ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01279:01296

Extra

PDB:
ATOM 1 O3' G A1278 22.424 130.415 66.049 1.00 42.01 O
ATOM 2 P U A1279 21.980 129.969 67.534 1.00 42.86 P
ATOM 3 OP1 U A1279 23.179 129.311 68.105 1.00 45.39 O
ATOM 4 OP2 U A1279 20.691 129.226 67.469 1.00 42.15 O
ATOM 5 O5' U A1279 21.754 131.337 68.315 1.00 40.76 O
ATOM 6 C5' U A1279 22.847 132.244 68.505 1.00 40.98 C
ATOM 7 C4' U A1279 22.354 133.569 69.028 1.00 40.56 C
ATOM 8 O4' U A1279 21.518 134.218 68.038 1.00 40.38 O
ATOM 9 C3' U A1279 21.486 133.493 70.267 1.00 41.22 C
ATOM 10 O3' U A1279 22.290 133.366 71.431 1.00 42.74 O
ATOM 11 C2' U A1279 20.714 134.803 70.192 1.00 41.45 C
ATOM 12 O2' U A1279 21.477 135.926 70.570 1.00 40.77 O
ATOM 13 C1' U A1279 20.460 134.909 68.687 1.00 42.28 C
ATOM 14 N1 U A1279 19.172 134.314 68.277 1.00 43.31 N
ATOM 15 C2 U A1279 18.031 135.072 68.464 1.00 42.14 C
ATOM 16 O2 U A1279 18.050 136.188 68.939 1.00 44.83 O
ATOM 17 N3 U A1279 16.862 134.472 68.074 1.00 43.10 N
ATOM 18 C4 U A1279 16.711 133.216 67.524 1.00 44.63 C
ATOM 19 O4 U A1279 15.580 132.819 67.221 1.00 44.16 O
ATOM 20 C5 U A1279 17.933 132.486 67.360 1.00 43.75 C
ATOM 21 C6 U A1279 19.094 133.044 67.732 1.00 43.01 C
ATOM 22 P A A1280 21.735 132.553 72.705 1.00 43.71 P
ATOM 23 OP1 A A1280 22.865 132.508 73.660 1.00 44.59 O
ATOM 24 OP2 A A1280 21.082 131.285 72.279 1.00 42.35 O
ATOM 25 O5' A A1280 20.624 133.517 73.306 1.00 41.21 O
TER

ATOM 1 O3' U B1295 5.511 137.713 70.295 1.00 47.39 O
ATOM 2 P A B1296 5.994 138.579 69.033 1.00 49.29 P
ATOM 3 OP1 A B1296 5.072 139.738 68.940 1.00 49.27 O
ATOM 4 OP2 A B1296 6.167 137.676 67.857 1.00 48.31 O
ATOM 5 O5' A B1296 7.432 139.121 69.459 1.00 50.36 O
ATOM 6 C5' A B1296 7.554 140.146 70.466 1.00 50.31 C
ATOM 7 C4' A B1296 9.000 140.353 70.849 1.00 49.26 C
ATOM 8 O4' A B1296 9.560 139.117 71.369 1.00 48.16 O
ATOM 9 C3' A B1296 9.962 140.706 69.733 1.00 50.19 C
ATOM 10 O3' A B1296 9.879 142.060 69.320 1.00 51.29 O
ATOM 11 C2' A B1296 11.295 140.381 70.383 1.00 49.40 C
ATOM 12 O2' A B1296 11.656 141.339 71.358 1.00 51.92 O
ATOM 13 C1' A B1296 10.953 139.068 71.084 1.00 48.69 C
ATOM 14 N9 A B1296 11.223 137.922 70.208 1.00 47.40 N
ATOM 15 C8 A B1296 10.332 137.170 69.470 1.00 43.89 C
ATOM 16 N7 A B1296 10.899 136.217 68.770 1.00 43.11 N
ATOM 17 C5 A B1296 12.253 136.345 69.065 1.00 44.51 C
ATOM 18 C6 A B1296 13.386 135.632 68.635 1.00 43.11 C
ATOM 19 N6 A B1296 13.331 134.611 67.785 1.00 41.95 N
ATOM 20 N1 A B1296 14.595 136.012 69.118 1.00 45.28 N
ATOM 21 C2 A B1296 14.651 137.041 69.972 1.00 43.25 C
ATOM 22 N3 A B1296 13.654 137.795 70.448 1.00 47.12 N
ATOM 23 C4 A B1296 12.466 137.388 69.950 1.00 45.41 C
ATOM 24 P U B1297 10.166 142.427 67.782 1.00 53.44 P
ATOM 25 OP1 U B1297 9.844 143.869 67.589 1.00 52.43 O
ATOM 26 OP2 U B1297 9.504 141.399 66.937 1.00 50.43 O
ATOM 27 O5' U B1297 11.736 142.214 67.607 1.00 51.92 O
TER

Atoms:
C4: (16.711,133.216,67.524)
N3: (16.862,134.472,68.074)
OP1: (23.179,129.311,68.105)
OP2: (20.691,129.226,67.469)
C2: (18.031,135.072,68.464)
C1': (20.460,134.909,68.687)
C3': (21.486,133.493,70.267)
O5': (21.754,131.337,68.315)
O4': (21.518,134.218,68.038)
C5': (22.847,132.244,68.505)
P: (21.980,129.969,67.534)
C4': (22.354,133.569,69.028)
C2': (20.714,134.803,70.192)
O2': (21.477,135.926,70.570)
N1: (19.172,134.314,68.277)
O4: (15.580,132.819,67.221)
O2: (18.050,136.188,68.939)
C6: (19.094,133.044,67.732)
C5: (17.933,132.486,67.360)
O3': (22.290,133.366,71.431)
OP1: (5.072,139.738,68.940)
OP2: (6.167,137.676,67.857)
C3': (9.962,140.706,69.733)
C1': (10.953,139.068,71.084)
C5': (7.554,140.146,70.466)
O4': (9.560,139.117,71.369)
C8: (10.332,137.170,69.470)
O2': (11.656,141.339,71.358)
C6: (13.386,135.632,68.635)
C5: (12.253,136.345,69.065)
C4: (12.466,137.388,69.950)
P: (5.994,138.579,69.033)
C4': (9.000,140.353,70.849)
C2': (11.295,140.381,70.383)
C2: (14.651,137.041,69.972)
N1: (14.595,136.012,69.118)
N3: (13.654,137.795,70.448)
N6: (13.331,134.611,67.785)
N7: (10.899,136.217,68.770)
N9: (11.223,137.922,70.208)
O5': (7.432,139.121,69.459)
O3': (9.879,142.060,69.320)
Image (generated by PyMOL):
PyMOL image
show in jmol