Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D60:D6
Extra
PDB:
ATOM 1 O3' C A 59 25.869 7.132 -83.011 1.00 52.97 O
ATOM 2 P U A 60 27.244 7.055 -83.843 1.00 59.52 P
ATOM 3 OP1 U A 60 27.742 8.443 -83.994 1.00 54.78 O
ATOM 4 OP2 U A 60 26.972 6.262 -85.065 1.00 55.76 O
ATOM 5 O5' U A 60 28.205 6.238 -82.871 1.00 49.12 O
ATOM 6 C5' U A 60 29.020 6.900 -81.915 1.00 48.83 C
ATOM 7 C4' U A 60 29.982 5.942 -81.261 1.00 52.47 C
ATOM 8 O4' U A 60 29.243 4.815 -80.713 1.00 48.12 O
ATOM 9 C3' U A 60 31.008 5.299 -82.184 1.00 58.61 C
ATOM 10 O3' U A 60 32.138 6.122 -82.426 1.00 62.23 O
ATOM 11 C2' U A 60 31.339 4.000 -81.464 1.00 52.89 C
ATOM 12 O2' U A 60 32.219 4.241 -80.375 1.00 49.54 O
ATOM 13 C1' U A 60 29.971 3.620 -80.903 1.00 46.89 C
ATOM 14 N1 U A 60 29.212 2.758 -81.836 1.00 41.66 N
ATOM 15 C2 U A 60 29.563 1.426 -81.936 1.00 45.45 C
ATOM 16 O2 U A 60 30.470 0.930 -81.291 1.00 44.42 O
ATOM 17 N3 U A 60 28.813 0.693 -82.825 1.00 41.40 N
ATOM 18 C4 U A 60 27.768 1.146 -83.607 1.00 44.08 C
ATOM 19 O4 U A 60 27.188 0.361 -84.361 1.00 47.56 O
ATOM 20 C5 U A 60 27.466 2.536 -83.446 1.00 43.68 C
ATOM 21 C6 U A 60 28.181 3.272 -82.587 1.00 44.05 C
ATOM 22 P A A 61 33.051 5.879 -83.729 1.00 62.35 P
ATOM 23 OP1 A A 61 34.024 6.992 -83.795 1.00 58.26 O
ATOM 24 OP2 A A 61 32.131 5.669 -84.874 1.00 44.92 O
ATOM 25 O5' A A 61 33.806 4.520 -83.386 1.00 57.34 O
TER
ATOM 1 O3' U B 5 31.710 -10.862 -85.569 1.00 57.25 O
ATOM 2 P A B 6 30.679 -11.351 -84.438 1.00 53.27 P
ATOM 3 OP1 A B 6 31.058 -12.736 -84.071 1.00 60.65 O
ATOM 4 OP2 A B 6 29.312 -11.099 -84.952 1.00 59.78 O
ATOM 5 O5' A B 6 30.992 -10.366 -83.230 1.00 56.08 O
ATOM 6 C5' A B 6 32.295 -10.287 -82.676 1.00 57.78 C
ATOM 7 C4' A B 6 32.420 -9.126 -81.723 1.00 52.47 C
ATOM 8 O4' A B 6 32.411 -7.880 -82.460 1.00 53.37 O
ATOM 9 C3' A B 6 31.293 -8.967 -80.717 1.00 48.72 C
ATOM 10 O3' A B 6 31.425 -9.838 -79.605 1.00 51.77 O
ATOM 11 C2' A B 6 31.374 -7.488 -80.350 1.00 48.38 C
ATOM 12 O2' A B 6 32.367 -7.268 -79.363 1.00 53.79 O
ATOM 13 C1' A B 6 31.852 -6.859 -81.662 1.00 46.63 C
ATOM 14 N9 A B 6 30.756 -6.210 -82.407 1.00 44.56 N
ATOM 15 C8 A B 6 29.768 -6.771 -83.176 1.00 44.48 C
ATOM 16 N7 A B 6 28.948 -5.888 -83.697 1.00 40.64 N
ATOM 17 C5 A B 6 29.428 -4.666 -83.241 1.00 41.70 C
ATOM 18 C6 A B 6 29.007 -3.335 -83.434 1.00 38.09 C
ATOM 19 N6 A B 6 27.952 -2.985 -84.171 1.00 40.88 N
ATOM 20 N1 A B 6 29.714 -2.355 -82.835 1.00 35.36 N
ATOM 21 C2 A B 6 30.773 -2.695 -82.093 1.00 38.48 C
ATOM 22 N3 A B 6 31.270 -3.902 -81.837 1.00 40.50 N
ATOM 23 C4 A B 6 30.543 -4.855 -82.448 1.00 42.44 C
