.654 120.352 1.00 68.40 C
ATOM 12 O2' U A 572 -7.082 81.479 120.511 1.00 70.10 O
ATOM 13 C1' U A 572 -5.459 82.873 121.604 1.00 68.25 C
ATOM 14 N1 U A 572 -5.214 84.294 121.895 1.00 68.31 N
ATOM 15 C2 U A 572 -6.251 85.033 122.445 1.00 69.17 C
ATOM 16 O2 U A 572 -7.350 84.565 122.691 1.00 69.23 O
ATOM 17 N3 U A 572 -5.951 86.350 122.696 1.00 69.19 N
ATOM 18 C4 U A 572 -4.750 86.993 122.463 1.00 68.13 C
ATOM 19 O4 U A 572 -4.618 88.170 122.802 1.00 66.64 O
ATOM 20 C5 U A 572 -3.734 86.165 121.888 1.00 68.26 C
ATOM 21 C6 U A 572 -3.993 84.879 121.632 1.00 68.32 C
ATOM 22 P C A 573 -6.156 82.562 116.854 1.00 65.58 P
ATOM 23 OP1 C A 573 -6.553 81.528 115.874 1.00 65.16 O
ATOM 24 OP2 C A 573 -5.094 83.532 116.498 1.00 65.07 O
ATOM 25 O5' C A 573 -7.452 83.358 117.341 1.00 65.64 O
TER
ATOM 1 O3' G B 560 -12.827 94.470 127.868 1.00 82.49 O
ATOM 2 P A B 561 -12.326 93.304 128.853 1.00 84.79 P
ATOM 3 OP1 A B 561 -13.232 93.306 130.028 1.00 85.73 O
ATOM 4 OP2 A B 561 -10.863 93.461 129.057 1.00 84.29 O
ATOM 5 O5' A B 561 -12.571 91.966 128.019 1.00 83.51 O
ATOM 6 C5' A B 561 -13.881 91.382 127.925 1.00 83.44 C
ATOM 7 C4' A B 561 -13.781 89.942 127.494 1.00 84.28 C
ATOM 8 O4' A B 561 -13.288 89.896 126.131 1.00 84.81 O
ATOM 9 C3' A B 561 -12.798 89.081 128.276 1.00 85.40 C
ATOM 10 O3' A B 561 -13.336 88.591 129.505 1.00 87.44 O
ATOM 11 C2' A B 561 -12.474 87.981 127.273 1.00 84.98 C
ATOM 12 O2' A B 561 -13.474 86.985 127.160 1.00 84.99 O
ATOM 13 C1' A B 561 -12.412 88.787 125.973 1.00 84.56 C
ATOM 14 N9 A B 561 -11.062 89.302 125.740 1.00 83.42 N
ATOM 15 C8 A B 561 -10.544 90.528 126.098 1.00 82.83 C
ATOM 16 N7 A B 561 -9.274 90.669 125.807 1.00 81.87 N
ATOM 17 C5 A B 561 -8.933 89.465 125.206 1.00 81.80 C
ATOM 18 C6 A B 561 -7.724 88.982 124.682 1.00 81.22 C
ATOM 19 N6 A B 561 -6.585 89.679 124.686 1.00 80.05 N
ATOM 20 N1 A B 561 -7.723 87.739 124.151 1.00 81.51 N
ATOM 21 C2 A B 561 -8.864 87.038 124.154 1.00 81.55 C
ATOM 22 N3 A B 561 -10.064 87.381 124.621 1.00 82.19 N
ATOM 23 C4 A B 561 -10.029 88.621 125.142 1.00 82.39 C
ATOM 24 P C B 562 -12.351 88.258 130.742 1.00 87.94 P
ATOM 25 OP1 C B 562 -13.228 87.887 131.882 1.00 88.48 O
ATOM 26 OP2 C B 562 -11.373 89.368 130.909 1.00 87.96 O
ATOM 27 O5' C B 562 -11.572 86.948 130.269 1.00 85.43 O
TER
ATOM 2 P U A 572 -1.046 83.743 118.767 1.00 70.16 P
ATOM 3 OP1 U A 572 -0.700 83.005 117.520 1.00 69.11 O
ATOM 4 OP2 U A 572 -1.117 85.225 118.742 1.00 69.86 O
ATOM 5 O5' U A 572 -2.481 83.257 119.258 1.00 70.87 O
