Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2098:A2177
Extra
PDB:
ATOM 1 O3' C A2097 -103.702 2.973 72.344 1.00 99.49 O
ATOM 2 P U A2098 -104.860 3.988 71.878 1.00101.37 P
ATOM 3 OP1 U A2098 -106.130 3.212 71.819 1.00101.37 O
ATOM 4 OP2 U A2098 -104.381 4.672 70.647 1.00101.37 O
ATOM 5 O5' U A2098 -104.915 5.021 73.082 1.00101.37 O
ATOM 6 C5' U A2098 -105.301 6.360 72.863 1.00101.37 C
ATOM 7 C4' U A2098 -104.405 7.320 73.598 1.00101.37 C
ATOM 8 O4' U A2098 -103.005 6.995 73.358 1.00101.37 O
ATOM 9 C3' U A2098 -104.519 8.766 73.167 1.00101.37 C
ATOM 10 O3' U A2098 -105.658 9.409 73.700 1.00101.37 O
ATOM 11 C2' U A2098 -103.183 9.351 73.608 1.00101.37 C
ATOM 12 O2' U A2098 -103.154 9.575 75.013 1.00101.37 O
ATOM 13 C1' U A2098 -102.244 8.190 73.267 1.00101.37 C
ATOM 14 N1 U A2098 -101.707 8.299 71.881 1.00 99.76 N
ATOM 15 C2 U A2098 -100.800 9.311 71.561 1.00 99.76 C
ATOM 16 O2 U A2098 -100.401 10.141 72.364 1.00 99.76 O
ATOM 17 N3 U A2098 -100.372 9.322 70.250 1.00 99.76 N
ATOM 18 C4 U A2098 -100.754 8.440 69.263 1.00 99.76 C
ATOM 19 O4 U A2098 -100.283 8.573 68.142 1.00 99.76 O
ATOM 20 C5 U A2098 -101.687 7.429 69.656 1.00 99.76 C
ATOM 21 C6 U A2098 -102.119 7.397 70.920 1.00 99.76 C
ATOM 22 P U A2099 -106.908 9.728 72.740 1.00126.69 P
ATOM 23 OP1 U A2099 -108.131 9.705 73.587 1.00126.69 O
ATOM 24 OP2 U A2099 -106.824 8.797 71.581 1.00126.69 O
ATOM 25 O5' U A2099 -106.591 11.218 72.272 1.00126.69 O
TER
ATOM 1 O3' A B2176 -96.096 13.825 59.839 1.00102.49 O
ATOM 2 P A B2177 -95.121 12.701 60.467 1.00 99.67 P
ATOM 3 OP1 A B2177 -93.937 12.602 59.584 1.00 99.67 O
ATOM 4 OP2 A B2177 -95.944 11.479 60.692 1.00 99.67 O
ATOM 5 O5' A B2177 -94.709 13.351 61.868 1.00 99.67 O
ATOM 6 C5' A B2177 -94.767 14.761 62.059 1.00 99.67 C
ATOM 7 C4' A B2177 -95.184 15.117 63.463 1.00 99.67 C
ATOM 8 O4' A B2177 -96.597 14.861 63.649 1.00 99.67 O
ATOM 9 C3' A B2177 -94.515 14.323 64.562 1.00 99.67 C
ATOM 10 O3' A B2177 -93.230 14.816 64.870 1.00 99.67 O
ATOM 11 C2' A B2177 -95.507 14.423 65.717 1.00 99.67 C
ATOM 12 O2' A B2177 -95.347 15.639 66.428 1.00 99.67 O
ATOM 13 C1' A B2177 -96.845 14.460 64.983 1.00 99.67 C
ATOM 14 N9 A B2177 -97.513 13.143 64.971 1.00 98.97 N
ATOM 15 C8 A B2177 -97.600 12.271 63.909 1.00 98.97 C
ATOM 16 N7 A B2177 -98.264 11.174 64.164 1.00 98.97 N
ATOM 17 C5 A B2177 -98.646 11.327 65.487 1.00 98.97 C
ATOM 18 C6 A B2177 -99.381 10.479 66.328 1.00 98.97 C
ATOM 19 N6 A B2177 -99.841 9.304 65.889 1.00 98.97 N
ATOM 20 N1 A B2177 -99.609 10.887 67.604 1.00 98.97 N
ATOM 21 C2 A B2177 -99.118 12.088 67.970 1.00 98.97 C
ATOM 22 N3 A B2177 -98.409 12.976 67.262 1.00 98.97 N
ATOM 23 C4 A B2177 -98.201 12.533 66.005 1.00 98.97 C
