Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2597:A2581
Extra
PDB:
ATOM 1 O3' U A2596 -40.205 113.710 139.543 1.00 12.84 O
ATOM 2 P U A2597 -38.772 113.327 140.152 1.00 1.07 P
ATOM 3 OP1 U A2597 -38.762 111.854 140.357 1.00 1.07 O
ATOM 4 OP2 U A2597 -38.521 114.221 141.327 1.00 1.07 O
ATOM 5 O5' U A2597 -37.791 113.706 138.972 1.00 1.07 O
ATOM 6 C5' U A2597 -36.582 113.018 138.811 1.00 1.07 C
ATOM 7 C4' U A2597 -35.497 113.931 138.350 1.00 1.07 C
ATOM 8 O4' U A2597 -36.006 115.264 138.106 1.00 1.07 O
ATOM 9 C3' U A2597 -34.401 114.186 139.325 1.00 1.07 C
ATOM 10 O3' U A2597 -33.576 113.089 139.498 1.00 1.07 O
ATOM 11 C2' U A2597 -33.718 115.376 138.701 1.00 1.07 C
ATOM 12 O2' U A2597 -32.980 114.974 137.552 1.00 1.07 O
ATOM 13 C1' U A2597 -34.943 116.191 138.267 1.00 1.07 C
ATOM 14 N1 U A2597 -35.332 117.184 139.302 1.00 1.06 N
ATOM 15 C2 U A2597 -34.468 118.253 139.566 1.00 1.06 C
ATOM 16 O2 U A2597 -33.406 118.471 138.977 1.00 1.06 O
ATOM 17 N3 U A2597 -34.917 119.087 140.564 1.00 1.06 N
ATOM 18 C4 U A2597 -36.080 118.974 141.289 1.00 1.06 C
ATOM 19 O4 U A2597 -36.324 119.814 142.145 1.00 1.06 O
ATOM 20 C5 U A2597 -36.896 117.851 140.960 1.00 1.06 C
ATOM 21 C6 U A2597 -36.501 117.013 140.003 1.00 1.06 C
ATOM 22 P C A2598 -33.525 112.404 140.925 1.00 1.91 P
ATOM 23 OP1 C A2598 -33.558 110.929 140.689 1.00 1.91 O
ATOM 24 OP2 C A2598 -34.596 113.033 141.748 1.00 1.91 O
ATOM 25 O5' C A2598 -32.094 112.832 141.457 1.00 1.91 O
TER
ATOM 1 O3' G B2580 -26.991 128.044 142.177 1.00 0.01 O
ATOM 2 P A B2581 -27.945 128.444 140.957 1.00 1.77 P
ATOM 3 OP1 A B2581 -27.254 129.503 140.202 1.00 1.77 O
ATOM 4 OP2 A B2581 -29.281 128.722 141.520 1.00 1.77 O
ATOM 5 O5' A B2581 -27.997 127.109 140.098 1.00 1.77 O
ATOM 6 C5' A B2581 -26.805 126.462 139.731 1.00 1.77 C
ATOM 7 C4' A B2581 -27.083 125.156 139.076 1.00 1.77 C
ATOM 8 O4' A B2581 -27.455 124.182 140.067 1.00 1.77 O
ATOM 9 C3' A B2581 -28.236 125.140 138.105 1.00 1.77 C
ATOM 10 O3' A B2581 -27.902 125.680 136.847 1.00 1.77 O
ATOM 11 C2' A B2581 -28.563 123.674 138.055 1.00 1.77 C
ATOM 12 O2' A B2581 -27.584 122.980 137.296 1.00 1.77 O
ATOM 13 C1' A B2581 -28.410 123.307 139.529 1.00 1.77 C
ATOM 14 N9 A B2581 -29.668 123.514 140.260 1.00 1.94 N
ATOM 15 C8 A B2581 -30.000 124.691 140.864 1.00 1.94 C
ATOM 16 N7 A B2581 -31.172 124.685 141.443 1.00 1.94 N
ATOM 17 C5 A B2581 -31.654 123.421 141.188 1.00 1.94 C
ATOM 18 C6 A B2581 -32.871 122.828 141.541 1.00 1.94 C
ATOM 19 N6 A B2581 -33.820 123.478 142.244 1.00 1.94 N
ATOM 20 N1 A B2581 -33.067 121.548 141.145 1.00 1.94 N
ATOM 21 C2 A B2581 -32.095 120.940 140.454 1.00 1.94 C
ATOM 22 N3 A B2581 -30.907 121.411 140.059 1.00 1.94 N
ATOM 23 C4 A B2581 -30.744 122.680 140.460 1.00 1.94 C
ATOM 24 P A B2582 -29.044 126.289 135.908 1.00 0.01 P
