Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:3105:371
Extra
PDB:
ATOM 1 O3' C A 104 22.855 -45.202 6.032 1.00 66.58 O
ATOM 2 P U A 105 22.432 -46.684 5.562 1.00 66.96 P
ATOM 3 OP1 U A 105 20.985 -46.631 5.400 1.00 67.26 O
ATOM 4 OP2 U A 105 23.014 -47.663 6.527 1.00 66.51 O
ATOM 5 O5' U A 105 23.131 -46.839 4.145 1.00 67.84 O
ATOM 6 C5' U A 105 23.274 -45.720 3.283 1.00 68.11 C
ATOM 7 C4' U A 105 24.489 -45.860 2.395 1.00 68.59 C
ATOM 8 O4' U A 105 25.690 -45.451 3.114 1.00 67.85 O
ATOM 9 C3' U A 105 24.791 -47.271 1.906 1.00 69.26 C
ATOM 10 O3' U A 105 24.029 -47.613 0.767 1.00 70.23 O
ATOM 11 C2' U A 105 26.297 -47.223 1.646 1.00 69.25 C
ATOM 12 O2' U A 105 26.583 -46.639 0.386 1.00 69.93 O
ATOM 13 C1' U A 105 26.781 -46.271 2.748 1.00 68.18 C
ATOM 14 N1 U A 105 27.228 -47.018 3.939 1.00 67.52 N
ATOM 15 C2 U A 105 28.452 -47.652 3.936 1.00 67.56 C
ATOM 16 O2 U A 105 29.232 -47.593 3.010 1.00 68.09 O
ATOM 17 N3 U A 105 28.761 -48.367 5.055 1.00 66.96 N
ATOM 18 C4 U A 105 27.975 -48.520 6.156 1.00 66.35 C
ATOM 19 O4 U A 105 28.367 -49.182 7.108 1.00 65.85 O
ATOM 20 C5 U A 105 26.720 -47.871 6.071 1.00 66.38 C
ATOM 21 C6 U A 105 26.394 -47.169 4.997 1.00 66.95 C
ATOM 22 P C A 106 23.473 -49.104 0.544 1.00 77.61 P
ATOM 23 OP1 C A 106 22.438 -49.009 -0.502 1.00 78.44 O
ATOM 24 OP2 C A 106 23.094 -49.644 1.862 1.00 76.91 O
ATOM 25 O5' C A 106 24.742 -49.889 -0.018 1.00 78.07 O
TER
ATOM 1 O3' G B 70 38.975 -54.450 6.729 1.00 71.68 O
ATOM 2 P A B 71 39.469 -52.998 7.204 1.00 83.71 P
ATOM 3 OP1 A B 71 40.955 -53.062 7.314 1.00 83.54 O
ATOM 4 OP2 A B 71 38.672 -52.627 8.411 1.00 82.84 O
ATOM 5 O5' A B 71 39.045 -52.072 5.981 1.00 84.32 O
ATOM 6 C5' A B 71 39.404 -52.415 4.663 1.00 85.32 C
ATOM 7 C4' A B 71 38.672 -51.569 3.667 1.00 85.83 C
ATOM 8 O4' A B 71 37.311 -52.051 3.502 1.00 86.19 O
ATOM 9 C3' A B 71 38.487 -50.107 4.032 1.00 85.17 C
ATOM 10 O3' A B 71 39.667 -49.335 3.854 1.00 85.00 O
ATOM 11 C2' A B 71 37.354 -49.714 3.103 1.00 85.80 C
ATOM 12 O2' A B 71 37.837 -49.605 1.769 1.00 86.68 O
ATOM 13 C1' A B 71 36.466 -50.961 3.189 1.00 86.16 C
ATOM 14 N9 A B 71 35.436 -50.842 4.245 1.00 85.47 N
ATOM 15 C8 A B 71 35.506 -51.264 5.549 1.00 84.69 C
ATOM 16 N7 A B 71 34.436 -51.031 6.265 1.00 84.22 N
ATOM 17 C5 A B 71 33.602 -50.403 5.379 1.00 84.73 C
ATOM 18 C6 A B 71 32.318 -49.912 5.537 1.00 84.61 C
ATOM 19 N6 A B 71 31.642 -49.969 6.673 1.00 83.93 N
ATOM 20 N1 A B 71 31.741 -49.361 4.467 1.00 85.25 N
ATOM 21 C2 A B 71 32.415 -49.315 3.313 1.00 85.97 C
ATOM 22 N3 A B 71 33.643 -49.734 3.037 1.00 86.16 N
ATOM 23 C4 A B 71 34.189 -50.278 4.135 1.00 85.50 C
