Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9V:A6:A65
Extra
PDB:
ATOM 1 O3' U A 5 11.578 2.463 -5.494 1.00 41.70 O
ATOM 2 P U A 6 12.349 1.097 -4.926 1.00 33.26 P
ATOM 3 OP1 U A 6 13.221 1.712 -3.893 1.00 36.81 O
ATOM 4 OP2 U A 6 12.940 0.103 -5.867 1.00 33.13 O
ATOM 5 O5' U A 6 11.235 0.229 -4.181 1.00 34.99 O
ATOM 6 C5' U A 6 10.412 0.802 -3.171 1.00 32.14 C
ATOM 7 C4' U A 6 9.214 -0.081 -2.885 1.00 30.68 C
ATOM 8 O4' U A 6 8.410 -0.226 -4.087 1.00 30.95 O
ATOM 9 C3' U A 6 9.487 -1.488 -2.375 1.00 29.90 C
ATOM 10 O3' U A 6 8.568 -1.716 -1.317 1.00 29.86 O
ATOM 11 C2' U A 6 9.218 -2.365 -3.607 1.00 31.07 C
ATOM 12 O2' U A 6 8.740 -3.693 -3.395 1.00 30.76 O
ATOM 13 C1' U A 6 8.110 -1.594 -4.299 1.00 31.32 C
ATOM 14 N1 U A 6 8.066 -1.879 -5.743 1.00 29.61 N
ATOM 15 C2 U A 6 6.972 -2.570 -6.229 1.00 28.86 C
ATOM 16 O2 U A 6 6.034 -2.912 -5.536 1.00 28.52 O
ATOM 17 N3 U A 6 7.017 -2.842 -7.562 1.00 30.74 N
ATOM 18 C4 U A 6 8.016 -2.505 -8.441 1.00 29.96 C
ATOM 19 O4 U A 6 8.000 -2.980 -9.569 1.00 31.28 O
ATOM 20 C5 U A 6 9.082 -1.764 -7.873 1.00 28.66 C
ATOM 21 C6 U A 6 9.075 -1.485 -6.576 1.00 27.78 C
ATOM 22 P U A 7 8.910 -1.171 0.175 1.00 29.64 P
ATOM 23 OP1 U A 7 7.815 -1.657 1.044 1.00 26.35 O
ATOM 24 OP2 U A 7 9.222 0.268 0.084 1.00 28.99 O
ATOM 25 O5' U A 7 10.209 -1.982 0.526 1.00 29.68 O
TER
ATOM 1 O3' G B 64 -0.695 -8.943 -14.410 1.00 38.12 O
ATOM 2 P A B 65 -1.087 -7.384 -14.266 1.00 38.61 P
ATOM 3 OP1 A B 65 -2.500 -7.295 -14.734 1.00 40.06 O
ATOM 4 OP2 A B 65 -0.048 -6.603 -14.959 1.00 37.00 O
ATOM 5 O5' A B 65 -1.039 -7.079 -12.693 1.00 35.93 O
ATOM 6 C5' A B 65 -1.956 -7.705 -11.790 1.00 35.80 C
ATOM 7 C4' A B 65 -1.662 -7.299 -10.358 1.00 37.86 C
ATOM 8 O4' A B 65 -0.347 -7.783 -9.967 1.00 38.71 O
ATOM 9 C3' A B 65 -1.585 -5.806 -10.074 1.00 38.47 C
ATOM 10 O3' A B 65 -2.858 -5.242 -9.848 1.00 41.70 O
ATOM 11 C2' A B 65 -0.741 -5.740 -8.813 1.00 37.35 C
ATOM 12 O2' A B 65 -1.501 -6.046 -7.662 1.00 37.41 O
ATOM 13 C1' A B 65 0.269 -6.851 -9.084 1.00 35.33 C
ATOM 14 N9 A B 65 1.493 -6.356 -9.709 1.00 32.21 N
ATOM 15 C8 A B 65 1.921 -6.424 -11.022 1.00 31.36 C
ATOM 16 N7 A B 65 3.098 -5.874 -11.222 1.00 30.62 N
ATOM 17 C5 A B 65 3.466 -5.420 -9.958 1.00 31.19 C
ATOM 18 C6 A B 65 4.624 -4.789 -9.469 1.00 30.47 C
ATOM 19 N6 A B 65 5.669 -4.460 -10.219 1.00 28.58 N
ATOM 20 N1 A B 65 4.674 -4.513 -8.149 1.00 30.96 N
ATOM 21 C2 A B 65 3.631 -4.844 -7.384 1.00 31.44 C
ATOM 22 N3 A B 65 2.499 -5.435 -7.717 1.00 30.50 N
ATOM 23 C4 A B 65 2.480 -5.706 -9.027 1.00 31.30 C
