Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0298:0309
Extra
PDB:
ATOM 1 O3' C A 297 0.043 146.137 33.354 1.00 66.65 O
ATOM 2 P U A 298 -0.184 146.543 34.890 1.00 69.66 P
ATOM 3 OP1 U A 298 -0.619 147.967 34.947 1.00 69.12 O
ATOM 4 OP2 U A 298 1.012 146.111 35.659 1.00 70.67 O
ATOM 5 O5' U A 298 -1.396 145.618 35.347 1.00 70.07 O
ATOM 6 C5' U A 298 -2.692 145.738 34.733 1.00 68.94 C
ATOM 7 C4' U A 298 -3.665 144.797 35.393 1.00 67.98 C
ATOM 8 O4' U A 298 -3.330 143.424 35.064 1.00 67.41 O
ATOM 9 C3' U A 298 -3.642 144.839 36.908 1.00 67.34 C
ATOM 10 O3' U A 298 -4.436 145.908 37.395 1.00 68.61 O
ATOM 11 C2' U A 298 -4.198 143.475 37.277 1.00 67.57 C
ATOM 12 O2' U A 298 -5.606 143.425 37.172 1.00 65.70 O
ATOM 13 C1' U A 298 -3.573 142.594 36.189 1.00 67.41 C
ATOM 14 N1 U A 298 -2.303 141.960 36.582 1.00 68.12 N
ATOM 15 C2 U A 298 -2.343 140.935 37.517 1.00 68.12 C
ATOM 16 O2 U A 298 -3.373 140.542 38.034 1.00 68.66 O
ATOM 17 N3 U A 298 -1.125 140.383 37.824 1.00 68.49 N
ATOM 18 C4 U A 298 0.102 140.737 37.309 1.00 68.41 C
ATOM 19 O4 U A 298 1.108 140.130 37.675 1.00 68.35 O
ATOM 20 C5 U A 298 0.064 141.801 36.358 1.00 68.48 C
ATOM 21 C6 U A 298 -1.105 142.363 36.036 1.00 68.49 C
ATOM 22 P C A 299 -3.955 146.732 38.685 1.00 69.93 P
ATOM 23 OP1 C A 299 -4.763 147.977 38.741 1.00 69.42 O
ATOM 24 OP2 C A 299 -2.477 146.827 38.639 1.00 72.32 O
ATOM 25 O5' C A 299 -4.363 145.796 39.908 1.00 67.64 O
TER
ATOM 1 O3' G B 308 1.051 131.712 45.703 1.00 65.72 O
ATOM 2 P A B 309 0.569 130.958 44.369 1.00 67.34 P
ATOM 3 OP1 A B 309 0.083 129.616 44.792 1.00 66.01 O
ATOM 4 OP2 A B 309 1.642 131.059 43.345 1.00 66.56 O
ATOM 5 O5' A B 309 -0.669 131.832 43.873 1.00 66.93 O
ATOM 6 C5' A B 309 -1.923 131.800 44.578 1.00 69.37 C
ATOM 7 C4' A B 309 -2.913 132.751 43.944 1.00 71.02 C
ATOM 8 O4' A B 309 -2.483 134.126 44.152 1.00 71.49 O
ATOM 9 C3' A B 309 -3.072 132.656 42.435 1.00 71.91 C
ATOM 10 O3' A B 309 -3.882 131.573 42.004 1.00 72.02 O
ATOM 11 C2' A B 309 -3.677 134.010 42.105 1.00 72.52 C
ATOM 12 O2' A B 309 -5.052 134.080 42.423 1.00 72.58 O
ATOM 13 C1' A B 309 -2.869 134.921 43.034 1.00 72.98 C
ATOM 14 N9 A B 309 -1.657 135.394 42.355 1.00 73.07 N
ATOM 15 C8 A B 309 -0.396 134.852 42.404 1.00 73.01 C
ATOM 16 N7 A B 309 0.470 135.454 41.627 1.00 72.84 N
ATOM 17 C5 A B 309 -0.264 136.473 41.037 1.00 72.35 C
ATOM 18 C6 A B 309 0.079 137.459 40.100 1.00 71.62 C
ATOM 19 N6 A B 309 1.297 137.585 39.574 1.00 71.53 N
ATOM 20 N1 A B 309 -0.883 138.323 39.715 1.00 71.28 N
ATOM 21 C2 A B 309 -2.104 138.196 40.244 1.00 71.93 C
ATOM 22 N3 A B 309 -2.550 137.311 41.131 1.00 73.22 N
ATOM 23 C4 A B 309 -1.570 136.462 41.490 1.00 73.11 C
