Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01225:01049
Extra
PDB:
ATOM 1 O3' G A1224 0.996 95.620 90.120 1.00 40.36 O
ATOM 2 P U A1225 1.609 95.234 88.689 1.00 41.23 P
ATOM 3 OP1 U A1225 0.540 94.646 87.831 1.00 40.03 O
ATOM 4 OP2 U A1225 2.840 94.443 88.958 1.00 40.60 O
ATOM 5 O5' U A1225 2.026 96.649 88.086 1.00 40.49 O
ATOM 6 C5' U A1225 1.029 97.634 87.754 1.00 39.34 C
ATOM 7 C4' U A1225 1.681 98.915 87.278 1.00 39.85 C
ATOM 8 O4' U A1225 2.380 99.553 88.382 1.00 40.39 O
ATOM 9 C3' U A1225 2.752 98.785 86.205 1.00 38.83 C
ATOM 10 O3' U A1225 2.241 98.650 84.893 1.00 38.95 O
ATOM 11 C2' U A1225 3.509 100.089 86.366 1.00 38.99 C
ATOM 12 O2' U A1225 2.829 101.175 85.773 1.00 38.99 O
ATOM 13 C1' U A1225 3.531 100.227 87.890 1.00 40.43 C
ATOM 14 N1 U A1225 4.731 99.574 88.439 1.00 42.06 N
ATOM 15 C2 U A1225 5.908 100.305 88.472 1.00 41.78 C
ATOM 16 O2 U A1225 5.970 101.480 88.154 1.00 42.14 O
ATOM 17 N3 U A1225 7.008 99.610 88.897 1.00 41.48 N
ATOM 18 C4 U A1225 7.056 98.297 89.301 1.00 42.00 C
ATOM 19 O4 U A1225 8.144 97.788 89.565 1.00 41.41 O
ATOM 20 C5 U A1225 5.795 97.622 89.288 1.00 42.26 C
ATOM 21 C6 U A1225 4.705 98.265 88.872 1.00 41.49 C
ATOM 22 P C A1226 3.139 97.937 83.769 1.00 41.12 P
ATOM 23 OP1 C A1226 2.288 97.745 82.565 1.00 42.88 O
ATOM 24 OP2 C A1226 3.795 96.765 84.394 1.00 35.82 O
ATOM 25 O5' C A1226 4.265 99.012 83.424 1.00 39.96 O
TER
ATOM 1 O3' G B1048 18.740 102.244 89.076 1.00 36.84 O
ATOM 2 P A B1049 17.801 103.007 90.132 1.00 37.18 P
ATOM 3 OP1 A B1049 18.511 104.216 90.602 1.00 37.34 O
ATOM 4 OP2 A B1049 17.336 102.003 91.117 1.00 39.24 O
ATOM 5 O5' A B1049 16.555 103.490 89.266 1.00 39.68 O
ATOM 6 C5' A B1049 16.674 104.607 88.365 1.00 42.83 C
ATOM 7 C4' A B1049 15.307 105.107 87.953 1.00 44.45 C
ATOM 8 O4' A B1049 14.630 104.084 87.183 1.00 45.85 O
ATOM 9 C3' A B1049 14.342 105.424 89.082 1.00 43.96 C
ATOM 10 O3' A B1049 14.545 106.725 89.610 1.00 43.21 O
ATOM 11 C2' A B1049 12.992 105.291 88.396 1.00 44.36 C
ATOM 12 O2' A B1049 12.679 106.407 87.590 1.00 45.96 O
ATOM 13 C1' A B1049 13.246 104.086 87.495 1.00 44.58 C
ATOM 14 N9 A B1049 12.943 102.820 88.160 1.00 45.75 N
ATOM 15 C8 A B1049 13.836 101.934 88.711 1.00 45.44 C
ATOM 16 N7 A B1049 13.274 100.870 89.222 1.00 46.82 N
ATOM 17 C5 A B1049 11.920 101.067 88.996 1.00 45.18 C
ATOM 18 C6 A B1049 10.797 100.292 89.295 1.00 44.49 C
ATOM 19 N6 A B1049 10.857 99.113 89.916 1.00 44.46 N
ATOM 20 N1 A B1049 9.591 100.773 88.935 1.00 44.30 N
ATOM 21 C2 A B1049 9.531 101.955 88.320 1.00 43.21 C
ATOM 22 N3 A B1049 10.513 102.775 87.984 1.00 43.95 N
ATOM 23 C4 A B1049 11.700 102.267 88.352 1.00 45.10 C