ATOM 24 P A B 66 -3.119 -3.719 -10.263 1.00 43.33 P
ATOM 25 OP1 A B 66 -4.593 -3.572 -10.126 1.00 44.47 O
ATOM 26 OP2 A B 66 -2.454 -3.408 -11.560 1.00 42.51 O
ATOM 27 O5' A B 66 -2.364 -2.881 -9.150 1.00 41.78 O
TER
ATOM 2 P U A 6 12.349 1.097 -4.926 1.00 33.26 P
ATOM 3 OP1 U A 6 13.221 1.712 -3.893 1.00 36.81 O
ATOM 4 OP2 U A 6 12.940 0.103 -5.867 1.00 33.13 O
ATOM 5 O5' U A 6 11.235 0.229 -4.181 1.00 34.99 O
ATOM 6 C5' U A 6 10.412 0.802 -3.171 1.00 32.14 C
ATOM 7 C4' U A 6 9.214 -0.081 -2.885 1.00 30.68 C
ATOM 8 O4' U A 6 8.410 -0.226 -4.087 1.00 30.95 O
ATOM 9 C3' U A 6 9.487 -1.488 -2.375 1.00 29.90 C
ATOM 10 O3' U A 6 8.568 -1.716 -1.317 1.00 29.86 O
ATOM 11 C2' U A 6 9.218 -2.365 -3.607 1.00 31.07 C
ATOM 12 O2' U A 6 8.740 -3.693 -3.395 1.00 30.76 O
ATOM 13 C1' U A 6 8.110 -1.594 -4.299 1.00 31.32 C
ATOM 14 N1 U A 6 8.066 -1.879 -5.743 1.00 29.61 N
ATOM 15 C2 U A 6 6.972 -2.570 -6.229 1.00 28.86 C
ATOM 16 O2 U A 6 6.034 -2.912 -5.536 1.00 28.52 O
ATOM 17 N3 U A 6 7.017 -2.842 -7.562 1.00 30.74 N
ATOM 18 C4 U A 6 8.016 -2.505 -8.441 1.00 29.96 C
ATOM 19 O4 U A 6 8.000 -2.980 -9.569 1.00 31.28 O
ATOM 20 C5 U A 6 9.082 -1.764 -7.873 1.00 28.66 C
ATOM 21 C6 U A 6 9.075 -1.485 -6.576 1.00 27.78 C
ATOM 22 P U A 7 8.910 -1.171 0.175 1.00 29.64 P
ATOM 23 OP1 U A 7 7.815 -1.657 1.044 1.00 26.35 O
ATOM 24 OP2 U A 7 9.222 0.268 0.084 1.00 28.99 O
ATOM 25 O5' U A 7 10.209 -1.982 0.526 1.00 29.68 O
TER
ATOM 1 O3' G B 64 -0.695 -8.943 -14.410 1.00 38.12 O
ATOM 2 P A B 65 -1.087 -7.384 -14.266 1.00 38.61 P
ATOM 3 OP1 A B 65 -2.500 -7.295 -14.734 1.00 40.06 O
ATOM 4 OP2 A B 65 -0.048 -6.603 -14.959 1.00 37.00 O
ATOM 5 O5' A B 65 -1.039 -7.079 -12.693 1.00 35.93 O
ATOM 6 C5' A B 65 -1.956 -7.705 -11.790 1.00 35.80 C
ATOM 7 C4' A B 65 -1.662 -7.299 -10.358 1.00 37.86 C
ATOM 8 O4' A B 65 -0.347 -7.783 -9.967 1.00 38.71 O
ATOM 9 C3' A B 65 -1.585 -5.806 -10.074 1.00 38.47 C
ATOM 10 O3' A B 65 -2.858 -5.242 -9.848 1.00 41.70 O
ATOM 11 C2' A B 65 -0.741 -5.740 -8.813 1.00 37.35 C
ATOM 12 O2' A B 65 -1.501 -6.046 -7.662 1.00 37.41 O
ATOM 13 C1' A B 65 0.269 -6.851 -9.084 1.00 35.33 C
ATOM 14 N9 A B 65 1.493 -6.356 -9.709 1.00 32.21 N
ATOM 15 C8 A B 65 1.921 -6.424 -11.022 1.00 31.36 C
ATOM 16 N7 A B 65 3.098 -5.874 -11.222 1.00 30.62 N
ATOM 17 C5 A B 65 3.466 -5.420 -9.958 1.00 31.19 C
ATOM 18 C6 A B 65 4.624 -4.789 -9.469 1.00 30.47 C
ATOM 19 N6 A B 65 5.669 -4.460 -10.219 1.00 28.58 N
ATOM 20 N1 A B 65 4.674 -4.513 -8.149 1.00 30.96 N
ATOM 21 C2 A B 65 3.631 -4.844 -7.384 1.00 31.44 C
ATOM 22 N3 A B 65 2.499 -5.435 -7.717 1.00 30.50 N
