ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FFK:0252:0235

Extra

PDB:
ATOM 1 O3' G A 251 91.312 119.205 3.215 1.00 27.65 O
ATOM 2 P U A 252 90.035 119.247 4.174 1.00 28.50 P
ATOM 3 OP1 U A 252 90.476 119.872 5.443 1.00 27.21 O
ATOM 4 OP2 U A 252 89.412 117.906 4.192 1.00 28.37 O
ATOM 5 O5' U A 252 89.033 120.232 3.438 1.00 28.93 O
ATOM 6 C5' U A 252 88.931 121.605 3.830 1.00 29.84 C
ATOM 7 C4' U A 252 88.451 122.427 2.669 1.00 30.39 C
ATOM 8 O4' U A 252 89.527 122.618 1.715 1.00 30.17 O
ATOM 9 C3' U A 252 87.343 121.760 1.878 1.00 30.65 C
ATOM 10 O3' U A 252 86.077 121.989 2.473 1.00 30.67 O
ATOM 11 C2' U A 252 87.496 122.388 0.501 1.00 29.78 C
ATOM 12 O2' U A 252 86.884 123.658 0.435 1.00 29.91 O
ATOM 13 C1' U A 252 89.016 122.541 0.397 1.00 29.86 C
ATOM 14 N1 U A 252 89.650 121.390 -0.265 1.00 31.40 N
ATOM 15 C2 U A 252 89.518 121.267 -1.645 1.00 32.83 C
ATOM 16 O2 U A 252 88.953 122.104 -2.343 1.00 35.91 O
ATOM 17 N3 U A 252 90.082 120.135 -2.178 1.00 30.40 N
ATOM 18 C4 U A 252 90.764 119.150 -1.499 1.00 30.41 C
ATOM 19 O4 U A 252 91.186 118.173 -2.116 1.00 30.83 O
ATOM 20 C5 U A 252 90.889 119.367 -0.091 1.00 30.36 C
ATOM 21 C6 U A 252 90.343 120.447 0.463 1.00 30.22 C
ATOM 22 P G A 253 84.972 120.832 2.435 1.00 30.63 P
ATOM 23 OP1 G A 253 83.689 121.459 2.831 1.00 29.66 O
ATOM 24 OP2 G A 253 85.473 119.650 3.177 1.00 31.67 O
ATOM 25 O5' G A 253 84.904 120.424 0.900 1.00 31.11 O
TER

ATOM 1 O3' A B 234 91.546 123.854 -8.296 1.00 36.82 O
ATOM 2 P A B 235 91.124 124.619 -9.642 1.00 38.04 P
ATOM 3 OP1 A B 235 92.178 124.417 -10.676 1.00 37.41 O
ATOM 4 OP2 A B 235 90.732 126.000 -9.253 1.00 37.18 O
ATOM 5 O5' A B 235 89.815 123.850 -10.116 1.00 37.26 O
ATOM 6 C5' A B 235 88.667 123.751 -9.260 1.00 37.32 C
ATOM 7 C4' A B 235 87.732 122.688 -9.775 1.00 36.59 C
ATOM 8 O4' A B 235 88.472 121.461 -9.961 1.00 36.43 O
ATOM 9 C3' A B 235 86.595 122.332 -8.837 1.00 36.76 C
ATOM 10 O3' A B 235 85.475 123.175 -9.080 1.00 36.94 O
ATOM 11 C2' A B 235 86.279 120.884 -9.200 1.00 36.76 C
ATOM 12 O2' A B 235 85.343 120.793 -10.252 1.00 37.23 O
ATOM 13 C1' A B 235 87.640 120.359 -9.673 1.00 36.56 C
ATOM 14 N9 A B 235 88.358 119.479 -8.754 1.00 36.34 N
ATOM 15 C8 A B 235 88.823 118.214 -9.015 1.00 36.05 C
ATOM 16 N7 A B 235 89.463 117.668 -8.011 1.00 36.69 N
ATOM 17 C5 A B 235 89.408 118.636 -7.017 1.00 36.85 C
ATOM 18 C6 A B 235 89.906 118.673 -5.705 1.00 37.17 C
ATOM 19 N6 A B 235 90.583 117.670 -5.135 1.00 37.13 N
ATOM 20 N1 A B 235 89.684 119.791 -4.985 1.00 37.71 N
ATOM 21 C2 A B 235 89.004 120.795 -5.550 1.00 37.42 C
ATOM 22 N3 A B 235 88.484 120.878 -6.767 1.00 37.37 N
ATOM 23 C4 A B 235 88.725 119.753 -7.460 1.00 36.73 C
ATOM 24 P G B 236 85.268 124.496 -8.193 1.00 39.03 P
ATOM 25 OP1 G B 236 83.845 124.905 -8.270 1.00 38.73 O
ATOM 26 OP2 G B 236 86.331 125.471 -8.549 1.00 39.27 O
ATOM 27 O5' G B 236 85.548 124.009 -6.700 1.00 40.24 O
TER

Atoms:
C4: (90.764,119.150,-1.499)
N3: (90.082,120.135,-2.178)
OP1: (90.476,119.872,5.443)
OP2: (89.412,117.906,4.192)
C2: (89.518,121.267,-1.645)
C1': (89.016,122.541,0.397)
C3': (87.343,121.760,1.878)
O5': (89.033,120.232,3.438)
O4': (89.527,122.618,1.715)
C5': (88.931,121.605,3.830)
P: (90.035,119.247,4.174)
C4': (88.451,122.427,2.669)
C2': (87.496,122.388,0.501)
O2': (86.884,123.658,0.435)
N1: (89.650,121.390,-0.265)
O4: (91.186,118.173,-2.116)
O2: (88.953,122.104,-2.343)
C6: (90.343,120.447,0.463)
C5: (90.889,119.367,-0.091)
O3': (86.077,121.989,2.473)
OP1: (92.178,124.417,-10.676)
OP2: (90.732,126.000,-9.253)
C3': (86.595,122.332,-8.837)
C1': (87.640,120.359,-9.673)
C5': (88.667,123.751,-9.260)
O4': (88.472,121.461,-9.961)
C8: (88.823,118.214,-9.015)
O2': (85.343,120.793,-10.252)
C6: (89.906,118.673,-5.705)
C5: (89.408,118.636,-7.017)
C4: (88.725,119.753,-7.460)
P: (91.124,124.619,-9.642)
C4': (87.732,122.688,-9.775)
C2': (86.279,120.884,-9.200)
C2: (89.004,120.795,-5.550)
N1: (89.684,119.791,-4.985)
N3: (88.484,120.878,-6.767)
N6: (90.583,117.670,-5.135)
N7: (89.463,117.668,-8.011)
N9: (88.358,119.479,-8.754)
O5': (89.815,123.850,-10.116)
O3': (85.475,123.175,-9.080)
Image (generated by PyMOL):
PyMOL image
show in jmol