ATOM 24 P U B1050 14.324 106.983 91.175 1.00 43.10 P
ATOM 25 OP1 U B1050 14.709 108.394 91.450 1.00 43.56 O
ATOM 26 OP2 U B1050 14.997 105.875 91.916 1.00 43.44 O
ATOM 27 O5' U B1050 12.750 106.836 91.367 1.00 42.44 O
TER
ATOM 2 P U A1225 1.609 95.234 88.689 1.00 41.23 P
ATOM 3 OP1 U A1225 0.540 94.646 87.831 1.00 40.03 O
ATOM 4 OP2 U A1225 2.840 94.443 88.958 1.00 40.60 O
ATOM 5 O5' U A1225 2.026 96.649 88.086 1.00 40.49 O
ATOM 6 C5' U A1225 1.029 97.634 87.754 1.00 39.34 C
ATOM 7 C4' U A1225 1.681 98.915 87.278 1.00 39.85 C
ATOM 8 O4' U A1225 2.380 99.553 88.382 1.00 40.39 O
ATOM 9 C3' U A1225 2.752 98.785 86.205 1.00 38.83 C
ATOM 10 O3' U A1225 2.241 98.650 84.893 1.00 38.95 O
ATOM 11 C2' U A1225 3.509 100.089 86.366 1.00 38.99 C
ATOM 12 O2' U A1225 2.829 101.175 85.773 1.00 38.99 O
ATOM 13 C1' U A1225 3.531 100.227 87.890 1.00 40.43 C
ATOM 14 N1 U A1225 4.731 99.574 88.439 1.00 42.06 N
ATOM 15 C2 U A1225 5.908 100.305 88.472 1.00 41.78 C
ATOM 16 O2 U A1225 5.970 101.480 88.154 1.00 42.14 O
ATOM 17 N3 U A1225 7.008 99.610 88.897 1.00 41.48 N
ATOM 18 C4 U A1225 7.056 98.297 89.301 1.00 42.00 C
ATOM 19 O4 U A1225 8.144 97.788 89.565 1.00 41.41 O
ATOM 20 C5 U A1225 5.795 97.622 89.288 1.00 42.26 C
ATOM 21 C6 U A1225 4.705 98.265 88.872 1.00 41.49 C
ATOM 22 P C A1226 3.139 97.937 83.769 1.00 41.12 P
ATOM 23 OP1 C A1226 2.288 97.745 82.565 1.00 42.88 O
ATOM 24 OP2 C A1226 3.795 96.765 84.394 1.00 35.82 O
ATOM 25 O5' C A1226 4.265 99.012 83.424 1.00 39.96 O
TER
ATOM 1 O3' G B1048 18.740 102.244 89.076 1.00 36.84 O
ATOM 2 P A B1049 17.801 103.007 90.132 1.00 37.18 P
ATOM 3 OP1 A B1049 18.511 104.216 90.602 1.00 37.34 O
ATOM 4 OP2 A B1049 17.336 102.003 91.117 1.00 39.24 O
ATOM 5 O5' A B1049 16.555 103.490 89.266 1.00 39.68 O
ATOM 6 C5' A B1049 16.674 104.607 88.365 1.00 42.83 C
ATOM 7 C4' A B1049 15.307 105.107 87.953 1.00 44.45 C
ATOM 8 O4' A B1049 14.630 104.084 87.183 1.00 45.85 O
ATOM 9 C3' A B1049 14.342 105.424 89.082 1.00 43.96 C
ATOM 10 O3' A B1049 14.545 106.725 89.610 1.00 43.21 O
ATOM 11 C2' A B1049 12.992 105.291 88.396 1.00 44.36 C
ATOM 12 O2' A B1049 12.679 106.407 87.590 1.00 45.96 O
ATOM 13 C1' A B1049 13.246 104.086 87.495 1.00 44.58 C
ATOM 14 N9 A B1049 12.943 102.820 88.160 1.00 45.75 N
ATOM 15 C8 A B1049 13.836 101.934 88.711 1.00 45.44 C
ATOM 16 N7 A B1049 13.274 100.870 89.222 1.00 46.82 N
ATOM 17 C5 A B1049 11.920 101.067 88.996 1.00 45.18 C
ATOM 18 C6 A B1049 10.797 100.292 89.295 1.00 44.49 C
ATOM 19 N6 A B1049 10.857 99.113 89.916 1.00 44.46 N
ATOM 20 N1 A B1049 9.591 100.773 88.935 1.00 44.30 N
ATOM 21 C2 A B1049 9.531 101.955 88.320 1.00 43.21 C