ATOM 23 C4 A B 65 2.480 -5.706 -9.027 1.00 31.30 C
ATOM 24 P A B 66 -3.119 -3.719 -10.263 1.00 43.33 P
ATOM 25 OP1 A B 66 -4.593 -3.572 -10.126 1.00 44.47 O
ATOM 26 OP2 A B 66 -2.454 -3.408 -11.560 1.00 42.51 O
ATOM 27 O5' A B 66 -2.364 -2.881 -9.150 1.00 41.78 O
TER
Atoms:
C4: (8.016,-2.505,-8.441)
N3: (7.017,-2.842,-7.562)
OP1: (13.221,1.712,-3.893)
OP2: (12.940,0.103,-5.867)
C2: (6.972,-2.570,-6.229)
C1': (8.110,-1.594,-4.299)
C3': (9.487,-1.488,-2.375)
O5': (11.235,0.229,-4.181)
O4': (8.410,-0.226,-4.087)
C5': (10.412,0.802,-3.171)
P: (12.349,1.097,-4.926)
C4': (9.214,-0.081,-2.885)
C2': (9.218,-2.365,-3.607)
O2': (8.740,-3.693,-3.395)
N1: (8.066,-1.879,-5.743)
O4: (8.000,-2.980,-9.569)
O2: (6.034,-2.912,-5.536)
C6: (9.075,-1.485,-6.576)
C5: (9.082,-1.764,-7.873)
O3': (8.568,-1.716,-1.317)
N3: (7.017,-2.842,-7.562)
OP1: (13.221,1.712,-3.893)
OP2: (12.940,0.103,-5.867)
C2: (6.972,-2.570,-6.229)
C1': (8.110,-1.594,-4.299)
C3': (9.487,-1.488,-2.375)
O5': (11.235,0.229,-4.181)
O4': (8.410,-0.226,-4.087)
C5': (10.412,0.802,-3.171)
P: (12.349,1.097,-4.926)
C4': (9.214,-0.081,-2.885)
C2': (9.218,-2.365,-3.607)
O2': (8.740,-3.693,-3.395)
N1: (8.066,-1.879,-5.743)
O4: (8.000,-2.980,-9.569)
O2: (6.034,-2.912,-5.536)
C6: (9.075,-1.485,-6.576)
C5: (9.082,-1.764,-7.873)
O3': (8.568,-1.716,-1.317)
OP1: (-2.500,-7.295,-14.734)
OP2: (-0.048,-6.603,-14.959)
C3': (-1.585,-5.806,-10.074)
C1': (0.269,-6.851,-9.084)
C5': (-1.956,-7.705,-11.790)
O4': (-0.347,-7.783,-9.967)
C8: (1.921,-6.424,-11.022)
O2': (-1.501,-6.046,-7.662)
C6: (4.624,-4.789,-9.469)
C5: (3.466,-5.420,-9.958)
C4: (2.480,-5.706,-9.027)
P: (-1.087,-7.384,-14.266)
C4': (-1.662,-7.299,-10.358)
C2': (-0.741,-5.740,-8.813)
C2: (3.631,-4.844,-7.384)
N1: (4.674,-4.513,-8.149)
N3: (2.499,-5.435,-7.717)
N6: (5.669,-4.460,-10.219)
N7: (3.098,-5.874,-11.222)
N9: (1.493,-6.356,-9.709)
O5': (-1.039,-7.079,-12.693)
O3': (-2.858,-5.242,-9.848)
OP2: (-0.048,-6.603,-14.959)
C3': (-1.585,-5.806,-10.074)
C1': (0.269,-6.851,-9.084)
C5': (-1.956,-7.705,-11.790)
O4': (-0.347,-7.783,-9.967)
C8: (1.921,-6.424,-11.022)
O2': (-1.501,-6.046,-7.662)
C6: (4.624,-4.789,-9.469)
C5: (3.466,-5.420,-9.958)
C4: (2.480,-5.706,-9.027)
P: (-1.087,-7.384,-14.266)
C4': (-1.662,-7.299,-10.358)
C2': (-0.741,-5.740,-8.813)
C2: (3.631,-4.844,-7.384)
N1: (4.674,-4.513,-8.149)
N3: (2.499,-5.435,-7.717)
N6: (5.669,-4.460,-10.219)
N7: (3.098,-5.874,-11.222)
N9: (1.493,-6.356,-9.709)
O5': (-1.039,-7.079,-12.693)
O3': (-2.858,-5.242,-9.848)
Image (generated by PyMOL):