Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
377D:B2:A3
Extra
PDB:
ATOM 1 O3' G A 1 5.969 4.763 39.133 1.00 20.78 O
ATOM 2 P U A 2 6.509 6.074 38.377 1.00 21.45 P
ATOM 3 OP1 U A 2 7.760 6.449 39.080 1.00 26.49 O
ATOM 4 OP2 U A 2 5.423 7.075 38.231 1.00 22.06 O
ATOM 5 O5' U A 2 6.895 5.572 36.922 1.00 17.81 O
ATOM 6 C5' U A 2 7.990 4.680 36.722 1.00 15.84 C
ATOM 7 C4' U A 2 7.956 4.142 35.324 1.00 16.98 C
ATOM 8 O4' U A 2 6.772 3.325 35.157 1.00 19.42 O
ATOM 9 C3' U A 2 7.820 5.171 34.221 1.00 18.98 C
ATOM 10 O3' U A 2 9.065 5.774 33.901 1.00 18.40 O
ATOM 11 C2' U A 2 7.305 4.314 33.076 1.00 19.82 C
ATOM 12 O2' U A 2 8.325 3.511 32.523 1.00 20.81 O
ATOM 13 C1' U A 2 6.308 3.427 33.814 1.00 20.11 C
ATOM 14 N1 U A 2 4.959 4.017 33.820 1.00 21.61 N
ATOM 15 C2 U A 2 4.141 3.723 32.747 1.00 17.29 C
ATOM 16 O2 U A 2 4.496 3.013 31.829 1.00 20.63 O
ATOM 17 N3 U A 2 2.900 4.287 32.790 1.00 12.76 N
ATOM 18 C4 U A 2 2.400 5.097 33.760 1.00 13.43 C
ATOM 19 O4 U A 2 1.268 5.555 33.619 1.00 14.87 O
ATOM 20 C5 U A 2 3.300 5.363 34.855 1.00 15.48 C
ATOM 21 C6 U A 2 4.522 4.828 34.845 1.00 16.18 C
ATOM 22 P A A 3 9.091 7.262 33.307 1.00 18.74 P
ATOM 23 OP1 A A 3 10.496 7.746 33.321 1.00 19.75 O
ATOM 24 OP2 A A 3 8.034 8.052 34.001 1.00 17.71 O
ATOM 25 O5' A A 3 8.627 7.078 31.790 1.00 20.65 O
TER
ATOM 1 O3' U B 2 -5.728 4.875 24.461 1.00 24.18 O
ATOM 2 P A B 3 -5.777 3.449 25.195 1.00 26.97 P
ATOM 3 OP1 A B 3 -6.541 2.526 24.327 1.00 28.63 O
ATOM 4 OP2 A B 3 -6.233 3.676 26.599 1.00 27.69 O
ATOM 5 O5' A B 3 -4.251 2.997 25.207 1.00 23.42 O
ATOM 6 C5' A B 3 -3.615 2.529 24.009 1.00 22.27 C
ATOM 7 C4' A B 3 -2.229 2.043 24.326 1.00 21.79 C
ATOM 8 O4' A B 3 -1.484 3.144 24.890 1.00 22.02 O
ATOM 9 C3' A B 3 -2.144 0.970 25.400 1.00 23.82 C
ATOM 10 O3' A B 3 -2.376 -0.330 24.872 1.00 25.25 O
ATOM 11 C2' A B 3 -0.717 1.136 25.903 1.00 21.15 C
ATOM 12 O2' A B 3 0.271 0.554 25.075 1.00 19.86 O
ATOM 13 C1' A B 3 -0.577 2.651 25.860 1.00 20.64 C
ATOM 14 N9 A B 3 -0.919 3.234 27.143 1.00 16.22 N
ATOM 15 C8 A B 3 -2.097 3.770 27.596 1.00 13.89 C
ATOM 16 N7 A B 3 -2.025 4.212 28.829 1.00 13.59 N
ATOM 17 C5 A B 3 -0.714 3.942 29.206 1.00 13.80 C
ATOM 18 C6 A B 3 0.007 4.157 30.393 1.00 16.14 C
ATOM 19 N6 A B 3 -0.508 4.739 31.469 1.00 17.37 N
ATOM 20 N1 A B 3 1.301 3.758 30.434 1.00 16.44 N
ATOM 21 C2 A B 3 1.824 3.192 29.342 1.00 13.15 C
ATOM 22 N3 A B 3 1.252 2.943 28.173 1.00 15.13 N
ATOM 23 C4 A B 3 -0.033 3.341 28.175 1.00 12.83 C