ATOM 24 P U B 7 30.341 -10.998 -79.349 1.00 58.37 P
ATOM 25 OP1 U B 7 30.963 -11.981 -78.426 1.00 53.37 O
ATOM 26 OP2 U B 7 29.873 -11.465 -80.677 1.00 51.66 O
ATOM 27 O5' U B 7 29.169 -10.223 -78.604 1.00 50.29 O
TER
ATOM 2 P U A 60 27.244 7.055 -83.843 1.00 59.52 P
ATOM 3 OP1 U A 60 27.742 8.443 -83.994 1.00 54.78 O
ATOM 4 OP2 U A 60 26.972 6.262 -85.065 1.00 55.76 O
ATOM 5 O5' U A 60 28.205 6.238 -82.871 1.00 49.12 O
ATOM 6 C5' U A 60 29.020 6.900 -81.915 1.00 48.83 C
ATOM 7 C4' U A 60 29.982 5.942 -81.261 1.00 52.47 C
ATOM 8 O4' U A 60 29.243 4.815 -80.713 1.00 48.12 O
ATOM 9 C3' U A 60 31.008 5.299 -82.184 1.00 58.61 C
ATOM 10 O3' U A 60 32.138 6.122 -82.426 1.00 62.23 O
ATOM 11 C2' U A 60 31.339 4.000 -81.464 1.00 52.89 C
ATOM 12 O2' U A 60 32.219 4.241 -80.375 1.00 49.54 O
ATOM 13 C1' U A 60 29.971 3.620 -80.903 1.00 46.89 C
ATOM 14 N1 U A 60 29.212 2.758 -81.836 1.00 41.66 N
ATOM 15 C2 U A 60 29.563 1.426 -81.936 1.00 45.45 C
ATOM 16 O2 U A 60 30.470 0.930 -81.291 1.00 44.42 O
ATOM 17 N3 U A 60 28.813 0.693 -82.825 1.00 41.40 N
ATOM 18 C4 U A 60 27.768 1.146 -83.607 1.00 44.08 C
ATOM 19 O4 U A 60 27.188 0.361 -84.361 1.00 47.56 O
ATOM 20 C5 U A 60 27.466 2.536 -83.446 1.00 43.68 C
ATOM 21 C6 U A 60 28.181 3.272 -82.587 1.00 44.05 C
ATOM 22 P A A 61 33.051 5.879 -83.729 1.00 62.35 P
ATOM 23 OP1 A A 61 34.024 6.992 -83.795 1.00 58.26 O
ATOM 24 OP2 A A 61 32.131 5.669 -84.874 1.00 44.92 O
ATOM 25 O5' A A 61 33.806 4.520 -83.386 1.00 57.34 O
TER
ATOM 1 O3' U B 5 31.710 -10.862 -85.569 1.00 57.25 O
ATOM 2 P A B 6 30.679 -11.351 -84.438 1.00 53.27 P
ATOM 3 OP1 A B 6 31.058 -12.736 -84.071 1.00 60.65 O
ATOM 4 OP2 A B 6 29.312 -11.099 -84.952 1.00 59.78 O
ATOM 5 O5' A B 6 30.992 -10.366 -83.230 1.00 56.08 O
ATOM 6 C5' A B 6 32.295 -10.287 -82.676 1.00 57.78 C
ATOM 7 C4' A B 6 32.420 -9.126 -81.723 1.00 52.47 C
ATOM 8 O4' A B 6 32.411 -7.880 -82.460 1.00 53.37 O
ATOM 9 C3' A B 6 31.293 -8.967 -80.717 1.00 48.72 C
ATOM 10 O3' A B 6 31.425 -9.838 -79.605 1.00 51.77 O
ATOM 11 C2' A B 6 31.374 -7.488 -80.350 1.00 48.38 C
ATOM 12 O2' A B 6 32.367 -7.268 -79.363 1.00 53.79 O
ATOM 13 C1' A B 6 31.852 -6.859 -81.662 1.00 46.63 C
ATOM 14 N9 A B 6 30.756 -6.210 -82.407 1.00 44.56 N
ATOM 15 C8 A B 6 29.768 -6.771 -83.176 1.00 44.48 C
ATOM 16 N7 A B 6 28.948 -5.888 -83.697 1.00 40.64 N
ATOM 17 C5 A B 6 29.428 -4.666 -83.241 1.00 41.70 C
ATOM 18 C6 A B 6 29.007 -3.335 -83.434 1.00 38.09 C
ATOM 19 N6 A B 6 27.952 -2.985 -84.171 1.00 40.88 N
ATOM 20 N1 A B 6 29.714 -2.355 -82.835 1.00 35.36 N
ATOM 21 C2 A B 6 30.773 -2.695 -82.093 1.00 38.48 C
ATOM 22 N3 A B 6 31.270 -3.902 -81.837 1.00 40.50 N