ATOM 25 OP1 A B2582 -28.357 127.078 134.853 1.00 0.01 O
ATOM 26 OP2 A B2582 -30.025 126.969 136.785 1.00 0.01 O
ATOM 27 O5' A B2582 -29.702 124.987 135.287 1.00 0.01 O
TER
ATOM 2 P U A2597 -38.772 113.327 140.152 1.00 1.07 P
ATOM 3 OP1 U A2597 -38.762 111.854 140.357 1.00 1.07 O
ATOM 4 OP2 U A2597 -38.521 114.221 141.327 1.00 1.07 O
ATOM 5 O5' U A2597 -37.791 113.706 138.972 1.00 1.07 O
ATOM 6 C5' U A2597 -36.582 113.018 138.811 1.00 1.07 C
ATOM 7 C4' U A2597 -35.497 113.931 138.350 1.00 1.07 C
ATOM 8 O4' U A2597 -36.006 115.264 138.106 1.00 1.07 O
ATOM 9 C3' U A2597 -34.401 114.186 139.325 1.00 1.07 C
ATOM 10 O3' U A2597 -33.576 113.089 139.498 1.00 1.07 O
ATOM 11 C2' U A2597 -33.718 115.376 138.701 1.00 1.07 C
ATOM 12 O2' U A2597 -32.980 114.974 137.552 1.00 1.07 O
ATOM 13 C1' U A2597 -34.943 116.191 138.267 1.00 1.07 C
ATOM 14 N1 U A2597 -35.332 117.184 139.302 1.00 1.06 N
ATOM 15 C2 U A2597 -34.468 118.253 139.566 1.00 1.06 C
ATOM 16 O2 U A2597 -33.406 118.471 138.977 1.00 1.06 O
ATOM 17 N3 U A2597 -34.917 119.087 140.564 1.00 1.06 N
ATOM 18 C4 U A2597 -36.080 118.974 141.289 1.00 1.06 C
ATOM 19 O4 U A2597 -36.324 119.814 142.145 1.00 1.06 O
ATOM 20 C5 U A2597 -36.896 117.851 140.960 1.00 1.06 C
ATOM 21 C6 U A2597 -36.501 117.013 140.003 1.00 1.06 C
ATOM 22 P C A2598 -33.525 112.404 140.925 1.00 1.91 P
ATOM 23 OP1 C A2598 -33.558 110.929 140.689 1.00 1.91 O
ATOM 24 OP2 C A2598 -34.596 113.033 141.748 1.00 1.91 O
ATOM 25 O5' C A2598 -32.094 112.832 141.457 1.00 1.91 O
TER
ATOM 1 O3' G B2580 -26.991 128.044 142.177 1.00 0.01 O
ATOM 2 P A B2581 -27.945 128.444 140.957 1.00 1.77 P
ATOM 3 OP1 A B2581 -27.254 129.503 140.202 1.00 1.77 O
ATOM 4 OP2 A B2581 -29.281 128.722 141.520 1.00 1.77 O
ATOM 5 O5' A B2581 -27.997 127.109 140.098 1.00 1.77 O
ATOM 6 C5' A B2581 -26.805 126.462 139.731 1.00 1.77 C
ATOM 7 C4' A B2581 -27.083 125.156 139.076 1.00 1.77 C
ATOM 8 O4' A B2581 -27.455 124.182 140.067 1.00 1.77 O
ATOM 9 C3' A B2581 -28.236 125.140 138.105 1.00 1.77 C
ATOM 10 O3' A B2581 -27.902 125.680 136.847 1.00 1.77 O
ATOM 11 C2' A B2581 -28.563 123.674 138.055 1.00 1.77 C
ATOM 12 O2' A B2581 -27.584 122.980 137.296 1.00 1.77 O
ATOM 13 C1' A B2581 -28.410 123.307 139.529 1.00 1.77 C
ATOM 14 N9 A B2581 -29.668 123.514 140.260 1.00 1.94 N
ATOM 15 C8 A B2581 -30.000 124.691 140.864 1.00 1.94 C
ATOM 16 N7 A B2581 -31.172 124.685 141.443 1.00 1.94 N
ATOM 17 C5 A B2581 -31.654 123.421 141.188 1.00 1.94 C
ATOM 18 C6 A B2581 -32.871 122.828 141.541 1.00 1.94 C
ATOM 19 N6 A B2581 -33.820 123.478 142.244 1.00 1.94 N
ATOM 20 N1 A B2581 -33.067 121.548 141.145 1.00 1.94 N
ATOM 21 C2 A B2581 -32.095 120.940 140.454 1.00 1.94 C
ATOM 22 N3 A B2581 -30.907 121.411 140.059 1.00 1.94 N
ATOM 23 C4 A B2581 -30.744 122.680 140.460 1.00 1.94 C