ATOM 24 P G B 310 -3.591 130.891 40.576 1.00 73.90 P
ATOM 25 OP1 G B 310 -4.536 129.758 40.430 1.00 74.31 O
ATOM 26 OP2 G B 310 -2.133 130.642 40.447 1.00 74.03 O
ATOM 27 O5' G B 310 -3.992 132.026 39.532 1.00 72.97 O
TER
ATOM 2 P U A 298 -0.184 146.543 34.890 1.00 69.66 P
ATOM 3 OP1 U A 298 -0.619 147.967 34.947 1.00 69.12 O
ATOM 4 OP2 U A 298 1.012 146.111 35.659 1.00 70.67 O
ATOM 5 O5' U A 298 -1.396 145.618 35.347 1.00 70.07 O
ATOM 6 C5' U A 298 -2.692 145.738 34.733 1.00 68.94 C
ATOM 7 C4' U A 298 -3.665 144.797 35.393 1.00 67.98 C
ATOM 8 O4' U A 298 -3.330 143.424 35.064 1.00 67.41 O
ATOM 9 C3' U A 298 -3.642 144.839 36.908 1.00 67.34 C
ATOM 10 O3' U A 298 -4.436 145.908 37.395 1.00 68.61 O
ATOM 11 C2' U A 298 -4.198 143.475 37.277 1.00 67.57 C
ATOM 12 O2' U A 298 -5.606 143.425 37.172 1.00 65.70 O
ATOM 13 C1' U A 298 -3.573 142.594 36.189 1.00 67.41 C
ATOM 14 N1 U A 298 -2.303 141.960 36.582 1.00 68.12 N
ATOM 15 C2 U A 298 -2.343 140.935 37.517 1.00 68.12 C
ATOM 16 O2 U A 298 -3.373 140.542 38.034 1.00 68.66 O
ATOM 17 N3 U A 298 -1.125 140.383 37.824 1.00 68.49 N
ATOM 18 C4 U A 298 0.102 140.737 37.309 1.00 68.41 C
ATOM 19 O4 U A 298 1.108 140.130 37.675 1.00 68.35 O
ATOM 20 C5 U A 298 0.064 141.801 36.358 1.00 68.48 C
ATOM 21 C6 U A 298 -1.105 142.363 36.036 1.00 68.49 C
ATOM 22 P C A 299 -3.955 146.732 38.685 1.00 69.93 P
ATOM 23 OP1 C A 299 -4.763 147.977 38.741 1.00 69.42 O
ATOM 24 OP2 C A 299 -2.477 146.827 38.639 1.00 72.32 O
ATOM 25 O5' C A 299 -4.363 145.796 39.908 1.00 67.64 O
TER
ATOM 1 O3' G B 308 1.051 131.712 45.703 1.00 65.72 O
ATOM 2 P A B 309 0.569 130.958 44.369 1.00 67.34 P
ATOM 3 OP1 A B 309 0.083 129.616 44.792 1.00 66.01 O
ATOM 4 OP2 A B 309 1.642 131.059 43.345 1.00 66.56 O
ATOM 5 O5' A B 309 -0.669 131.832 43.873 1.00 66.93 O
ATOM 6 C5' A B 309 -1.923 131.800 44.578 1.00 69.37 C
ATOM 7 C4' A B 309 -2.913 132.751 43.944 1.00 71.02 C
ATOM 8 O4' A B 309 -2.483 134.126 44.152 1.00 71.49 O
ATOM 9 C3' A B 309 -3.072 132.656 42.435 1.00 71.91 C
ATOM 10 O3' A B 309 -3.882 131.573 42.004 1.00 72.02 O
ATOM 11 C2' A B 309 -3.677 134.010 42.105 1.00 72.52 C
ATOM 12 O2' A B 309 -5.052 134.080 42.423 1.00 72.58 O
ATOM 13 C1' A B 309 -2.869 134.921 43.034 1.00 72.98 C
ATOM 14 N9 A B 309 -1.657 135.394 42.355 1.00 73.07 N
ATOM 15 C8 A B 309 -0.396 134.852 42.404 1.00 73.01 C
ATOM 16 N7 A B 309 0.470 135.454 41.627 1.00 72.84 N
ATOM 17 C5 A B 309 -0.264 136.473 41.037 1.00 72.35 C
ATOM 18 C6 A B 309 0.079 137.459 40.100 1.00 71.62 C
ATOM 19 N6 A B 309 1.297 137.585 39.574 1.00 71.53 N
ATOM 20 N1 A B 309 -0.883 138.323 39.715 1.00 71.28 N
ATOM 21 C2 A B 309 -2.104 138.196 40.244 1.00 71.93 C