ATOM 24 P U B2178 -92.114 13.835 65.463 1.00 86.40 P
ATOM 25 OP1 U B2178 -90.801 14.302 64.932 1.00 86.40 O
ATOM 26 OP2 U B2178 -92.561 12.445 65.173 1.00 86.40 O
ATOM 27 O5' U B2178 -92.197 14.112 67.026 1.00 86.40 O
TER
ATOM 2 P U A2098 -104.860 3.988 71.878 1.00101.37 P
ATOM 3 OP1 U A2098 -106.130 3.212 71.819 1.00101.37 O
ATOM 4 OP2 U A2098 -104.381 4.672 70.647 1.00101.37 O
ATOM 5 O5' U A2098 -104.915 5.021 73.082 1.00101.37 O
ATOM 6 C5' U A2098 -105.301 6.360 72.863 1.00101.37 C
ATOM 7 C4' U A2098 -104.405 7.320 73.598 1.00101.37 C
ATOM 8 O4' U A2098 -103.005 6.995 73.358 1.00101.37 O
ATOM 9 C3' U A2098 -104.519 8.766 73.167 1.00101.37 C
ATOM 10 O3' U A2098 -105.658 9.409 73.700 1.00101.37 O
ATOM 11 C2' U A2098 -103.183 9.351 73.608 1.00101.37 C
ATOM 12 O2' U A2098 -103.154 9.575 75.013 1.00101.37 O
ATOM 13 C1' U A2098 -102.244 8.190 73.267 1.00101.37 C
ATOM 14 N1 U A2098 -101.707 8.299 71.881 1.00 99.76 N
ATOM 15 C2 U A2098 -100.800 9.311 71.561 1.00 99.76 C
ATOM 16 O2 U A2098 -100.401 10.141 72.364 1.00 99.76 O
ATOM 17 N3 U A2098 -100.372 9.322 70.250 1.00 99.76 N
ATOM 18 C4 U A2098 -100.754 8.440 69.263 1.00 99.76 C
ATOM 19 O4 U A2098 -100.283 8.573 68.142 1.00 99.76 O
ATOM 20 C5 U A2098 -101.687 7.429 69.656 1.00 99.76 C
ATOM 21 C6 U A2098 -102.119 7.397 70.920 1.00 99.76 C
ATOM 22 P U A2099 -106.908 9.728 72.740 1.00126.69 P
ATOM 23 OP1 U A2099 -108.131 9.705 73.587 1.00126.69 O
ATOM 24 OP2 U A2099 -106.824 8.797 71.581 1.00126.69 O
ATOM 25 O5' U A2099 -106.591 11.218 72.272 1.00126.69 O
TER
ATOM 1 O3' A B2176 -96.096 13.825 59.839 1.00102.49 O
ATOM 2 P A B2177 -95.121 12.701 60.467 1.00 99.67 P
ATOM 3 OP1 A B2177 -93.937 12.602 59.584 1.00 99.67 O
ATOM 4 OP2 A B2177 -95.944 11.479 60.692 1.00 99.67 O
ATOM 5 O5' A B2177 -94.709 13.351 61.868 1.00 99.67 O
ATOM 6 C5' A B2177 -94.767 14.761 62.059 1.00 99.67 C
ATOM 7 C4' A B2177 -95.184 15.117 63.463 1.00 99.67 C
ATOM 8 O4' A B2177 -96.597 14.861 63.649 1.00 99.67 O
ATOM 9 C3' A B2177 -94.515 14.323 64.562 1.00 99.67 C
ATOM 10 O3' A B2177 -93.230 14.816 64.870 1.00 99.67 O
ATOM 11 C2' A B2177 -95.507 14.423 65.717 1.00 99.67 C
ATOM 12 O2' A B2177 -95.347 15.639 66.428 1.00 99.67 O
ATOM 13 C1' A B2177 -96.845 14.460 64.983 1.00 99.67 C
ATOM 14 N9 A B2177 -97.513 13.143 64.971 1.00 98.97 N
ATOM 15 C8 A B2177 -97.600 12.271 63.909 1.00 98.97 C
ATOM 16 N7 A B2177 -98.264 11.174 64.164 1.00 98.97 N
ATOM 17 C5 A B2177 -98.646 11.327 65.487 1.00 98.97 C
ATOM 18 C6 A B2177 -99.381 10.479 66.328 1.00 98.97 C
ATOM 19 N6 A B2177 -99.841 9.304 65.889 1.00 98.97 N
ATOM 20 N1 A B2177 -99.609 10.887 67.604 1.00 98.97 N
ATOM 21 C2 A B2177 -99.118 12.088 67.970 1.00 98.97 C