ATOM 23 C4 A B 6 30.543 -4.855 -82.448 1.00 42.44 C
ATOM 24 P U B 7 30.341 -10.998 -79.349 1.00 58.37 P
ATOM 25 OP1 U B 7 30.963 -11.981 -78.426 1.00 53.37 O
ATOM 26 OP2 U B 7 29.873 -11.465 -80.677 1.00 51.66 O
ATOM 27 O5' U B 7 29.169 -10.223 -78.604 1.00 50.29 O
TER
Atoms:
C4: (27.768,1.146,-83.607)
N3: (28.813,0.693,-82.825)
OP1: (27.742,8.443,-83.994)
OP2: (26.972,6.262,-85.065)
C2: (29.563,1.426,-81.936)
C1': (29.971,3.620,-80.903)
C3': (31.008,5.299,-82.184)
O5': (28.205,6.238,-82.871)
O4': (29.243,4.815,-80.713)
C5': (29.020,6.900,-81.915)
P: (27.244,7.055,-83.843)
C4': (29.982,5.942,-81.261)
C2': (31.339,4.000,-81.464)
O2': (32.219,4.241,-80.375)
N1: (29.212,2.758,-81.836)
O4: (27.188,0.361,-84.361)
O2: (30.470,0.930,-81.291)
C6: (28.181,3.272,-82.587)
C5: (27.466,2.536,-83.446)
O3': (32.138,6.122,-82.426)
N3: (28.813,0.693,-82.825)
OP1: (27.742,8.443,-83.994)
OP2: (26.972,6.262,-85.065)
C2: (29.563,1.426,-81.936)
C1': (29.971,3.620,-80.903)
C3': (31.008,5.299,-82.184)
O5': (28.205,6.238,-82.871)
O4': (29.243,4.815,-80.713)
C5': (29.020,6.900,-81.915)
P: (27.244,7.055,-83.843)
C4': (29.982,5.942,-81.261)
C2': (31.339,4.000,-81.464)
O2': (32.219,4.241,-80.375)
N1: (29.212,2.758,-81.836)
O4: (27.188,0.361,-84.361)
O2: (30.470,0.930,-81.291)
C6: (28.181,3.272,-82.587)
C5: (27.466,2.536,-83.446)
O3': (32.138,6.122,-82.426)
OP1: (31.058,-12.736,-84.071)
OP2: (29.312,-11.099,-84.952)
C3': (31.293,-8.967,-80.717)
C1': (31.852,-6.859,-81.662)
C5': (32.295,-10.287,-82.676)
O4': (32.411,-7.880,-82.460)
C8: (29.768,-6.771,-83.176)
O2': (32.367,-7.268,-79.363)
C6: (29.007,-3.335,-83.434)
C5: (29.428,-4.666,-83.241)
C4: (30.543,-4.855,-82.448)
P: (30.679,-11.351,-84.438)
C4': (32.420,-9.126,-81.723)
C2': (31.374,-7.488,-80.350)
C2: (30.773,-2.695,-82.093)
N1: (29.714,-2.355,-82.835)
N3: (31.270,-3.902,-81.837)
N6: (27.952,-2.985,-84.171)
N7: (28.948,-5.888,-83.697)
N9: (30.756,-6.210,-82.407)
O5': (30.992,-10.366,-83.230)
O3': (31.425,-9.838,-79.605)
OP2: (29.312,-11.099,-84.952)
C3': (31.293,-8.967,-80.717)
C1': (31.852,-6.859,-81.662)
C5': (32.295,-10.287,-82.676)
O4': (32.411,-7.880,-82.460)
C8: (29.768,-6.771,-83.176)
O2': (32.367,-7.268,-79.363)
C6: (29.007,-3.335,-83.434)
C5: (29.428,-4.666,-83.241)
C4: (30.543,-4.855,-82.448)
P: (30.679,-11.351,-84.438)
C4': (32.420,-9.126,-81.723)
C2': (31.374,-7.488,-80.350)
C2: (30.773,-2.695,-82.093)
N1: (29.714,-2.355,-82.835)
N3: (31.270,-3.902,-81.837)
N6: (27.952,-2.985,-84.171)
N7: (28.948,-5.888,-83.697)
N9: (30.756,-6.210,-82.407)
O5': (30.992,-10.366,-83.230)
O3': (31.425,-9.838,-79.605)
Image (generated by PyMOL):