Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0288:0339
Extra
PDB:
ATOM 1 O3' U A 287 40.666 133.694 26.443 1.00 78.36 O
ATOM 2 P U A 288 39.210 134.380 26.550 1.00 78.79 P
ATOM 3 OP1 U A 288 39.175 135.189 27.806 1.00 77.49 O
ATOM 4 OP2 U A 288 38.182 133.318 26.329 1.00 77.87 O
ATOM 5 O5' U A 288 39.160 135.383 25.307 1.00 78.29 O
ATOM 6 C5' U A 288 39.947 136.595 25.293 1.00 76.21 C
ATOM 7 C4' U A 288 39.777 137.329 23.976 1.00 75.01 C
ATOM 8 O4' U A 288 40.231 136.487 22.881 1.00 74.86 O
ATOM 9 C3' U A 288 38.364 137.714 23.560 1.00 73.90 C
ATOM 10 O3' U A 288 37.893 138.891 24.207 1.00 73.64 O
ATOM 11 C2' U A 288 38.532 137.936 22.065 1.00 73.90 C
ATOM 12 O2' U A 288 39.136 139.175 21.756 1.00 74.35 O
ATOM 13 C1' U A 288 39.501 136.809 21.707 1.00 74.67 C
ATOM 14 N1 U A 288 38.792 135.612 21.229 1.00 75.60 N
ATOM 15 C2 U A 288 38.453 135.570 19.886 1.00 76.36 C
ATOM 16 O2 U A 288 38.738 136.462 19.099 1.00 78.04 O
ATOM 17 N3 U A 288 37.770 134.446 19.495 1.00 75.67 N
ATOM 18 C4 U A 288 37.406 133.381 20.282 1.00 75.66 C
ATOM 19 O4 U A 288 36.774 132.452 19.781 1.00 75.65 O
ATOM 20 C5 U A 288 37.801 133.489 21.656 1.00 75.66 C
ATOM 21 C6 U A 288 38.462 134.573 22.073 1.00 75.23 C
ATOM 22 P C A 289 36.314 139.080 24.472 1.00 74.11 P
ATOM 23 OP1 C A 289 36.165 140.303 25.306 1.00 71.70 O
ATOM 24 OP2 C A 289 35.779 137.780 24.968 1.00 74.04 O
ATOM 25 O5' C A 289 35.690 139.352 23.025 1.00 74.75 O
TER
ATOM 1 O3' G B 338 32.527 131.970 8.786 1.00 95.32 O
ATOM 2 P A B 339 34.130 131.848 8.917 1.00 95.90 P
ATOM 3 OP1 A B 339 34.698 131.887 7.541 1.00 96.30 O
ATOM 4 OP2 A B 339 34.444 130.693 9.800 1.00 96.73 O
ATOM 5 O5' A B 339 34.565 133.190 9.666 1.00 94.23 O
ATOM 6 C5' A B 339 34.426 134.480 9.024 1.00 92.38 C
ATOM 7 C4' A B 339 35.121 135.560 9.829 1.00 90.68 C
ATOM 8 O4' A B 339 34.450 135.742 11.104 1.00 90.35 O
ATOM 9 C3' A B 339 36.570 135.287 10.198 1.00 89.73 C
ATOM 10 O3' A B 339 37.446 135.636 9.135 1.00 89.67 O
ATOM 11 C2' A B 339 36.774 136.174 11.419 1.00 89.51 C
ATOM 12 O2' A B 339 37.040 137.520 11.076 1.00 88.35 O
ATOM 13 C1' A B 339 35.407 136.063 12.106 1.00 89.61 C
ATOM 14 N9 A B 339 35.357 135.032 13.151 1.00 88.25 N
ATOM 15 C8 A B 339 34.811 133.771 13.077 1.00 87.24 C
ATOM 16 N7 A B 339 34.940 133.072 14.177 1.00 86.52 N
ATOM 17 C5 A B 339 35.614 133.927 15.037 1.00 86.98 C
ATOM 18 C6 A B 339 36.062 133.775 16.360 1.00 86.64 C
ATOM 19 N6 A B 339 35.891 132.662 17.075 1.00 86.17 N
ATOM 20 N1 A B 339 36.701 134.819 16.929 1.00 86.85 N
ATOM 21 C2 A B 339 36.876 135.937 16.210 1.00 86.58 C
ATOM 22 N3 A B 339 36.504 136.200 14.961 1.00 87.17 N
ATOM 23 C4 A B 339 35.871 135.141 14.422 1.00 87.54 C