ATOM 22 N3 A B2177 -98.409 12.976 67.262 1.00 98.97 N
ATOM 23 C4 A B2177 -98.201 12.533 66.005 1.00 98.97 C
ATOM 24 P U B2178 -92.114 13.835 65.463 1.00 86.40 P
ATOM 25 OP1 U B2178 -90.801 14.302 64.932 1.00 86.40 O
ATOM 26 OP2 U B2178 -92.561 12.445 65.173 1.00 86.40 O
ATOM 27 O5' U B2178 -92.197 14.112 67.026 1.00 86.40 O
TER
Atoms:
C4: (-100.754,8.440,69.263)
N3: (-100.372,9.322,70.250)
OP1: (-106.130,3.212,71.819)
OP2: (-104.381,4.672,70.647)
C2: (-100.800,9.311,71.561)
C1': (-102.244,8.190,73.267)
C3': (-104.519,8.766,73.167)
O5': (-104.915,5.021,73.082)
O4': (-103.005,6.995,73.358)
C5': (-105.301,6.360,72.863)
P: (-104.860,3.988,71.878)
C4': (-104.405,7.320,73.598)
C2': (-103.183,9.351,73.608)
O2': (-103.154,9.575,75.013)
N1: (-101.707,8.299,71.881)
O4: (-100.283,8.573,68.142)
O2: (-100.401,10.141,72.364)
C6: (-102.119,7.397,70.920)
C5: (-101.687,7.429,69.656)
O3': (-105.658,9.409,73.700)
N3: (-100.372,9.322,70.250)
OP1: (-106.130,3.212,71.819)
OP2: (-104.381,4.672,70.647)
C2: (-100.800,9.311,71.561)
C1': (-102.244,8.190,73.267)
C3': (-104.519,8.766,73.167)
O5': (-104.915,5.021,73.082)
O4': (-103.005,6.995,73.358)
C5': (-105.301,6.360,72.863)
P: (-104.860,3.988,71.878)
C4': (-104.405,7.320,73.598)
C2': (-103.183,9.351,73.608)
O2': (-103.154,9.575,75.013)
N1: (-101.707,8.299,71.881)
O4: (-100.283,8.573,68.142)
O2: (-100.401,10.141,72.364)
C6: (-102.119,7.397,70.920)
C5: (-101.687,7.429,69.656)
O3': (-105.658,9.409,73.700)
OP1: (-93.937,12.602,59.584)
OP2: (-95.944,11.479,60.692)
C3': (-94.515,14.323,64.562)
C1': (-96.845,14.460,64.983)
C5': (-94.767,14.761,62.059)
O4': (-96.597,14.861,63.649)
C8: (-97.600,12.271,63.909)
O2': (-95.347,15.639,66.428)
C6: (-99.381,10.479,66.328)
C5: (-98.646,11.327,65.487)
C4: (-98.201,12.533,66.005)
P: (-95.121,12.701,60.467)
C4': (-95.184,15.117,63.463)
C2': (-95.507,14.423,65.717)
C2: (-99.118,12.088,67.970)
N1: (-99.609,10.887,67.604)
N3: (-98.409,12.976,67.262)
N6: (-99.841,9.304,65.889)
N7: (-98.264,11.174,64.164)
N9: (-97.513,13.143,64.971)
O5': (-94.709,13.351,61.868)
O3': (-93.230,14.816,64.870)
OP2: (-95.944,11.479,60.692)
C3': (-94.515,14.323,64.562)
C1': (-96.845,14.460,64.983)
C5': (-94.767,14.761,62.059)
O4': (-96.597,14.861,63.649)
C8: (-97.600,12.271,63.909)
O2': (-95.347,15.639,66.428)
C6: (-99.381,10.479,66.328)
C5: (-98.646,11.327,65.487)
C4: (-98.201,12.533,66.005)
P: (-95.121,12.701,60.467)
C4': (-95.184,15.117,63.463)
C2': (-95.507,14.423,65.717)
C2: (-99.118,12.088,67.970)
N1: (-99.609,10.887,67.604)
N3: (-98.409,12.976,67.262)
N6: (-99.841,9.304,65.889)
N7: (-98.264,11.174,64.164)
N9: (-97.513,13.143,64.971)
O5': (-94.709,13.351,61.868)
O3': (-93.230,14.816,64.870)
Image (generated by PyMOL):