ATOM 6 C5' U A 572 -2.782 81.858 119.453 1.00 69.58 C
ATOM 7 C4' U A 572 -4.169 81.707 120.030 1.00 68.31 C
ATOM 8 O4' U A 572 -4.209 82.240 121.378 1.00 68.39 O
ATOM 9 C3' U A 572 -5.234 82.491 119.293 1.00 67.96 C
ATOM 10 O3' U A 572 -5.682 81.769 118.162 1.00 67.27 O
ATOM 11 C2' U A 572 -6.311 82.654 120.352 1.00 68.40 C
ATOM 12 O2' U A 572 -7.082 81.479 120.511 1.00 70.10 O
ATOM 13 C1' U A 572 -5.459 82.873 121.604 1.00 68.25 C
ATOM 14 N1 U A 572 -5.214 84.294 121.895 1.00 68.31 N
ATOM 15 C2 U A 572 -6.251 85.033 122.445 1.00 69.17 C
ATOM 16 O2 U A 572 -7.350 84.565 122.691 1.00 69.23 O
ATOM 17 N3 U A 572 -5.951 86.350 122.696 1.00 69.19 N
ATOM 18 C4 U A 572 -4.750 86.993 122.463 1.00 68.13 C
ATOM 19 O4 U A 572 -4.618 88.170 122.802 1.00 66.64 O
ATOM 20 C5 U A 572 -3.734 86.165 121.888 1.00 68.26 C
ATOM 21 C6 U A 572 -3.993 84.879 121.632 1.00 68.32 C
ATOM 22 P C A 573 -6.156 82.562 116.854 1.00 65.58 P
ATOM 23 OP1 C A 573 -6.553 81.528 115.874 1.00 65.16 O
ATOM 24 OP2 C A 573 -5.094 83.532 116.498 1.00 65.07 O
ATOM 25 O5' C A 573 -7.452 83.358 117.341 1.00 65.64 O
TER
ATOM 1 O3' G B 560 -12.827 94.470 127.868 1.00 82.49 O
ATOM 2 P A B 561 -12.326 93.304 128.853 1.00 84.79 P
ATOM 3 OP1 A B 561 -13.232 93.306 130.028 1.00 85.73 O
ATOM 4 OP2 A B 561 -10.863 93.461 129.057 1.00 84.29 O
ATOM 5 O5' A B 561 -12.571 91.966 128.019 1.00 83.51 O
ATOM 6 C5' A B 561 -13.881 91.382 127.925 1.00 83.44 C
ATOM 7 C4' A B 561 -13.781 89.942 127.494 1.00 84.28 C
ATOM 8 O4' A B 561 -13.288 89.896 126.131 1.00 84.81 O
ATOM 9 C3' A B 561 -12.798 89.081 128.276 1.00 85.40 C
ATOM 10 O3' A B 561 -13.336 88.591 129.505 1.00 87.44 O
ATOM 11 C2' A B 561 -12.474 87.981 127.273 1.00 84.98 C
ATOM 12 O2' A B 561 -13.474 86.985 127.160 1.00 84.99 O
ATOM 13 C1' A B 561 -12.412 88.787 125.973 1.00 84.56 C
ATOM 14 N9 A B 561 -11.062 89.302 125.740 1.00 83.42 N
ATOM 15 C8 A B 561 -10.544 90.528 126.098 1.00 82.83 C
ATOM 16 N7 A B 561 -9.274 90.669 125.807 1.00 81.87 N
ATOM 17 C5 A B 561 -8.933 89.465 125.206 1.00 81.80 C
ATOM 18 C6 A B 561 -7.724 88.982 124.682 1.00 81.22 C
ATOM 19 N6 A B 561 -6.585 89.679 124.686 1.00 80.05 N
ATOM 20 N1 A B 561 -7.723 87.739 124.151 1.00 81.51 N
ATOM 21 C2 A B 561 -8.864 87.038 124.154 1.00 81.55 C
ATOM 22 N3 A B 561 -10.064 87.381 124.621 1.00 82.19 N
ATOM 23 C4 A B 561 -10.029 88.621 125.142 1.00 82.39 C
ATOM 24 P C B 562 -12.351 88.258 130.742 1.00 87.94 P
ATOM 25 OP1 C B 562 -13.228 87.887 131.882 1.00 88.48 O
