Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0536:0596
Extra
PDB:
ATOM 1 O3' A A 535 5.653 138.185 92.299 1.00 59.17 O
ATOM 2 P U A 536 4.242 138.064 91.535 1.00 60.87 P
ATOM 3 OP1 U A 536 3.797 139.459 91.226 1.00 59.90 O
ATOM 4 OP2 U A 536 3.356 137.165 92.324 1.00 59.39 O
ATOM 5 O5' U A 536 4.597 137.334 90.162 1.00 58.91 O
ATOM 6 C5' U A 536 5.562 137.902 89.266 1.00 57.57 C
ATOM 7 C4' U A 536 5.714 137.041 88.036 1.00 59.02 C
ATOM 8 O4' U A 536 6.148 135.706 88.437 1.00 59.04 O
ATOM 9 C3' U A 536 4.465 136.846 87.172 1.00 59.25 C
ATOM 10 O3' U A 536 4.858 136.736 85.805 1.00 61.48 O
ATOM 11 C2' U A 536 3.962 135.480 87.629 1.00 57.85 C
ATOM 12 O2' U A 536 3.216 134.805 86.639 1.00 57.73 O
ATOM 13 C1' U A 536 5.281 134.748 87.865 1.00 56.73 C
ATOM 14 N1 U A 536 5.177 133.578 88.750 1.00 53.96 N
ATOM 15 C2 U A 536 5.534 132.355 88.215 1.00 53.68 C
ATOM 16 O2 U A 536 5.983 132.231 87.090 1.00 55.30 O
ATOM 17 N3 U A 536 5.347 131.278 89.045 1.00 52.75 N
ATOM 18 C4 U A 536 4.861 131.298 90.334 1.00 52.23 C
ATOM 19 O4 U A 536 4.728 130.235 90.943 1.00 50.50 O
ATOM 20 C5 U A 536 4.553 132.604 90.836 1.00 50.71 C
ATOM 21 C6 U A 536 4.718 133.674 90.048 1.00 52.14 C
ATOM 22 P A A 537 4.654 137.973 84.797 1.00 63.76 P
ATOM 23 OP1 A A 537 5.756 137.882 83.801 1.00 62.43 O
ATOM 24 OP2 A A 537 4.471 139.228 85.585 1.00 62.16 O
ATOM 25 O5' A A 537 3.299 137.646 84.022 1.00 63.42 O
TER
ATOM 1 O3' G B 595 5.947 119.806 87.765 1.00 49.36 O
ATOM 2 P A B 596 7.432 120.245 88.186 1.00 48.20 P
ATOM 3 OP1 A B 596 8.328 119.087 87.945 1.00 47.68 O
ATOM 4 OP2 A B 596 7.368 120.865 89.534 1.00 47.14 O
ATOM 5 O5' A B 596 7.788 121.411 87.160 1.00 49.39 O
ATOM 6 C5' A B 596 7.957 121.149 85.758 1.00 46.19 C
ATOM 7 C4' A B 596 8.137 122.449 85.011 1.00 47.26 C
ATOM 8 O4' A B 596 6.928 123.247 85.116 1.00 49.22 O
ATOM 9 C3' A B 596 9.211 123.376 85.551 1.00 48.06 C
ATOM 10 O3' A B 596 10.505 122.994 85.120 1.00 49.81 O
ATOM 11 C2' A B 596 8.779 124.714 84.981 1.00 48.55 C
ATOM 12 O2' A B 596 9.076 124.800 83.596 1.00 48.10 O
ATOM 13 C1' A B 596 7.264 124.628 85.174 1.00 46.76 C
ATOM 14 N9 A B 596 6.817 125.144 86.470 1.00 44.93 N
ATOM 15 C8 A B 596 6.568 124.413 87.608 1.00 44.83 C
ATOM 16 N7 A B 596 6.157 125.139 88.621 1.00 43.47 N
ATOM 17 C5 A B 596 6.137 126.431 88.121 1.00 41.20 C
ATOM 18 C6 A B 596 5.786 127.654 88.701 1.00 42.91 C
ATOM 19 N6 A B 596 5.370 127.779 89.968 1.00 44.21 N
ATOM 20 N1 A B 596 5.874 128.763 87.934 1.00 42.86 N
ATOM 21 C2 A B 596 6.290 128.634 86.675 1.00 42.80 C
ATOM 22 N3 A B 596 6.652 127.535 86.016 1.00 43.94 N
ATOM 23 C4 A B 596 6.549 126.453 86.803 1.00 42.80 C