ATOM 24 P C B 72 39.880 -47.943 4.658 1.00116.74 P
ATOM 25 OP1 C B 72 41.268 -47.956 5.202 1.00116.27 O
ATOM 26 OP2 C B 72 38.744 -47.805 5.612 1.00116.12 O
ATOM 27 O5' C B 72 39.765 -46.842 3.501 1.00117.27 O
TER
ATOM 2 P U A 105 22.432 -46.684 5.562 1.00 66.96 P
ATOM 3 OP1 U A 105 20.985 -46.631 5.400 1.00 67.26 O
ATOM 4 OP2 U A 105 23.014 -47.663 6.527 1.00 66.51 O
ATOM 5 O5' U A 105 23.131 -46.839 4.145 1.00 67.84 O
ATOM 6 C5' U A 105 23.274 -45.720 3.283 1.00 68.11 C
ATOM 7 C4' U A 105 24.489 -45.860 2.395 1.00 68.59 C
ATOM 8 O4' U A 105 25.690 -45.451 3.114 1.00 67.85 O
ATOM 9 C3' U A 105 24.791 -47.271 1.906 1.00 69.26 C
ATOM 10 O3' U A 105 24.029 -47.613 0.767 1.00 70.23 O
ATOM 11 C2' U A 105 26.297 -47.223 1.646 1.00 69.25 C
ATOM 12 O2' U A 105 26.583 -46.639 0.386 1.00 69.93 O
ATOM 13 C1' U A 105 26.781 -46.271 2.748 1.00 68.18 C
ATOM 14 N1 U A 105 27.228 -47.018 3.939 1.00 67.52 N
ATOM 15 C2 U A 105 28.452 -47.652 3.936 1.00 67.56 C
ATOM 16 O2 U A 105 29.232 -47.593 3.010 1.00 68.09 O
ATOM 17 N3 U A 105 28.761 -48.367 5.055 1.00 66.96 N
ATOM 18 C4 U A 105 27.975 -48.520 6.156 1.00 66.35 C
ATOM 19 O4 U A 105 28.367 -49.182 7.108 1.00 65.85 O
ATOM 20 C5 U A 105 26.720 -47.871 6.071 1.00 66.38 C
ATOM 21 C6 U A 105 26.394 -47.169 4.997 1.00 66.95 C
ATOM 22 P C A 106 23.473 -49.104 0.544 1.00 77.61 P
ATOM 23 OP1 C A 106 22.438 -49.009 -0.502 1.00 78.44 O
ATOM 24 OP2 C A 106 23.094 -49.644 1.862 1.00 76.91 O
ATOM 25 O5' C A 106 24.742 -49.889 -0.018 1.00 78.07 O
TER
ATOM 1 O3' G B 70 38.975 -54.450 6.729 1.00 71.68 O
ATOM 2 P A B 71 39.469 -52.998 7.204 1.00 83.71 P
ATOM 3 OP1 A B 71 40.955 -53.062 7.314 1.00 83.54 O
ATOM 4 OP2 A B 71 38.672 -52.627 8.411 1.00 82.84 O
ATOM 5 O5' A B 71 39.045 -52.072 5.981 1.00 84.32 O
ATOM 6 C5' A B 71 39.404 -52.415 4.663 1.00 85.32 C
ATOM 7 C4' A B 71 38.672 -51.569 3.667 1.00 85.83 C
ATOM 8 O4' A B 71 37.311 -52.051 3.502 1.00 86.19 O
ATOM 9 C3' A B 71 38.487 -50.107 4.032 1.00 85.17 C
ATOM 10 O3' A B 71 39.667 -49.335 3.854 1.00 85.00 O
ATOM 11 C2' A B 71 37.354 -49.714 3.103 1.00 85.80 C
ATOM 12 O2' A B 71 37.837 -49.605 1.769 1.00 86.68 O
ATOM 13 C1' A B 71 36.466 -50.961 3.189 1.00 86.16 C
ATOM 14 N9 A B 71 35.436 -50.842 4.245 1.00 85.47 N
ATOM 15 C8 A B 71 35.506 -51.264 5.549 1.00 84.69 C
ATOM 16 N7 A B 71 34.436 -51.031 6.265 1.00 84.22 N
ATOM 17 C5 A B 71 33.602 -50.403 5.379 1.00 84.73 C
ATOM 18 C6 A B 71 32.318 -49.912 5.537 1.00 84.61 C
ATOM 19 N6 A B 71 31.642 -49.969 6.673 1.00 83.93 N
ATOM 20 N1 A B 71 31.741 -49.361 4.467 1.00 85.25 N
ATOM 21 C2 A B 71 32.415 -49.315 3.313 1.00 85.97 C