ATOM 22 N3 A B 309 -2.550 137.311 41.131 1.00 73.22 N
ATOM 23 C4 A B 309 -1.570 136.462 41.490 1.00 73.11 C
ATOM 24 P G B 310 -3.591 130.891 40.576 1.00 73.90 P
ATOM 25 OP1 G B 310 -4.536 129.758 40.430 1.00 74.31 O
ATOM 26 OP2 G B 310 -2.133 130.642 40.447 1.00 74.03 O
ATOM 27 O5' G B 310 -3.992 132.026 39.532 1.00 72.97 O
TER
Atoms:
C4: (0.102,140.737,37.309)
N3: (-1.125,140.383,37.824)
OP1: (-0.619,147.967,34.947)
OP2: (1.012,146.111,35.659)
C2: (-2.343,140.935,37.517)
C1': (-3.573,142.594,36.189)
C3': (-3.642,144.839,36.908)
O5': (-1.396,145.618,35.347)
O4': (-3.330,143.424,35.064)
C5': (-2.692,145.738,34.733)
P: (-0.184,146.543,34.890)
C4': (-3.665,144.797,35.393)
C2': (-4.198,143.475,37.277)
O2': (-5.606,143.425,37.172)
N1: (-2.303,141.960,36.582)
O4: (1.108,140.130,37.675)
O2: (-3.373,140.542,38.034)
C6: (-1.105,142.363,36.036)
C5: (0.064,141.801,36.358)
O3': (-4.436,145.908,37.395)
N3: (-1.125,140.383,37.824)
OP1: (-0.619,147.967,34.947)
OP2: (1.012,146.111,35.659)
C2: (-2.343,140.935,37.517)
C1': (-3.573,142.594,36.189)
C3': (-3.642,144.839,36.908)
O5': (-1.396,145.618,35.347)
O4': (-3.330,143.424,35.064)
C5': (-2.692,145.738,34.733)
P: (-0.184,146.543,34.890)
C4': (-3.665,144.797,35.393)
C2': (-4.198,143.475,37.277)
O2': (-5.606,143.425,37.172)
N1: (-2.303,141.960,36.582)
O4: (1.108,140.130,37.675)
O2: (-3.373,140.542,38.034)
C6: (-1.105,142.363,36.036)
C5: (0.064,141.801,36.358)
O3': (-4.436,145.908,37.395)
OP1: (0.083,129.616,44.792)
OP2: (1.642,131.059,43.345)
C3': (-3.072,132.656,42.435)
C1': (-2.869,134.921,43.034)
C5': (-1.923,131.800,44.578)
O4': (-2.483,134.126,44.152)
C8: (-0.396,134.852,42.404)
O2': (-5.052,134.080,42.423)
C6: (0.079,137.459,40.100)
C5: (-0.264,136.473,41.037)
C4: (-1.570,136.462,41.490)
P: (0.569,130.958,44.369)
C4': (-2.913,132.751,43.944)
C2': (-3.677,134.010,42.105)
C2: (-2.104,138.196,40.244)
N1: (-0.883,138.323,39.715)
N3: (-2.550,137.311,41.131)
N6: (1.297,137.585,39.574)
N7: (0.470,135.454,41.627)
N9: (-1.657,135.394,42.355)
O5': (-0.669,131.832,43.873)
O3': (-3.882,131.573,42.004)
OP2: (1.642,131.059,43.345)
C3': (-3.072,132.656,42.435)
C1': (-2.869,134.921,43.034)
C5': (-1.923,131.800,44.578)
O4': (-2.483,134.126,44.152)
C8: (-0.396,134.852,42.404)
O2': (-5.052,134.080,42.423)
C6: (0.079,137.459,40.100)
C5: (-0.264,136.473,41.037)
C4: (-1.570,136.462,41.490)
P: (0.569,130.958,44.369)
C4': (-2.913,132.751,43.944)
C2': (-3.677,134.010,42.105)
C2: (-2.104,138.196,40.244)
N1: (-0.883,138.323,39.715)
N3: (-2.550,137.311,41.131)
N6: (1.297,137.585,39.574)
N7: (0.470,135.454,41.627)
N9: (-1.657,135.394,42.355)
O5': (-0.669,131.832,43.873)
O3': (-3.882,131.573,42.004)
Image (generated by PyMOL):