ATOM 26 OP2 C B 562 -11.373 89.368 130.909 1.00 87.96 O
ATOM 27 O5' C B 562 -11.572 86.948 130.269 1.00 85.43 O
TER
Atoms:
C4: (-4.750,86.993,122.463)
N3: (-5.951,86.350,122.696)
OP1: (-0.700,83.005,117.520)
OP2: (-1.117,85.225,118.742)
C2: (-6.251,85.033,122.445)
C1': (-5.459,82.873,121.604)
C3': (-5.234,82.491,119.293)
O5': (-2.481,83.257,119.258)
O4': (-4.209,82.240,121.378)
C5': (-2.782,81.858,119.453)
P: (-1.046,83.743,118.767)
C4': (-4.169,81.707,120.030)
C2': (-6.311,82.654,120.352)
O2': (-7.082,81.479,120.511)
N1: (-5.214,84.294,121.895)
O4: (-4.618,88.170,122.802)
O2: (-7.350,84.565,122.691)
C6: (-3.993,84.879,121.632)
C5: (-3.734,86.165,121.888)
O3': (-5.682,81.769,118.162)
N3: (-5.951,86.350,122.696)
OP1: (-0.700,83.005,117.520)
OP2: (-1.117,85.225,118.742)
C2: (-6.251,85.033,122.445)
C1': (-5.459,82.873,121.604)
C3': (-5.234,82.491,119.293)
O5': (-2.481,83.257,119.258)
O4': (-4.209,82.240,121.378)
C5': (-2.782,81.858,119.453)
P: (-1.046,83.743,118.767)
C4': (-4.169,81.707,120.030)
C2': (-6.311,82.654,120.352)
O2': (-7.082,81.479,120.511)
N1: (-5.214,84.294,121.895)
O4: (-4.618,88.170,122.802)
O2: (-7.350,84.565,122.691)
C6: (-3.993,84.879,121.632)
C5: (-3.734,86.165,121.888)
O3': (-5.682,81.769,118.162)
OP1: (-13.232,93.306,130.028)
OP2: (-10.863,93.461,129.057)
C3': (-12.798,89.081,128.276)
C1': (-12.412,88.787,125.973)
C5': (-13.881,91.382,127.925)
O4': (-13.288,89.896,126.131)
C8: (-10.544,90.528,126.098)
O2': (-13.474,86.985,127.160)
C6: (-7.724,88.982,124.682)
C5: (-8.933,89.465,125.206)
C4: (-10.029,88.621,125.142)
P: (-12.326,93.304,128.853)
C4': (-13.781,89.942,127.494)
C2': (-12.474,87.981,127.273)
C2: (-8.864,87.038,124.154)
N1: (-7.723,87.739,124.151)
N3: (-10.064,87.381,124.621)
N6: (-6.585,89.679,124.686)
N7: (-9.274,90.669,125.807)
N9: (-11.062,89.302,125.740)
O5': (-12.571,91.966,128.019)
O3': (-13.336,88.591,129.505)
OP2: (-10.863,93.461,129.057)
C3': (-12.798,89.081,128.276)
C1': (-12.412,88.787,125.973)
C5': (-13.881,91.382,127.925)
O4': (-13.288,89.896,126.131)
C8: (-10.544,90.528,126.098)
O2': (-13.474,86.985,127.160)
C6: (-7.724,88.982,124.682)
C5: (-8.933,89.465,125.206)
C4: (-10.029,88.621,125.142)
P: (-12.326,93.304,128.853)
C4': (-13.781,89.942,127.494)
C2': (-12.474,87.981,127.273)
C2: (-8.864,87.038,124.154)
N1: (-7.723,87.739,124.151)
N3: (-10.064,87.381,124.621)
N6: (-6.585,89.679,124.686)
N7: (-9.274,90.669,125.807)
N9: (-11.062,89.302,125.740)
O5': (-12.571,91.966,128.019)
O3': (-13.336,88.591,129.505)
Image (generated by PyMOL):