Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2561:A2509
Extra
PDB:
ATOM 1 O3' G A2560 -83.598 -53.614 -29.772 1.00 0.01 O
ATOM 2 P U A2561 -83.357 -53.537 -28.188 1.00 0.01 P
ATOM 3 OP1 U A2561 -83.655 -52.164 -27.774 1.00 0.01 O
ATOM 4 OP2 U A2561 -82.000 -54.092 -27.904 1.00 0.01 O
ATOM 5 O5' U A2561 -84.462 -54.505 -27.622 1.00 0.01 O
ATOM 6 C5' U A2561 -85.825 -54.214 -27.788 1.00 0.01 C
ATOM 7 C4' U A2561 -86.670 -55.264 -27.140 1.00 0.01 C
ATOM 8 O4' U A2561 -86.677 -56.461 -27.947 1.00 0.01 O
ATOM 9 C3' U A2561 -86.186 -55.738 -25.800 1.00 0.01 C
ATOM 10 O3' U A2561 -86.556 -54.866 -24.771 1.00 0.01 O
ATOM 11 C2' U A2561 -86.805 -57.120 -25.693 1.00 0.01 C
ATOM 12 O2' U A2561 -88.172 -57.037 -25.382 1.00 0.01 O
ATOM 13 C1' U A2561 -86.671 -57.599 -27.121 1.00 0.01 C
ATOM 14 N1 U A2561 -85.412 -58.288 -27.345 1.00 0.01 N
ATOM 15 C2 U A2561 -85.357 -59.618 -27.086 1.00 0.01 C
ATOM 16 O2 U A2561 -86.337 -60.181 -26.660 1.00 0.01 O
ATOM 17 N3 U A2561 -84.162 -60.214 -27.340 1.00 0.01 N
ATOM 18 C4 U A2561 -83.061 -59.577 -27.840 1.00 0.01 C
ATOM 19 O4 U A2561 -82.010 -60.184 -28.036 1.00 0.01 O
ATOM 20 C5 U A2561 -83.222 -58.182 -28.091 1.00 0.01 C
ATOM 21 C6 U A2561 -84.370 -57.589 -27.844 1.00 0.01 C
ATOM 22 P G A2562 -85.988 -55.075 -23.310 1.00 0.01 P
ATOM 23 OP1 G A2562 -86.474 -53.940 -22.511 1.00 0.01 O
ATOM 24 OP2 G A2562 -84.514 -55.313 -23.417 1.00 0.01 O
ATOM 25 O5' G A2562 -86.722 -56.403 -22.859 1.00 0.01 O
TER
ATOM 1 O3' C B2508 -81.404 -71.762 -26.471 1.00 0.01 O
ATOM 2 P A B2509 -82.588 -71.409 -27.470 1.00 0.01 P
ATOM 3 OP1 A B2509 -83.253 -72.671 -27.778 1.00 0.01 O
ATOM 4 OP2 A B2509 -82.039 -70.627 -28.574 1.00 0.01 O
ATOM 5 O5' A B2509 -83.532 -70.518 -26.591 1.00 0.01 O
ATOM 6 C5' A B2509 -84.621 -71.088 -25.909 1.00 0.01 C
ATOM 7 C4' A B2509 -85.668 -70.063 -25.621 1.00 0.01 C
ATOM 8 O4' A B2509 -85.054 -68.895 -25.046 1.00 0.01 O
ATOM 9 C3' A B2509 -86.409 -69.540 -26.819 1.00 0.01 C
ATOM 10 O3' A B2509 -87.474 -70.387 -27.184 1.00 0.01 O
ATOM 11 C2' A B2509 -86.846 -68.153 -26.356 1.00 0.01 C
ATOM 12 O2' A B2509 -87.970 -68.228 -25.502 1.00 0.01 O
ATOM 13 C1' A B2509 -85.674 -67.735 -25.513 1.00 0.01 C
ATOM 14 N9 A B2509 -84.681 -66.970 -26.251 1.00 0.01 N
ATOM 15 C8 A B2509 -83.570 -67.474 -26.845 1.00 0.01 C
ATOM 16 N7 A B2509 -82.794 -66.565 -27.353 1.00 0.01 N
ATOM 17 C5 A B2509 -83.442 -65.363 -27.041 1.00 0.01 C
ATOM 18 C6 A B2509 -83.157 -63.997 -27.296 1.00 0.01 C
ATOM 19 N6 A B2509 -82.098 -63.573 -27.956 1.00 0.01 N
ATOM 20 N1 A B2509 -83.993 -63.060 -26.850 1.00 0.01 N
ATOM 21 C2 A B2509 -85.060 -63.466 -26.183 1.00 0.01 C
ATOM 22 N3 A B2509 -85.452 -64.692 -25.887 1.00 0.01 N
ATOM 23 C4 A B2509 -84.599 -65.612 -26.342 1.00 0.01 C
ATOM 24 P C B2510 -88.032 -70.409 -28.674 1.00 0.01 P