ATOM 24 P C B 4 -3.142 -1.416 25.761 1.00 25.03 P
ATOM 25 OP1 C B 4 -3.485 -2.573 24.907 1.00 29.26 O
ATOM 26 OP2 C B 4 -4.206 -0.704 26.513 1.00 22.65 O
ATOM 27 O5' C B 4 -2.039 -1.909 26.779 1.00 24.65 O
TER
ATOM 2 P U A 2 6.509 6.074 38.377 1.00 21.45 P
ATOM 3 OP1 U A 2 7.760 6.449 39.080 1.00 26.49 O
ATOM 4 OP2 U A 2 5.423 7.075 38.231 1.00 22.06 O
ATOM 5 O5' U A 2 6.895 5.572 36.922 1.00 17.81 O
ATOM 6 C5' U A 2 7.990 4.680 36.722 1.00 15.84 C
ATOM 7 C4' U A 2 7.956 4.142 35.324 1.00 16.98 C
ATOM 8 O4' U A 2 6.772 3.325 35.157 1.00 19.42 O
ATOM 9 C3' U A 2 7.820 5.171 34.221 1.00 18.98 C
ATOM 10 O3' U A 2 9.065 5.774 33.901 1.00 18.40 O
ATOM 11 C2' U A 2 7.305 4.314 33.076 1.00 19.82 C
ATOM 12 O2' U A 2 8.325 3.511 32.523 1.00 20.81 O
ATOM 13 C1' U A 2 6.308 3.427 33.814 1.00 20.11 C
ATOM 14 N1 U A 2 4.959 4.017 33.820 1.00 21.61 N
ATOM 15 C2 U A 2 4.141 3.723 32.747 1.00 17.29 C
ATOM 16 O2 U A 2 4.496 3.013 31.829 1.00 20.63 O
ATOM 17 N3 U A 2 2.900 4.287 32.790 1.00 12.76 N
ATOM 18 C4 U A 2 2.400 5.097 33.760 1.00 13.43 C
ATOM 19 O4 U A 2 1.268 5.555 33.619 1.00 14.87 O
ATOM 20 C5 U A 2 3.300 5.363 34.855 1.00 15.48 C
ATOM 21 C6 U A 2 4.522 4.828 34.845 1.00 16.18 C
ATOM 22 P A A 3 9.091 7.262 33.307 1.00 18.74 P
ATOM 23 OP1 A A 3 10.496 7.746 33.321 1.00 19.75 O
ATOM 24 OP2 A A 3 8.034 8.052 34.001 1.00 17.71 O
ATOM 25 O5' A A 3 8.627 7.078 31.790 1.00 20.65 O
TER
ATOM 1 O3' U B 2 -5.728 4.875 24.461 1.00 24.18 O
ATOM 2 P A B 3 -5.777 3.449 25.195 1.00 26.97 P
ATOM 3 OP1 A B 3 -6.541 2.526 24.327 1.00 28.63 O
ATOM 4 OP2 A B 3 -6.233 3.676 26.599 1.00 27.69 O
ATOM 5 O5' A B 3 -4.251 2.997 25.207 1.00 23.42 O
ATOM 6 C5' A B 3 -3.615 2.529 24.009 1.00 22.27 C
ATOM 7 C4' A B 3 -2.229 2.043 24.326 1.00 21.79 C
ATOM 8 O4' A B 3 -1.484 3.144 24.890 1.00 22.02 O
ATOM 9 C3' A B 3 -2.144 0.970 25.400 1.00 23.82 C
ATOM 10 O3' A B 3 -2.376 -0.330 24.872 1.00 25.25 O
ATOM 11 C2' A B 3 -0.717 1.136 25.903 1.00 21.15 C
ATOM 12 O2' A B 3 0.271 0.554 25.075 1.00 19.86 O
ATOM 13 C1' A B 3 -0.577 2.651 25.860 1.00 20.64 C
ATOM 14 N9 A B 3 -0.919 3.234 27.143 1.00 16.22 N
ATOM 15 C8 A B 3 -2.097 3.770 27.596 1.00 13.89 C
ATOM 16 N7 A B 3 -2.025 4.212 28.829 1.00 13.59 N
ATOM 17 C5 A B 3 -0.714 3.942 29.206 1.00 13.80 C
ATOM 18 C6 A B 3 0.007 4.157 30.393 1.00 16.14 C
ATOM 19 N6 A B 3 -0.508 4.739 31.469 1.00 17.37 N
ATOM 20 N1 A B 3 1.301 3.758 30.434 1.00 16.44 N
ATOM 21 C2 A B 3 1.824 3.192 29.342 1.00 13.15 C