ATOM 22 N3 A B 71 33.643 -49.734 3.037 1.00 86.16 N
ATOM 23 C4 A B 71 34.189 -50.278 4.135 1.00 85.50 C
ATOM 24 P C B 72 39.880 -47.943 4.658 1.00116.74 P
ATOM 25 OP1 C B 72 41.268 -47.956 5.202 1.00116.27 O
ATOM 26 OP2 C B 72 38.744 -47.805 5.612 1.00116.12 O
ATOM 27 O5' C B 72 39.765 -46.842 3.501 1.00117.27 O
TER
Atoms:
C4: (27.975,-48.520,6.156)
N3: (28.761,-48.367,5.055)
OP1: (20.985,-46.631,5.400)
OP2: (23.014,-47.663,6.527)
C2: (28.452,-47.652,3.936)
C1': (26.781,-46.271,2.748)
C3': (24.791,-47.271,1.906)
O5': (23.131,-46.839,4.145)
O4': (25.690,-45.451,3.114)
C5': (23.274,-45.720,3.283)
P: (22.432,-46.684,5.562)
C4': (24.489,-45.860,2.395)
C2': (26.297,-47.223,1.646)
O2': (26.583,-46.639,0.386)
N1: (27.228,-47.018,3.939)
O4: (28.367,-49.182,7.108)
O2: (29.232,-47.593,3.010)
C6: (26.394,-47.169,4.997)
C5: (26.720,-47.871,6.071)
O3': (24.029,-47.613,0.767)
N3: (28.761,-48.367,5.055)
OP1: (20.985,-46.631,5.400)
OP2: (23.014,-47.663,6.527)
C2: (28.452,-47.652,3.936)
C1': (26.781,-46.271,2.748)
C3': (24.791,-47.271,1.906)
O5': (23.131,-46.839,4.145)
O4': (25.690,-45.451,3.114)
C5': (23.274,-45.720,3.283)
P: (22.432,-46.684,5.562)
C4': (24.489,-45.860,2.395)
C2': (26.297,-47.223,1.646)
O2': (26.583,-46.639,0.386)
N1: (27.228,-47.018,3.939)
O4: (28.367,-49.182,7.108)
O2: (29.232,-47.593,3.010)
C6: (26.394,-47.169,4.997)
C5: (26.720,-47.871,6.071)
O3': (24.029,-47.613,0.767)
OP1: (40.955,-53.062,7.314)
OP2: (38.672,-52.627,8.411)
C3': (38.487,-50.107,4.032)
C1': (36.466,-50.961,3.189)
C5': (39.404,-52.415,4.663)
O4': (37.311,-52.051,3.502)
C8: (35.506,-51.264,5.549)
O2': (37.837,-49.605,1.769)
C6: (32.318,-49.912,5.537)
C5: (33.602,-50.403,5.379)
C4: (34.189,-50.278,4.135)
P: (39.469,-52.998,7.204)
C4': (38.672,-51.569,3.667)
C2': (37.354,-49.714,3.103)
C2: (32.415,-49.315,3.313)
N1: (31.741,-49.361,4.467)
N3: (33.643,-49.734,3.037)
N6: (31.642,-49.969,6.673)
N7: (34.436,-51.031,6.265)
N9: (35.436,-50.842,4.245)
O5': (39.045,-52.072,5.981)
O3': (39.667,-49.335,3.854)
OP2: (38.672,-52.627,8.411)
C3': (38.487,-50.107,4.032)
C1': (36.466,-50.961,3.189)
C5': (39.404,-52.415,4.663)
O4': (37.311,-52.051,3.502)
C8: (35.506,-51.264,5.549)
O2': (37.837,-49.605,1.769)
C6: (32.318,-49.912,5.537)
C5: (33.602,-50.403,5.379)
C4: (34.189,-50.278,4.135)
P: (39.469,-52.998,7.204)
C4': (38.672,-51.569,3.667)
C2': (37.354,-49.714,3.103)
C2: (32.415,-49.315,3.313)
N1: (31.741,-49.361,4.467)
N3: (33.643,-49.734,3.037)
N6: (31.642,-49.969,6.673)
N7: (34.436,-51.031,6.265)
N9: (35.436,-50.842,4.245)
O5': (39.045,-52.072,5.981)
O3': (39.667,-49.335,3.854)
Image (generated by PyMOL):