ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3V7E:C85:C48

Extra

PDB:
ATOM 1 O3' G A 84 14.936 0.827 -13.904 1.00 72.45 O
ATOM 2 P U A 85 15.725 1.861 -14.814 1.00 75.89 P
ATOM 3 OP1 U A 85 15.330 1.721 -16.239 1.00 73.63 O
ATOM 4 OP2 U A 85 17.150 1.721 -14.426 1.00 76.80 O
ATOM 5 O5' U A 85 15.201 3.256 -14.267 1.00 71.45 O
ATOM 6 C5' U A 85 15.889 4.432 -14.594 1.00 64.41 C
ATOM 7 C4' U A 85 15.485 5.551 -13.689 1.00 57.82 C
ATOM 8 O4' U A 85 15.415 5.106 -12.315 1.00 61.38 O
ATOM 9 C3' U A 85 16.570 6.597 -13.688 1.00 63.77 C
ATOM 10 O3' U A 85 16.394 7.411 -14.813 1.00 64.83 O
ATOM 11 C2' U A 85 16.393 7.273 -12.345 1.00 63.57 C
ATOM 12 O2' U A 85 15.341 8.213 -12.344 1.00 58.48 O
ATOM 13 C1' U A 85 16.049 6.065 -11.474 1.00 65.67 C
ATOM 14 N1 U A 85 17.237 5.432 -10.886 1.00 71.15 N
ATOM 15 C2 U A 85 17.804 6.029 -9.786 1.00 75.60 C
ATOM 16 O2 U A 85 17.380 7.065 -9.307 1.00 87.27 O
ATOM 17 N3 U A 85 18.888 5.368 -9.265 1.00 73.62 N
ATOM 18 C4 U A 85 19.451 4.202 -9.729 1.00 68.64 C
ATOM 19 O4 U A 85 20.414 3.721 -9.138 1.00 66.68 O
ATOM 20 C5 U A 85 18.815 3.651 -10.879 1.00 70.79 C
ATOM 21 C6 U A 85 17.758 4.270 -11.408 1.00 75.24 C
ATOM 22 P G A 86 17.357 7.206 -16.073 1.00 66.70 P
ATOM 23 OP1 G A 86 16.506 7.358 -17.275 1.00 66.57 O
ATOM 24 OP2 G A 86 18.122 5.947 -15.875 1.00 64.44 O
ATOM 25 O5' G A 86 18.324 8.451 -15.896 1.00 61.87 O
TER

ATOM 1 O3' C B 47 27.706 8.871 -2.228 1.00 62.64 O
ATOM 2 P A B 48 26.354 8.640 -1.408 1.00 69.08 P
ATOM 3 OP1 A B 48 26.575 9.361 -0.122 1.00 65.43 O
ATOM 4 OP2 A B 48 26.037 7.182 -1.405 1.00 54.94 O
ATOM 5 O5' A B 48 25.240 9.378 -2.279 1.00 68.73 O
ATOM 6 C5' A B 48 25.218 10.802 -2.389 1.00 72.60 C
ATOM 7 C4' A B 48 23.985 11.260 -3.139 1.00 72.71 C
ATOM 8 O4' A B 48 24.058 10.811 -4.518 1.00 76.87 O
ATOM 9 C3' A B 48 22.655 10.713 -2.647 1.00 75.22 C
ATOM 10 O3' A B 48 22.158 11.467 -1.554 1.00 77.82 O
ATOM 11 C2' A B 48 21.776 10.877 -3.877 1.00 73.64 C
ATOM 12 O2' A B 48 21.345 12.208 -4.061 1.00 76.32 O
ATOM 13 C1' A B 48 22.755 10.498 -4.987 1.00 71.50 C
ATOM 14 N9 A B 48 22.719 9.072 -5.292 1.00 64.97 N
ATOM 15 C8 A B 48 23.388 8.053 -4.664 1.00 61.20 C
ATOM 16 N7 A B 48 23.171 6.875 -5.194 1.00 59.00 N
ATOM 17 C5 A B 48 22.296 7.136 -6.236 1.00 59.80 C
ATOM 18 C6 A B 48 21.690 6.308 -7.191 1.00 55.89 C
ATOM 19 N6 A B 48 21.885 4.995 -7.258 1.00 52.43 N
ATOM 20 N1 A B 48 20.865 6.884 -8.089 1.00 56.60 N
ATOM 21 C2 A B 48 20.668 8.204 -8.022 1.00 57.25 C
ATOM 22 N3 A B 48 21.186 9.090 -7.176 1.00 59.26 N
ATOM 23 C4 A B 48 22.001 8.484 -6.300 1.00 61.34 C
ATOM 24 P C B 49 21.061 10.822 -0.571 1.00 84.32 P
ATOM 25 OP1 C B 49 20.729 11.915 0.380 1.00 80.36 O
ATOM 26 OP2 C B 49 21.566 9.520 -0.048 1.00 76.60 O
ATOM 27 O5' C B 49 19.806 10.539 -1.519 1.00 76.13 O
TER

Atoms:
C4: (19.451,4.202,-9.729)
N3: (18.888,5.368,-9.265)
OP1: (15.330,1.721,-16.239)
OP2: (17.150,1.721,-14.426)
C2: (17.804,6.029,-9.786)
C1': (16.049,6.065,-11.474)
C3': (16.570,6.597,-13.688)
O5': (15.201,3.256,-14.267)
O4': (15.415,5.106,-12.315)
C5': (15.889,4.432,-14.594)
P: (15.725,1.861,-14.814)
C4': (15.485,5.551,-13.689)
C2': (16.393,7.273,-12.345)
O2': (15.341,8.213,-12.344)
N1: (17.237,5.432,-10.886)
O4: (20.414,3.721,-9.138)
O2: (17.380,7.065,-9.307)
C6: (17.758,4.270,-11.408)
C5: (18.815,3.651,-10.879)
O3': (16.394,7.411,-14.813)
OP1: (26.575,9.361,-0.122)
OP2: (26.037,7.182,-1.405)
C3': (22.655,10.713,-2.647)
C1': (22.755,10.498,-4.987)
C5': (25.218,10.802,-2.389)
O4': (24.058,10.811,-4.518)
C8: (23.388,8.053,-4.664)
O2': (21.345,12.208,-4.061)
C6: (21.690,6.308,-7.191)
C5: (22.296,7.136,-6.236)
C4: (22.001,8.484,-6.300)
P: (26.354,8.640,-1.408)
C4': (23.985,11.260,-3.139)
C2': (21.776,10.877,-3.877)
C2: (20.668,8.204,-8.022)
N1: (20.865,6.884,-8.089)
N3: (21.186,9.090,-7.176)
N6: (21.885,4.995,-7.258)
N7: (23.171,6.875,-5.194)
N9: (22.719,9.072,-5.292)
O5': (25.240,9.378,-2.279)
O3': (22.158,11.467,-1.554)
Image (generated by PyMOL):
PyMOL image
show in jmol