ATOM 22 N3 A B 3 1.252 2.943 28.173 1.00 15.13 N
ATOM 23 C4 A B 3 -0.033 3.341 28.175 1.00 12.83 C
ATOM 24 P C B 4 -3.142 -1.416 25.761 1.00 25.03 P
ATOM 25 OP1 C B 4 -3.485 -2.573 24.907 1.00 29.26 O
ATOM 26 OP2 C B 4 -4.206 -0.704 26.513 1.00 22.65 O
ATOM 27 O5' C B 4 -2.039 -1.909 26.779 1.00 24.65 O
TER
Atoms:
C4: (2.400,5.097,33.760)
N3: (2.900,4.287,32.790)
OP1: (7.760,6.449,39.080)
OP2: (5.423,7.075,38.231)
C2: (4.141,3.723,32.747)
C1': (6.308,3.427,33.814)
C3': (7.820,5.171,34.221)
O5': (6.895,5.572,36.922)
O4': (6.772,3.325,35.157)
C5': (7.990,4.680,36.722)
P: (6.509,6.074,38.377)
C4': (7.956,4.142,35.324)
C2': (7.305,4.314,33.076)
O2': (8.325,3.511,32.523)
N1: (4.959,4.017,33.820)
O4: (1.268,5.555,33.619)
O2: (4.496,3.013,31.829)
C6: (4.522,4.828,34.845)
C5: (3.300,5.363,34.855)
O3': (9.065,5.774,33.901)
N3: (2.900,4.287,32.790)
OP1: (7.760,6.449,39.080)
OP2: (5.423,7.075,38.231)
C2: (4.141,3.723,32.747)
C1': (6.308,3.427,33.814)
C3': (7.820,5.171,34.221)
O5': (6.895,5.572,36.922)
O4': (6.772,3.325,35.157)
C5': (7.990,4.680,36.722)
P: (6.509,6.074,38.377)
C4': (7.956,4.142,35.324)
C2': (7.305,4.314,33.076)
O2': (8.325,3.511,32.523)
N1: (4.959,4.017,33.820)
O4: (1.268,5.555,33.619)
O2: (4.496,3.013,31.829)
C6: (4.522,4.828,34.845)
C5: (3.300,5.363,34.855)
O3': (9.065,5.774,33.901)
OP1: (-6.541,2.526,24.327)
OP2: (-6.233,3.676,26.599)
C3': (-2.144,0.970,25.400)
C1': (-0.577,2.651,25.860)
C5': (-3.615,2.529,24.009)
O4': (-1.484,3.144,24.890)
C8: (-2.097,3.770,27.596)
O2': (0.271,0.554,25.075)
C6: (0.007,4.157,30.393)
C5: (-0.714,3.942,29.206)
C4: (-0.033,3.341,28.175)
P: (-5.777,3.449,25.195)
C4': (-2.229,2.043,24.326)
C2': (-0.717,1.136,25.903)
C2: (1.824,3.192,29.342)
N1: (1.301,3.758,30.434)
N3: (1.252,2.943,28.173)
N6: (-0.508,4.739,31.469)
N7: (-2.025,4.212,28.829)
N9: (-0.919,3.234,27.143)
O5': (-4.251,2.997,25.207)
O3': (-2.376,-0.330,24.872)
OP2: (-6.233,3.676,26.599)
C3': (-2.144,0.970,25.400)
C1': (-0.577,2.651,25.860)
C5': (-3.615,2.529,24.009)
O4': (-1.484,3.144,24.890)
C8: (-2.097,3.770,27.596)
O2': (0.271,0.554,25.075)
C6: (0.007,4.157,30.393)
C5: (-0.714,3.942,29.206)
C4: (-0.033,3.341,28.175)
P: (-5.777,3.449,25.195)
C4': (-2.229,2.043,24.326)
C2': (-0.717,1.136,25.903)
C2: (1.824,3.192,29.342)
N1: (1.301,3.758,30.434)
N3: (1.252,2.943,28.173)
N6: (-0.508,4.739,31.469)
N7: (-2.025,4.212,28.829)
N9: (-0.919,3.234,27.143)
O5': (-4.251,2.997,25.207)
O3': (-2.376,-0.330,24.872)
Image (generated by PyMOL):