ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUS:A25:A17

Extra

PDB:
ATOM 1 O3' U A 24 -12.048 -6.962 -12.309 1.00 72.94 O
ATOM 2 P U A 25 -11.278 -8.371 -12.158 1.00 69.13 P
ATOM 3 OP1 U A 25 -12.250 -9.386 -11.704 1.00 69.44 O
ATOM 4 OP2 U A 25 -10.022 -8.221 -11.397 1.00 70.42 O
ATOM 5 O5' U A 25 -10.944 -8.655 -13.686 1.00 65.58 O
ATOM 6 C5' U A 25 -11.981 -9.020 -14.570 1.00 60.34 C
ATOM 7 C4' U A 25 -11.429 -9.824 -15.736 1.00 56.93 C
ATOM 8 O4' U A 25 -10.186 -9.252 -16.207 1.00 54.12 O
ATOM 9 C3' U A 25 -11.025 -11.251 -15.418 1.00 55.03 C
ATOM 10 O3' U A 25 -12.133 -12.117 -15.392 1.00 54.32 O
ATOM 11 C2' U A 25 -10.196 -11.558 -16.640 1.00 54.05 C
ATOM 12 O2' U A 25 -11.040 -11.746 -17.760 1.00 55.62 O
ATOM 13 C1' U A 25 -9.391 -10.282 -16.755 1.00 51.39 C
ATOM 14 N1 U A 25 -8.064 -10.269 -16.053 1.00 50.43 N
ATOM 15 C2 U A 25 -6.962 -10.869 -16.652 1.00 48.59 C
ATOM 16 O2 U A 25 -6.975 -11.454 -17.726 1.00 47.64 O
ATOM 17 N3 U A 25 -5.807 -10.762 -15.919 1.00 49.21 N
ATOM 18 C4 U A 25 -5.619 -10.140 -14.697 1.00 49.41 C
ATOM 19 O4 U A 25 -4.502 -10.144 -14.194 1.00 49.00 O
ATOM 20 C5 U A 25 -6.801 -9.528 -14.140 1.00 49.19 C
ATOM 21 C6 U A 25 -7.952 -9.612 -14.825 1.00 50.08 C
ATOM 22 P C A 26 -12.094 -13.361 -14.397 1.00 53.57 P
ATOM 23 OP1 C A 26 -13.467 -13.907 -14.283 1.00 54.46 O
ATOM 24 OP2 C A 26 -11.358 -12.965 -13.162 1.00 52.17 O
ATOM 25 O5' C A 26 -11.215 -14.374 -15.255 1.00 52.45 O
TER

ATOM 1 O3' G B 16 4.070 -17.683 -16.854 1.00 49.99 O
ATOM 2 P A B 17 4.107 -16.340 -17.727 1.00 49.20 P
ATOM 3 OP1 A B 17 5.061 -16.518 -18.850 1.00 49.31 O
ATOM 4 OP2 A B 17 4.201 -15.227 -16.758 1.00 48.33 O
ATOM 5 O5' A B 17 2.672 -16.305 -18.402 1.00 48.72 O
ATOM 6 C5' A B 17 2.289 -17.388 -19.237 1.00 50.30 C
ATOM 7 C4' A B 17 0.853 -17.207 -19.658 1.00 50.35 C
ATOM 8 O4' A B 17 0.005 -17.088 -18.484 1.00 50.02 O
ATOM 9 C3' A B 17 0.637 -15.914 -20.425 1.00 50.42 C
ATOM 10 O3' A B 17 1.047 -16.122 -21.764 1.00 52.68 O
ATOM 11 C2' A B 17 -0.862 -15.745 -20.259 1.00 49.63 C
ATOM 12 O2' A B 17 -1.605 -16.688 -21.004 1.00 50.87 O
ATOM 13 C1' A B 17 -0.998 -16.112 -18.784 1.00 48.82 C
ATOM 14 N9 A B 17 -0.995 -14.997 -17.831 1.00 47.35 N
ATOM 15 C8 A B 17 -0.019 -14.617 -16.947 1.00 47.11 C
ATOM 16 N7 A B 17 -0.341 -13.573 -16.219 1.00 46.76 N
ATOM 17 C5 A B 17 -1.616 -13.254 -16.661 1.00 46.71 C
ATOM 18 C6 A B 17 -2.540 -12.262 -16.301 1.00 46.53 C
ATOM 19 N6 A B 17 -2.325 -11.337 -15.367 1.00 47.51 N
ATOM 20 N1 A B 17 -3.715 -12.242 -16.936 1.00 46.40 N
ATOM 21 C2 A B 17 -3.982 -13.131 -17.884 1.00 46.83 C
ATOM 22 N3 A B 17 -3.211 -14.118 -18.308 1.00 48.11 N
ATOM 23 C4 A B 17 -2.034 -14.125 -17.647 1.00 47.71 C
ATOM 24 P U B 18 1.497 -14.896 -22.679 1.00 54.24 P
ATOM 25 OP1 U B 18 1.652 -15.428 -24.052 1.00 55.14 O
ATOM 26 OP2 U B 18 2.619 -14.203 -22.006 1.00 55.60 O
ATOM 27 O5' U B 18 0.215 -13.938 -22.654 1.00 54.03 O
TER

Atoms:
C4: (-5.619,-10.140,-14.697)
N3: (-5.807,-10.762,-15.919)
OP1: (-12.250,-9.386,-11.704)
OP2: (-10.022,-8.221,-11.397)
C2: (-6.962,-10.869,-16.652)
C1': (-9.391,-10.282,-16.755)
C3': (-11.025,-11.251,-15.418)
O5': (-10.944,-8.655,-13.686)
O4': (-10.186,-9.252,-16.207)
C5': (-11.981,-9.020,-14.570)
P: (-11.278,-8.371,-12.158)
C4': (-11.429,-9.824,-15.736)
C2': (-10.196,-11.558,-16.640)
O2': (-11.040,-11.746,-17.760)
N1: (-8.064,-10.269,-16.053)
O4: (-4.502,-10.144,-14.194)
O2: (-6.975,-11.454,-17.726)
C6: (-7.952,-9.612,-14.825)
C5: (-6.801,-9.528,-14.140)
O3': (-12.133,-12.117,-15.392)
OP1: (5.061,-16.518,-18.850)
OP2: (4.201,-15.227,-16.758)
C3': (0.637,-15.914,-20.425)
C1': (-0.998,-16.112,-18.784)
C5': (2.289,-17.388,-19.237)
O4': (0.005,-17.088,-18.484)
C8: (-0.019,-14.617,-16.947)
O2': (-1.605,-16.688,-21.004)
C6: (-2.540,-12.262,-16.301)
C5: (-1.616,-13.254,-16.661)
C4: (-2.034,-14.125,-17.647)
P: (4.107,-16.340,-17.727)
C4': (0.853,-17.207,-19.658)
C2': (-0.862,-15.745,-20.259)
C2: (-3.982,-13.131,-17.884)
N1: (-3.715,-12.242,-16.936)
N3: (-3.211,-14.118,-18.308)
N6: (-2.325,-11.337,-15.367)
N7: (-0.341,-13.573,-16.219)
N9: (-0.995,-14.997,-17.831)
O5': (2.672,-16.305,-18.402)
O3': (1.047,-16.122,-21.764)
Image (generated by PyMOL):
PyMOL image
show in jmol