ATOM 24 P A B 340 38.940 135.045 9.106 1.00 90.02 P
ATOM 25 OP1 A B 340 39.606 135.565 7.886 1.00 90.98 O
ATOM 26 OP2 A B 340 38.871 133.580 9.333 1.00 89.94 O
ATOM 27 O5' A B 340 39.641 135.732 10.359 1.00 89.20 O
TER
ATOM 2 P U A 288 39.210 134.380 26.550 1.00 78.79 P
ATOM 3 OP1 U A 288 39.175 135.189 27.806 1.00 77.49 O
ATOM 4 OP2 U A 288 38.182 133.318 26.329 1.00 77.87 O
ATOM 5 O5' U A 288 39.160 135.383 25.307 1.00 78.29 O
ATOM 6 C5' U A 288 39.947 136.595 25.293 1.00 76.21 C
ATOM 7 C4' U A 288 39.777 137.329 23.976 1.00 75.01 C
ATOM 8 O4' U A 288 40.231 136.487 22.881 1.00 74.86 O
ATOM 9 C3' U A 288 38.364 137.714 23.560 1.00 73.90 C
ATOM 10 O3' U A 288 37.893 138.891 24.207 1.00 73.64 O
ATOM 11 C2' U A 288 38.532 137.936 22.065 1.00 73.90 C
ATOM 12 O2' U A 288 39.136 139.175 21.756 1.00 74.35 O
ATOM 13 C1' U A 288 39.501 136.809 21.707 1.00 74.67 C
ATOM 14 N1 U A 288 38.792 135.612 21.229 1.00 75.60 N
ATOM 15 C2 U A 288 38.453 135.570 19.886 1.00 76.36 C
ATOM 16 O2 U A 288 38.738 136.462 19.099 1.00 78.04 O
ATOM 17 N3 U A 288 37.770 134.446 19.495 1.00 75.67 N
ATOM 18 C4 U A 288 37.406 133.381 20.282 1.00 75.66 C
ATOM 19 O4 U A 288 36.774 132.452 19.781 1.00 75.65 O
ATOM 20 C5 U A 288 37.801 133.489 21.656 1.00 75.66 C
ATOM 21 C6 U A 288 38.462 134.573 22.073 1.00 75.23 C
ATOM 22 P C A 289 36.314 139.080 24.472 1.00 74.11 P
ATOM 23 OP1 C A 289 36.165 140.303 25.306 1.00 71.70 O
ATOM 24 OP2 C A 289 35.779 137.780 24.968 1.00 74.04 O
ATOM 25 O5' C A 289 35.690 139.352 23.025 1.00 74.75 O
TER
ATOM 1 O3' G B 338 32.527 131.970 8.786 1.00 95.32 O
ATOM 2 P A B 339 34.130 131.848 8.917 1.00 95.90 P
ATOM 3 OP1 A B 339 34.698 131.887 7.541 1.00 96.30 O
ATOM 4 OP2 A B 339 34.444 130.693 9.800 1.00 96.73 O
ATOM 5 O5' A B 339 34.565 133.190 9.666 1.00 94.23 O
ATOM 6 C5' A B 339 34.426 134.480 9.024 1.00 92.38 C
ATOM 7 C4' A B 339 35.121 135.560 9.829 1.00 90.68 C
ATOM 8 O4' A B 339 34.450 135.742 11.104 1.00 90.35 O
ATOM 9 C3' A B 339 36.570 135.287 10.198 1.00 89.73 C
ATOM 10 O3' A B 339 37.446 135.636 9.135 1.00 89.67 O
ATOM 11 C2' A B 339 36.774 136.174 11.419 1.00 89.51 C
ATOM 12 O2' A B 339 37.040 137.520 11.076 1.00 88.35 O
ATOM 13 C1' A B 339 35.407 136.063 12.106 1.00 89.61 C
ATOM 14 N9 A B 339 35.357 135.032 13.151 1.00 88.25 N
ATOM 15 C8 A B 339 34.811 133.771 13.077 1.00 87.24 C
ATOM 16 N7 A B 339 34.940 133.072 14.177 1.00 86.52 N
ATOM 17 C5 A B 339 35.614 133.927 15.037 1.00 86.98 C
ATOM 18 C6 A B 339 36.062 133.775 16.360 1.00 86.64 C
ATOM 19 N6 A B 339 35.891 132.662 17.075 1.00 86.17 N
ATOM 20 N1 A B 339 36.701 134.819 16.929 1.00 86.85 N
ATOM 21 C2 A B 339 36.876 135.937 16.210 1.00 86.58 C
