ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1559:1442

Extra

PDB:
ATOM 1 O3' C A 558 111.593 3.593 23.093 1.00 47.78 O
ATOM 2 P U A 559 111.895 4.576 24.340 1.00 47.50 P
ATOM 3 OP1 U A 559 113.296 5.073 24.143 1.00 47.96 O
ATOM 4 OP2 U A 559 111.543 3.834 25.576 1.00 47.12 O
ATOM 5 O5' U A 559 110.839 5.778 24.142 1.00 47.31 O
ATOM 6 C5' U A 559 110.852 6.586 22.974 1.00 47.60 C
ATOM 7 C4' U A 559 109.703 7.560 22.956 1.00 47.35 C
ATOM 8 O4' U A 559 108.446 6.842 22.791 1.00 47.00 O
ATOM 9 C3' U A 559 109.475 8.352 24.219 1.00 47.07 C
ATOM 10 O3' U A 559 110.389 9.412 24.407 1.00 47.36 O
ATOM 11 C2' U A 559 108.019 8.790 24.050 1.00 46.75 C
ATOM 12 O2' U A 559 107.908 9.782 23.037 1.00 47.01 O
ATOM 13 C1' U A 559 107.414 7.503 23.512 1.00 46.62 C
ATOM 14 N1 U A 559 106.972 6.634 24.606 1.00 46.23 N
ATOM 15 C2 U A 559 105.749 6.883 25.158 1.00 45.82 C
ATOM 16 O2 U A 559 105.062 7.752 24.748 1.00 45.78 O
ATOM 17 N3 U A 559 105.357 6.094 26.220 1.00 45.46 N
ATOM 18 C4 U A 559 106.124 5.066 26.766 1.00 45.49 C
ATOM 19 O4 U A 559 105.696 4.416 27.710 1.00 45.17 O
ATOM 20 C5 U A 559 107.389 4.858 26.142 1.00 45.93 C
ATOM 21 C6 U A 559 107.766 5.625 25.117 1.00 46.27 C
ATOM 22 P G A 560 110.622 10.016 25.883 1.00 50.75 P
ATOM 23 OP1 G A 560 111.765 10.941 25.808 1.00 51.16 O
ATOM 24 OP2 G A 560 110.683 8.883 26.822 1.00 50.50 O
ATOM 25 O5' G A 560 109.295 10.847 26.131 1.00 50.41 O
TER

ATOM 1 O3' C B 441 94.598 8.305 33.358 1.00 78.78 O
ATOM 2 P A B 442 94.092 7.398 32.104 1.00 60.61 P
ATOM 3 OP1 A B 442 92.572 7.499 32.098 1.00 60.31 O
ATOM 4 OP2 A B 442 94.749 6.018 32.196 1.00 60.64 O
ATOM 5 O5' A B 442 94.692 8.199 30.848 1.00 61.00 O
ATOM 6 C5' A B 442 95.572 7.587 29.915 1.00 61.31 C
ATOM 7 C4' A B 442 96.150 8.615 28.969 1.00 61.68 C
ATOM 8 O4' A B 442 97.394 9.124 29.506 1.00 61.88 O
ATOM 9 C3' A B 442 96.498 8.114 27.579 1.00 61.98 C
ATOM 10 O3' A B 442 95.420 8.263 26.700 1.00 61.94 O
ATOM 11 C2' A B 442 97.648 8.989 27.198 1.00 62.36 C
ATOM 12 O2' A B 442 97.153 10.256 26.846 1.00 62.43 O
ATOM 13 C1' A B 442 98.371 9.129 28.520 1.00 62.28 C
ATOM 14 N9 A B 442 99.297 8.003 28.780 1.00 62.35 N
ATOM 15 C8 A B 442 99.158 7.025 29.725 1.00 62.08 C
ATOM 16 N7 A B 442 100.139 6.161 29.739 1.00 62.25 N
ATOM 17 C5 A B 442 101.033 6.598 28.738 1.00 62.66 C
ATOM 18 C6 A B 442 102.286 6.126 28.233 1.00 63.03 C
ATOM 19 N6 A B 442 102.987 5.076 28.616 1.00 63.07 N
ATOM 20 N1 A B 442 102.858 6.786 27.241 1.00 63.39 N
ATOM 21 C2 A B 442 102.214 7.864 26.788 1.00 63.39 C
ATOM 22 N3 A B 442 101.070 8.418 27.157 1.00 63.09 N
ATOM 23 C4 A B 442 100.507 7.734 28.151 1.00 62.73 C
ATOM 24 P G B 443 95.090 7.168 25.571 1.00 44.76 P
ATOM 25 OP1 G B 443 93.707 7.507 25.087 1.00 44.61 O
ATOM 26 OP2 G B 443 95.335 5.835 26.150 1.00 44.61 O
ATOM 27 O5' G B 443 96.188 7.462 24.420 1.00 45.25 O
TER

Atoms:
C4: (106.124,5.066,26.766)
N3: (105.357,6.094,26.220)
OP1: (113.296,5.073,24.143)
OP2: (111.543,3.834,25.576)
C2: (105.749,6.883,25.158)
C1': (107.414,7.503,23.512)
C3': (109.475,8.352,24.219)
O5': (110.839,5.778,24.142)
O4': (108.446,6.842,22.791)
C5': (110.852,6.586,22.974)
P: (111.895,4.576,24.340)
C4': (109.703,7.560,22.956)
C2': (108.019,8.790,24.050)
O2': (107.908,9.782,23.037)
N1: (106.972,6.634,24.606)
O4: (105.696,4.416,27.710)
O2: (105.062,7.752,24.748)
C6: (107.766,5.625,25.117)
C5: (107.389,4.858,26.142)
O3': (110.389,9.412,24.407)
OP1: (92.572,7.499,32.098)
OP2: (94.749,6.018,32.196)
C3': (96.498,8.114,27.579)
C1': (98.371,9.129,28.520)
C5': (95.572,7.587,29.915)
O4': (97.394,9.124,29.506)
C8: (99.158,7.025,29.725)
O2': (97.153,10.256,26.846)
C6: (102.286,6.126,28.233)
C5: (101.033,6.598,28.738)
C4: (100.507,7.734,28.151)
P: (94.092,7.398,32.104)
C4': (96.150,8.615,28.969)
C2': (97.648,8.989,27.198)
C2: (102.214,7.864,26.788)
N1: (102.858,6.786,27.241)
N3: (101.070,8.418,27.157)
N6: (102.987,5.076,28.616)
N7: (100.139,6.161,29.739)
N9: (99.297,8.003,28.780)
O5': (94.692,8.199,30.848)
O3': (95.420,8.263,26.700)
Image (generated by PyMOL):
PyMOL image
show in jmol