ATOM 24 P A B2582 -29.044 126.289 135.908 1.00 0.01 P
ATOM 25 OP1 A B2582 -28.357 127.078 134.853 1.00 0.01 O
ATOM 26 OP2 A B2582 -30.025 126.969 136.785 1.00 0.01 O
ATOM 27 O5' A B2582 -29.702 124.987 135.287 1.00 0.01 O
TER
Atoms:
C4: (-36.080,118.974,141.289)
N3: (-34.917,119.087,140.564)
OP1: (-38.762,111.854,140.357)
OP2: (-38.521,114.221,141.327)
C2: (-34.468,118.253,139.566)
C1': (-34.943,116.191,138.267)
C3': (-34.401,114.186,139.325)
O5': (-37.791,113.706,138.972)
O4': (-36.006,115.264,138.106)
C5': (-36.582,113.018,138.811)
P: (-38.772,113.327,140.152)
C4': (-35.497,113.931,138.350)
C2': (-33.718,115.376,138.701)
O2': (-32.980,114.974,137.552)
N1: (-35.332,117.184,139.302)
O4: (-36.324,119.814,142.145)
O2: (-33.406,118.471,138.977)
C6: (-36.501,117.013,140.003)
C5: (-36.896,117.851,140.960)
O3': (-33.576,113.089,139.498)
N3: (-34.917,119.087,140.564)
OP1: (-38.762,111.854,140.357)
OP2: (-38.521,114.221,141.327)
C2: (-34.468,118.253,139.566)
C1': (-34.943,116.191,138.267)
C3': (-34.401,114.186,139.325)
O5': (-37.791,113.706,138.972)
O4': (-36.006,115.264,138.106)
C5': (-36.582,113.018,138.811)
P: (-38.772,113.327,140.152)
C4': (-35.497,113.931,138.350)
C2': (-33.718,115.376,138.701)
O2': (-32.980,114.974,137.552)
N1: (-35.332,117.184,139.302)
O4: (-36.324,119.814,142.145)
O2: (-33.406,118.471,138.977)
C6: (-36.501,117.013,140.003)
C5: (-36.896,117.851,140.960)
O3': (-33.576,113.089,139.498)
OP1: (-27.254,129.503,140.202)
OP2: (-29.281,128.722,141.520)
C3': (-28.236,125.140,138.105)
C1': (-28.410,123.307,139.529)
C5': (-26.805,126.462,139.731)
O4': (-27.455,124.182,140.067)
C8: (-30.000,124.691,140.864)
O2': (-27.584,122.980,137.296)
C6: (-32.871,122.828,141.541)
C5: (-31.654,123.421,141.188)
C4: (-30.744,122.680,140.460)
P: (-27.945,128.444,140.957)
C4': (-27.083,125.156,139.076)
C2': (-28.563,123.674,138.055)
C2: (-32.095,120.940,140.454)
N1: (-33.067,121.548,141.145)
N3: (-30.907,121.411,140.059)
N6: (-33.820,123.478,142.244)
N7: (-31.172,124.685,141.443)
N9: (-29.668,123.514,140.260)
O5': (-27.997,127.109,140.098)
O3': (-27.902,125.680,136.847)
OP2: (-29.281,128.722,141.520)
C3': (-28.236,125.140,138.105)
C1': (-28.410,123.307,139.529)
C5': (-26.805,126.462,139.731)
O4': (-27.455,124.182,140.067)
C8: (-30.000,124.691,140.864)
O2': (-27.584,122.980,137.296)
C6: (-32.871,122.828,141.541)
C5: (-31.654,123.421,141.188)
C4: (-30.744,122.680,140.460)
P: (-27.945,128.444,140.957)
C4': (-27.083,125.156,139.076)
C2': (-28.563,123.674,138.055)
C2: (-32.095,120.940,140.454)
N1: (-33.067,121.548,141.145)
N3: (-30.907,121.411,140.059)
N6: (-33.820,123.478,142.244)
N7: (-31.172,124.685,141.443)
N9: (-29.668,123.514,140.260)
O5': (-27.997,127.109,140.098)
O3': (-27.902,125.680,136.847)
Image (generated by PyMOL):