ATOM 24 P U B 597 11.773 123.310 86.052 1.00 50.44 P
ATOM 25 OP1 U B 597 12.934 122.687 85.380 1.00 51.26 O
ATOM 26 OP2 U B 597 11.463 122.955 87.463 1.00 51.05 O
ATOM 27 O5' U B 597 11.918 124.891 85.958 1.00 49.95 O
TER
ATOM 2 P U A 536 4.242 138.064 91.535 1.00 60.87 P
ATOM 3 OP1 U A 536 3.797 139.459 91.226 1.00 59.90 O
ATOM 4 OP2 U A 536 3.356 137.165 92.324 1.00 59.39 O
ATOM 5 O5' U A 536 4.597 137.334 90.162 1.00 58.91 O
ATOM 6 C5' U A 536 5.562 137.902 89.266 1.00 57.57 C
ATOM 7 C4' U A 536 5.714 137.041 88.036 1.00 59.02 C
ATOM 8 O4' U A 536 6.148 135.706 88.437 1.00 59.04 O
ATOM 9 C3' U A 536 4.465 136.846 87.172 1.00 59.25 C
ATOM 10 O3' U A 536 4.858 136.736 85.805 1.00 61.48 O
ATOM 11 C2' U A 536 3.962 135.480 87.629 1.00 57.85 C
ATOM 12 O2' U A 536 3.216 134.805 86.639 1.00 57.73 O
ATOM 13 C1' U A 536 5.281 134.748 87.865 1.00 56.73 C
ATOM 14 N1 U A 536 5.177 133.578 88.750 1.00 53.96 N
ATOM 15 C2 U A 536 5.534 132.355 88.215 1.00 53.68 C
ATOM 16 O2 U A 536 5.983 132.231 87.090 1.00 55.30 O
ATOM 17 N3 U A 536 5.347 131.278 89.045 1.00 52.75 N
ATOM 18 C4 U A 536 4.861 131.298 90.334 1.00 52.23 C
ATOM 19 O4 U A 536 4.728 130.235 90.943 1.00 50.50 O
ATOM 20 C5 U A 536 4.553 132.604 90.836 1.00 50.71 C
ATOM 21 C6 U A 536 4.718 133.674 90.048 1.00 52.14 C
ATOM 22 P A A 537 4.654 137.973 84.797 1.00 63.76 P
ATOM 23 OP1 A A 537 5.756 137.882 83.801 1.00 62.43 O
ATOM 24 OP2 A A 537 4.471 139.228 85.585 1.00 62.16 O
ATOM 25 O5' A A 537 3.299 137.646 84.022 1.00 63.42 O
TER
ATOM 1 O3' G B 595 5.947 119.806 87.765 1.00 49.36 O
ATOM 2 P A B 596 7.432 120.245 88.186 1.00 48.20 P
ATOM 3 OP1 A B 596 8.328 119.087 87.945 1.00 47.68 O
ATOM 4 OP2 A B 596 7.368 120.865 89.534 1.00 47.14 O
ATOM 5 O5' A B 596 7.788 121.411 87.160 1.00 49.39 O
ATOM 6 C5' A B 596 7.957 121.149 85.758 1.00 46.19 C
ATOM 7 C4' A B 596 8.137 122.449 85.011 1.00 47.26 C
ATOM 8 O4' A B 596 6.928 123.247 85.116 1.00 49.22 O
ATOM 9 C3' A B 596 9.211 123.376 85.551 1.00 48.06 C
ATOM 10 O3' A B 596 10.505 122.994 85.120 1.00 49.81 O
ATOM 11 C2' A B 596 8.779 124.714 84.981 1.00 48.55 C
ATOM 12 O2' A B 596 9.076 124.800 83.596 1.00 48.10 O
ATOM 13 C1' A B 596 7.264 124.628 85.174 1.00 46.76 C
ATOM 14 N9 A B 596 6.817 125.144 86.470 1.00 44.93 N
ATOM 15 C8 A B 596 6.568 124.413 87.608 1.00 44.83 C
ATOM 16 N7 A B 596 6.157 125.139 88.621 1.00 43.47 N
ATOM 17 C5 A B 596 6.137 126.431 88.121 1.00 41.20 C
ATOM 18 C6 A B 596 5.786 127.654 88.701 1.00 42.91 C
ATOM 19 N6 A B 596 5.370 127.779 89.968 1.00 44.21 N
ATOM 20 N1 A B 596 5.874 128.763 87.934 1.00 42.86 N
ATOM 21 C2 A B 596 6.290 128.634 86.675 1.00 42.80 C