ATOM 25 OP1 C B2510 -89.233 -71.246 -28.671 1.00 0.01 O
ATOM 26 OP2 C B2510 -86.931 -70.767 -29.553 1.00 0.01 O
ATOM 27 O5' C B2510 -88.430 -68.925 -28.911 1.00 0.01 O
TER
ATOM 2 P U A2561 -83.357 -53.537 -28.188 1.00 0.01 P
ATOM 3 OP1 U A2561 -83.655 -52.164 -27.774 1.00 0.01 O
ATOM 4 OP2 U A2561 -82.000 -54.092 -27.904 1.00 0.01 O
ATOM 5 O5' U A2561 -84.462 -54.505 -27.622 1.00 0.01 O
ATOM 6 C5' U A2561 -85.825 -54.214 -27.788 1.00 0.01 C
ATOM 7 C4' U A2561 -86.670 -55.264 -27.140 1.00 0.01 C
ATOM 8 O4' U A2561 -86.677 -56.461 -27.947 1.00 0.01 O
ATOM 9 C3' U A2561 -86.186 -55.738 -25.800 1.00 0.01 C
ATOM 10 O3' U A2561 -86.556 -54.866 -24.771 1.00 0.01 O
ATOM 11 C2' U A2561 -86.805 -57.120 -25.693 1.00 0.01 C
ATOM 12 O2' U A2561 -88.172 -57.037 -25.382 1.00 0.01 O
ATOM 13 C1' U A2561 -86.671 -57.599 -27.121 1.00 0.01 C
ATOM 14 N1 U A2561 -85.412 -58.288 -27.345 1.00 0.01 N
ATOM 15 C2 U A2561 -85.357 -59.618 -27.086 1.00 0.01 C
ATOM 16 O2 U A2561 -86.337 -60.181 -26.660 1.00 0.01 O
ATOM 17 N3 U A2561 -84.162 -60.214 -27.340 1.00 0.01 N
ATOM 18 C4 U A2561 -83.061 -59.577 -27.840 1.00 0.01 C
ATOM 19 O4 U A2561 -82.010 -60.184 -28.036 1.00 0.01 O
ATOM 20 C5 U A2561 -83.222 -58.182 -28.091 1.00 0.01 C
ATOM 21 C6 U A2561 -84.370 -57.589 -27.844 1.00 0.01 C
ATOM 22 P G A2562 -85.988 -55.075 -23.310 1.00 0.01 P
ATOM 23 OP1 G A2562 -86.474 -53.940 -22.511 1.00 0.01 O
ATOM 24 OP2 G A2562 -84.514 -55.313 -23.417 1.00 0.01 O
ATOM 25 O5' G A2562 -86.722 -56.403 -22.859 1.00 0.01 O
TER
ATOM 1 O3' C B2508 -81.404 -71.762 -26.471 1.00 0.01 O
ATOM 2 P A B2509 -82.588 -71.409 -27.470 1.00 0.01 P
ATOM 3 OP1 A B2509 -83.253 -72.671 -27.778 1.00 0.01 O
ATOM 4 OP2 A B2509 -82.039 -70.627 -28.574 1.00 0.01 O
ATOM 5 O5' A B2509 -83.532 -70.518 -26.591 1.00 0.01 O
ATOM 6 C5' A B2509 -84.621 -71.088 -25.909 1.00 0.01 C
ATOM 7 C4' A B2509 -85.668 -70.063 -25.621 1.00 0.01 C
ATOM 8 O4' A B2509 -85.054 -68.895 -25.046 1.00 0.01 O
ATOM 9 C3' A B2509 -86.409 -69.540 -26.819 1.00 0.01 C
ATOM 10 O3' A B2509 -87.474 -70.387 -27.184 1.00 0.01 O
ATOM 11 C2' A B2509 -86.846 -68.153 -26.356 1.00 0.01 C
ATOM 12 O2' A B2509 -87.970 -68.228 -25.502 1.00 0.01 O
ATOM 13 C1' A B2509 -85.674 -67.735 -25.513 1.00 0.01 C
ATOM 14 N9 A B2509 -84.681 -66.970 -26.251 1.00 0.01 N
ATOM 15 C8 A B2509 -83.570 -67.474 -26.845 1.00 0.01 C
ATOM 16 N7 A B2509 -82.794 -66.565 -27.353 1.00 0.01 N
ATOM 17 C5 A B2509 -83.442 -65.363 -27.041 1.00 0.01 C
ATOM 18 C6 A B2509 -83.157 -63.997 -27.296 1.00 0.01 C
ATOM 19 N6 A B2509 -82.098 -63.573 -27.956 1.00 0.01 N
ATOM 20 N1 A B2509 -83.993 -63.060 -26.850 1.00 0.01 N
ATOM 21 C2 A B2509 -85.060 -63.466 -26.183 1.00 0.01 C
ATOM 22 N3 A B2509 -85.452 -64.692 -25.887 1.00 0.01 N
ATOM 23 C4 A B2509 -84.599 -65.612 -26.342 1.00 0.01 C