ATOM 22 N3 A B 339 36.504 136.200 14.961 1.00 87.17 N
ATOM 23 C4 A B 339 35.871 135.141 14.422 1.00 87.54 C
ATOM 24 P A B 340 38.940 135.045 9.106 1.00 90.02 P
ATOM 25 OP1 A B 340 39.606 135.565 7.886 1.00 90.98 O
ATOM 26 OP2 A B 340 38.871 133.580 9.333 1.00 89.94 O
ATOM 27 O5' A B 340 39.641 135.732 10.359 1.00 89.20 O
TER
Atoms:
C4: (37.406,133.381,20.282)
N3: (37.770,134.446,19.495)
OP1: (39.175,135.189,27.806)
OP2: (38.182,133.318,26.329)
C2: (38.453,135.570,19.886)
C1': (39.501,136.809,21.707)
C3': (38.364,137.714,23.560)
O5': (39.160,135.383,25.307)
O4': (40.231,136.487,22.881)
C5': (39.947,136.595,25.293)
P: (39.210,134.380,26.550)
C4': (39.777,137.329,23.976)
C2': (38.532,137.936,22.065)
O2': (39.136,139.175,21.756)
N1: (38.792,135.612,21.229)
O4: (36.774,132.452,19.781)
O2: (38.738,136.462,19.099)
C6: (38.462,134.573,22.073)
C5: (37.801,133.489,21.656)
O3': (37.893,138.891,24.207)
N3: (37.770,134.446,19.495)
OP1: (39.175,135.189,27.806)
OP2: (38.182,133.318,26.329)
C2: (38.453,135.570,19.886)
C1': (39.501,136.809,21.707)
C3': (38.364,137.714,23.560)
O5': (39.160,135.383,25.307)
O4': (40.231,136.487,22.881)
C5': (39.947,136.595,25.293)
P: (39.210,134.380,26.550)
C4': (39.777,137.329,23.976)
C2': (38.532,137.936,22.065)
O2': (39.136,139.175,21.756)
N1: (38.792,135.612,21.229)
O4: (36.774,132.452,19.781)
O2: (38.738,136.462,19.099)
C6: (38.462,134.573,22.073)
C5: (37.801,133.489,21.656)
O3': (37.893,138.891,24.207)
OP1: (34.698,131.887,7.541)
OP2: (34.444,130.693,9.800)
C3': (36.570,135.287,10.198)
C1': (35.407,136.063,12.106)
C5': (34.426,134.480,9.024)
O4': (34.450,135.742,11.104)
C8: (34.811,133.771,13.077)
O2': (37.040,137.520,11.076)
C6: (36.062,133.775,16.360)
C5: (35.614,133.927,15.037)
C4: (35.871,135.141,14.422)
P: (34.130,131.848,8.917)
C4': (35.121,135.560,9.829)
C2': (36.774,136.174,11.419)
C2: (36.876,135.937,16.210)
N1: (36.701,134.819,16.929)
N3: (36.504,136.200,14.961)
N6: (35.891,132.662,17.075)
N7: (34.940,133.072,14.177)
N9: (35.357,135.032,13.151)
O5': (34.565,133.190,9.666)
O3': (37.446,135.636,9.135)
OP2: (34.444,130.693,9.800)
C3': (36.570,135.287,10.198)
C1': (35.407,136.063,12.106)
C5': (34.426,134.480,9.024)
O4': (34.450,135.742,11.104)
C8: (34.811,133.771,13.077)
O2': (37.040,137.520,11.076)
C6: (36.062,133.775,16.360)
C5: (35.614,133.927,15.037)
C4: (35.871,135.141,14.422)
P: (34.130,131.848,8.917)
C4': (35.121,135.560,9.829)
C2': (36.774,136.174,11.419)
C2: (36.876,135.937,16.210)
N1: (36.701,134.819,16.929)
N3: (36.504,136.200,14.961)
N6: (35.891,132.662,17.075)
N7: (34.940,133.072,14.177)
N9: (35.357,135.032,13.151)
O5': (34.565,133.190,9.666)
O3': (37.446,135.636,9.135)
Image (generated by PyMOL):