ATOM 22 N3 A B 596 6.652 127.535 86.016 1.00 43.94 N
ATOM 23 C4 A B 596 6.549 126.453 86.803 1.00 42.80 C
ATOM 24 P U B 597 11.773 123.310 86.052 1.00 50.44 P
ATOM 25 OP1 U B 597 12.934 122.687 85.380 1.00 51.26 O
ATOM 26 OP2 U B 597 11.463 122.955 87.463 1.00 51.05 O
ATOM 27 O5' U B 597 11.918 124.891 85.958 1.00 49.95 O
TER
Atoms:
C4: (4.861,131.298,90.334)
N3: (5.347,131.278,89.045)
OP1: (3.797,139.459,91.226)
OP2: (3.356,137.165,92.324)
C2: (5.534,132.355,88.215)
C1': (5.281,134.748,87.865)
C3': (4.465,136.846,87.172)
O5': (4.597,137.334,90.162)
O4': (6.148,135.706,88.437)
C5': (5.562,137.902,89.266)
P: (4.242,138.064,91.535)
C4': (5.714,137.041,88.036)
C2': (3.962,135.480,87.629)
O2': (3.216,134.805,86.639)
N1: (5.177,133.578,88.750)
O4: (4.728,130.235,90.943)
O2: (5.983,132.231,87.090)
C6: (4.718,133.674,90.048)
C5: (4.553,132.604,90.836)
O3': (4.858,136.736,85.805)
N3: (5.347,131.278,89.045)
OP1: (3.797,139.459,91.226)
OP2: (3.356,137.165,92.324)
C2: (5.534,132.355,88.215)
C1': (5.281,134.748,87.865)
C3': (4.465,136.846,87.172)
O5': (4.597,137.334,90.162)
O4': (6.148,135.706,88.437)
C5': (5.562,137.902,89.266)
P: (4.242,138.064,91.535)
C4': (5.714,137.041,88.036)
C2': (3.962,135.480,87.629)
O2': (3.216,134.805,86.639)
N1: (5.177,133.578,88.750)
O4: (4.728,130.235,90.943)
O2: (5.983,132.231,87.090)
C6: (4.718,133.674,90.048)
C5: (4.553,132.604,90.836)
O3': (4.858,136.736,85.805)
OP1: (8.328,119.087,87.945)
OP2: (7.368,120.865,89.534)
C3': (9.211,123.376,85.551)
C1': (7.264,124.628,85.174)
C5': (7.957,121.149,85.758)
O4': (6.928,123.247,85.116)
C8: (6.568,124.413,87.608)
O2': (9.076,124.800,83.596)
C6: (5.786,127.654,88.701)
C5: (6.137,126.431,88.121)
C4: (6.549,126.453,86.803)
P: (7.432,120.245,88.186)
C4': (8.137,122.449,85.011)
C2': (8.779,124.714,84.981)
C2: (6.290,128.634,86.675)
N1: (5.874,128.763,87.934)
N3: (6.652,127.535,86.016)
N6: (5.370,127.779,89.968)
N7: (6.157,125.139,88.621)
N9: (6.817,125.144,86.470)
O5': (7.788,121.411,87.160)
O3': (10.505,122.994,85.120)
OP2: (7.368,120.865,89.534)
C3': (9.211,123.376,85.551)
C1': (7.264,124.628,85.174)
C5': (7.957,121.149,85.758)
O4': (6.928,123.247,85.116)
C8: (6.568,124.413,87.608)
O2': (9.076,124.800,83.596)
C6: (5.786,127.654,88.701)
C5: (6.137,126.431,88.121)
C4: (6.549,126.453,86.803)
P: (7.432,120.245,88.186)
C4': (8.137,122.449,85.011)
C2': (8.779,124.714,84.981)
C2: (6.290,128.634,86.675)
N1: (5.874,128.763,87.934)
N3: (6.652,127.535,86.016)
N6: (5.370,127.779,89.968)
N7: (6.157,125.139,88.621)
N9: (6.817,125.144,86.470)
O5': (7.788,121.411,87.160)
O3': (10.505,122.994,85.120)
Image (generated by PyMOL):