ATOM 24 P C B2510 -88.032 -70.409 -28.674 1.00 0.01 P
ATOM 25 OP1 C B2510 -89.233 -71.246 -28.671 1.00 0.01 O
ATOM 26 OP2 C B2510 -86.931 -70.767 -29.553 1.00 0.01 O
ATOM 27 O5' C B2510 -88.430 -68.925 -28.911 1.00 0.01 O
TER
Atoms:
C4: (-83.061,-59.577,-27.840)
N3: (-84.162,-60.214,-27.340)
OP1: (-83.655,-52.164,-27.774)
OP2: (-82.000,-54.092,-27.904)
C2: (-85.357,-59.618,-27.086)
C1': (-86.671,-57.599,-27.121)
C3': (-86.186,-55.738,-25.800)
O5': (-84.462,-54.505,-27.622)
O4': (-86.677,-56.461,-27.947)
C5': (-85.825,-54.214,-27.788)
P: (-83.357,-53.537,-28.188)
C4': (-86.670,-55.264,-27.140)
C2': (-86.805,-57.120,-25.693)
O2': (-88.172,-57.037,-25.382)
N1: (-85.412,-58.288,-27.345)
O4: (-82.010,-60.184,-28.036)
O2: (-86.337,-60.181,-26.660)
C6: (-84.370,-57.589,-27.844)
C5: (-83.222,-58.182,-28.091)
O3': (-86.556,-54.866,-24.771)
N3: (-84.162,-60.214,-27.340)
OP1: (-83.655,-52.164,-27.774)
OP2: (-82.000,-54.092,-27.904)
C2: (-85.357,-59.618,-27.086)
C1': (-86.671,-57.599,-27.121)
C3': (-86.186,-55.738,-25.800)
O5': (-84.462,-54.505,-27.622)
O4': (-86.677,-56.461,-27.947)
C5': (-85.825,-54.214,-27.788)
P: (-83.357,-53.537,-28.188)
C4': (-86.670,-55.264,-27.140)
C2': (-86.805,-57.120,-25.693)
O2': (-88.172,-57.037,-25.382)
N1: (-85.412,-58.288,-27.345)
O4: (-82.010,-60.184,-28.036)
O2: (-86.337,-60.181,-26.660)
C6: (-84.370,-57.589,-27.844)
C5: (-83.222,-58.182,-28.091)
O3': (-86.556,-54.866,-24.771)
OP1: (-83.253,-72.671,-27.778)
OP2: (-82.039,-70.627,-28.574)
C3': (-86.409,-69.540,-26.819)
C1': (-85.674,-67.735,-25.513)
C5': (-84.621,-71.088,-25.909)
O4': (-85.054,-68.895,-25.046)
C8: (-83.570,-67.474,-26.845)
O2': (-87.970,-68.228,-25.502)
C6: (-83.157,-63.997,-27.296)
C5: (-83.442,-65.363,-27.041)
C4: (-84.599,-65.612,-26.342)
P: (-82.588,-71.409,-27.470)
C4': (-85.668,-70.063,-25.621)
C2': (-86.846,-68.153,-26.356)
C2: (-85.060,-63.466,-26.183)
N1: (-83.993,-63.060,-26.850)
N3: (-85.452,-64.692,-25.887)
N6: (-82.098,-63.573,-27.956)
N7: (-82.794,-66.565,-27.353)
N9: (-84.681,-66.970,-26.251)
O5': (-83.532,-70.518,-26.591)
O3': (-87.474,-70.387,-27.184)
OP2: (-82.039,-70.627,-28.574)
C3': (-86.409,-69.540,-26.819)
C1': (-85.674,-67.735,-25.513)
C5': (-84.621,-71.088,-25.909)
O4': (-85.054,-68.895,-25.046)
C8: (-83.570,-67.474,-26.845)
O2': (-87.970,-68.228,-25.502)
C6: (-83.157,-63.997,-27.296)
C5: (-83.442,-65.363,-27.041)
C4: (-84.599,-65.612,-26.342)
P: (-82.588,-71.409,-27.470)
C4': (-85.668,-70.063,-25.621)
C2': (-86.846,-68.153,-26.356)
C2: (-85.060,-63.466,-26.183)
N1: (-83.993,-63.060,-26.850)
N3: (-85.452,-64.692,-25.887)
N6: (-82.098,-63.573,-27.956)
N7: (-82.794,-66.565,-27.353)
N9: (-84.681,-66.970,-26.251)
O5': (-83.532,-70.518,-26.591)
O3': (-87.474,-70.387,-27.184)
Image (generated by PyMOL):