ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A781:A697

Extra

PDB:
ATOM 1 O3' C A 780 47.938 -34.912 -38.634 1.00 31.07 O
ATOM 2 P U A 781 49.093 -36.013 -38.813 1.00 45.57 P
ATOM 3 OP1 U A 781 49.395 -36.018 -40.265 1.00 46.56 O
ATOM 4 OP2 U A 781 48.729 -37.295 -38.151 1.00 29.73 O
ATOM 5 O5' U A 781 50.312 -35.430 -37.947 1.00 42.24 O
ATOM 6 C5' U A 781 50.816 -34.095 -38.129 1.00 39.74 C
ATOM 7 C4' U A 781 51.863 -33.779 -37.079 1.00 38.38 C
ATOM 8 O4' U A 781 51.251 -33.530 -35.797 1.00 37.23 O
ATOM 9 C3' U A 781 52.874 -34.880 -36.836 1.00 35.46 C
ATOM 10 O3' U A 781 53.952 -34.684 -37.728 1.00 39.83 O
ATOM 11 C2' U A 781 53.328 -34.644 -35.403 1.00 36.95 C
ATOM 12 O2' U A 781 54.417 -33.769 -35.303 1.00 39.60 O
ATOM 13 C1' U A 781 52.102 -33.989 -34.769 1.00 34.67 C
ATOM 14 N1 U A 781 51.359 -34.928 -33.920 1.00 36.72 N
ATOM 15 C2 U A 781 51.868 -35.192 -32.658 1.00 39.23 C
ATOM 16 O2 U A 781 52.866 -34.653 -32.210 1.00 42.99 O
ATOM 17 N3 U A 781 51.164 -36.113 -31.936 1.00 39.20 N
ATOM 18 C4 U A 781 50.037 -36.769 -32.327 1.00 42.32 C
ATOM 19 O4 U A 781 49.555 -37.611 -31.585 1.00 44.18 O
ATOM 20 C5 U A 781 49.558 -36.424 -33.629 1.00 43.83 C
ATOM 21 C6 U A 781 50.219 -35.538 -34.362 1.00 42.27 C
ATOM 22 P A A 782 54.490 -35.904 -38.593 1.00 44.52 P
ATOM 23 OP1 A A 782 55.615 -35.431 -39.448 1.00 36.04 O
ATOM 24 OP2 A A 782 53.281 -36.462 -39.219 1.00 35.40 O
ATOM 25 O5' A A 782 55.054 -36.897 -37.481 1.00 46.14 O
TER

ATOM 1 O3' U B 696 51.800 -39.483 -20.231 1.00 35.66 O
ATOM 2 P A B 697 51.005 -38.086 -20.125 1.00 44.19 P
ATOM 3 OP1 A B 697 51.093 -37.577 -18.712 1.00 33.01 O
ATOM 4 OP2 A B 697 49.658 -38.239 -20.758 1.00 47.52 O
ATOM 5 O5' A B 697 51.850 -37.161 -21.106 1.00 37.29 O
ATOM 6 C5' A B 697 53.271 -37.160 -21.060 1.00 39.52 C
ATOM 7 C4' A B 697 53.804 -36.193 -22.073 1.00 39.58 C
ATOM 8 O4' A B 697 54.092 -36.879 -23.311 1.00 37.82 O
ATOM 9 C3' A B 697 52.843 -35.093 -22.482 1.00 39.37 C
ATOM 10 O3' A B 697 52.789 -34.022 -21.551 1.00 35.91 O
ATOM 11 C2' A B 697 53.399 -34.664 -23.825 1.00 36.59 C
ATOM 12 O2' A B 697 54.484 -33.788 -23.671 1.00 37.95 O
ATOM 13 C1' A B 697 53.913 -35.984 -24.388 1.00 35.39 C
ATOM 14 N9 A B 697 52.961 -36.547 -25.340 1.00 37.00 N
ATOM 15 C8 A B 697 51.941 -37.437 -25.131 1.00 39.42 C
ATOM 16 N7 A B 697 51.249 -37.704 -26.215 1.00 39.19 N
ATOM 17 C5 A B 697 51.855 -36.935 -27.198 1.00 36.24 C
ATOM 18 C6 A B 697 51.579 -36.756 -28.559 1.00 39.56 C
ATOM 19 N6 A B 697 50.574 -37.342 -29.190 1.00 41.07 N
ATOM 20 N1 A B 697 52.385 -35.934 -29.260 1.00 44.78 N
ATOM 21 C2 A B 697 53.396 -35.326 -28.620 1.00 43.05 C
ATOM 22 N3 A B 697 53.748 -35.404 -27.344 1.00 41.02 N
ATOM 23 C4 A B 697 52.923 -36.234 -26.678 1.00 39.83 C
ATOM 24 P G B 698 51.435 -33.166 -21.408 1.00 35.13 P
ATOM 25 OP1 G B 698 51.634 -32.270 -20.243 1.00 31.24 O
ATOM 26 OP2 G B 698 50.251 -34.083 -21.430 1.00 38.99 O
ATOM 27 O5' G B 698 51.390 -32.334 -22.770 1.00 31.34 O
TER

Atoms:
C4: (50.037,-36.769,-32.327)
N3: (51.164,-36.113,-31.936)
OP1: (49.395,-36.018,-40.265)
OP2: (48.729,-37.295,-38.151)
C2: (51.868,-35.192,-32.658)
C1': (52.102,-33.989,-34.769)
C3': (52.874,-34.880,-36.836)
O5': (50.312,-35.430,-37.947)
O4': (51.251,-33.530,-35.797)
C5': (50.816,-34.095,-38.129)
P: (49.093,-36.013,-38.813)
C4': (51.863,-33.779,-37.079)
C2': (53.328,-34.644,-35.403)
O2': (54.417,-33.769,-35.303)
N1: (51.359,-34.928,-33.920)
O4: (49.555,-37.611,-31.585)
O2: (52.866,-34.653,-32.210)
C6: (50.219,-35.538,-34.362)
C5: (49.558,-36.424,-33.629)
O3': (53.952,-34.684,-37.728)
OP1: (51.093,-37.577,-18.712)
OP2: (49.658,-38.239,-20.758)
C3': (52.843,-35.093,-22.482)
C1': (53.913,-35.984,-24.388)
C5': (53.271,-37.160,-21.060)
O4': (54.092,-36.879,-23.311)
C8: (51.941,-37.437,-25.131)
O2': (54.484,-33.788,-23.671)
C6: (51.579,-36.756,-28.559)
C5: (51.855,-36.935,-27.198)
C4: (52.923,-36.234,-26.678)
P: (51.005,-38.086,-20.125)
C4': (53.804,-36.193,-22.073)
C2': (53.399,-34.664,-23.825)
C2: (53.396,-35.326,-28.620)
N1: (52.385,-35.934,-29.260)
N3: (53.748,-35.404,-27.344)
N6: (50.574,-37.342,-29.190)
N7: (51.249,-37.704,-26.215)
N9: (52.961,-36.547,-25.340)
O5': (51.850,-37.161,-21.106)
O3': (52.789,-34.022,-21.551)
Image (generated by PyMOL):
PyMOL image
show in jmol