ATOM 22 N3 A B1049 10.513 102.775 87.984 1.00 43.95 N
ATOM 23 C4 A B1049 11.700 102.267 88.352 1.00 45.10 C
ATOM 24 P U B1050 14.324 106.983 91.175 1.00 43.10 P
ATOM 25 OP1 U B1050 14.709 108.394 91.450 1.00 43.56 O
ATOM 26 OP2 U B1050 14.997 105.875 91.916 1.00 43.44 O
ATOM 27 O5' U B1050 12.750 106.836 91.367 1.00 42.44 O
TER
Atoms:
C4: (7.056,98.297,89.301)
N3: (7.008,99.610,88.897)
OP1: (0.540,94.646,87.831)
OP2: (2.840,94.443,88.958)
C2: (5.908,100.305,88.472)
C1': (3.531,100.227,87.890)
C3': (2.752,98.785,86.205)
O5': (2.026,96.649,88.086)
O4': (2.380,99.553,88.382)
C5': (1.029,97.634,87.754)
P: (1.609,95.234,88.689)
C4': (1.681,98.915,87.278)
C2': (3.509,100.089,86.366)
O2': (2.829,101.175,85.773)
N1: (4.731,99.574,88.439)
O4: (8.144,97.788,89.565)
O2: (5.970,101.480,88.154)
C6: (4.705,98.265,88.872)
C5: (5.795,97.622,89.288)
O3': (2.241,98.650,84.893)
N3: (7.008,99.610,88.897)
OP1: (0.540,94.646,87.831)
OP2: (2.840,94.443,88.958)
C2: (5.908,100.305,88.472)
C1': (3.531,100.227,87.890)
C3': (2.752,98.785,86.205)
O5': (2.026,96.649,88.086)
O4': (2.380,99.553,88.382)
C5': (1.029,97.634,87.754)
P: (1.609,95.234,88.689)
C4': (1.681,98.915,87.278)
C2': (3.509,100.089,86.366)
O2': (2.829,101.175,85.773)
N1: (4.731,99.574,88.439)
O4: (8.144,97.788,89.565)
O2: (5.970,101.480,88.154)
C6: (4.705,98.265,88.872)
C5: (5.795,97.622,89.288)
O3': (2.241,98.650,84.893)
OP1: (18.511,104.216,90.602)
OP2: (17.336,102.003,91.117)
C3': (14.342,105.424,89.082)
C1': (13.246,104.086,87.495)
C5': (16.674,104.607,88.365)
O4': (14.630,104.084,87.183)
C8: (13.836,101.934,88.711)
O2': (12.679,106.407,87.590)
C6: (10.797,100.292,89.295)
C5: (11.920,101.067,88.996)
C4: (11.700,102.267,88.352)
P: (17.801,103.007,90.132)
C4': (15.307,105.107,87.953)
C2': (12.992,105.291,88.396)
C2: (9.531,101.955,88.320)
N1: (9.591,100.773,88.935)
N3: (10.513,102.775,87.984)
N6: (10.857,99.113,89.916)
N7: (13.274,100.870,89.222)
N9: (12.943,102.820,88.160)
O5': (16.555,103.490,89.266)
O3': (14.545,106.725,89.610)
OP2: (17.336,102.003,91.117)
C3': (14.342,105.424,89.082)
C1': (13.246,104.086,87.495)
C5': (16.674,104.607,88.365)
O4': (14.630,104.084,87.183)
C8: (13.836,101.934,88.711)
O2': (12.679,106.407,87.590)
C6: (10.797,100.292,89.295)
C5: (11.920,101.067,88.996)
C4: (11.700,102.267,88.352)
P: (17.801,103.007,90.132)
C4': (15.307,105.107,87.953)
C2': (12.992,105.291,88.396)
C2: (9.531,101.955,88.320)
N1: (9.591,100.773,88.935)
N3: (10.513,102.775,87.984)
N6: (10.857,99.113,89.916)
N7: (13.274,100.870,89.222)
N9: (12.943,102.820,88.160)
O5': (16.555,103.490,89.266)
O3': (14.545,106.725,89.610)
Image (generated by PyMOL):