ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A741:A776

Extra

PDB:
ATOM 1 O3' G A 740 61.159 2.133 -9.695 1.00 55.31 O
ATOM 2 P U A 741 61.569 1.833 -11.208 1.00 64.02 P
ATOM 3 OP1 U A 741 61.844 0.373 -11.317 1.00 55.15 O
ATOM 4 OP2 U A 741 62.631 2.831 -11.551 1.00 63.79 O
ATOM 5 O5' U A 741 60.274 2.201 -12.058 1.00 58.17 O
ATOM 6 C5' U A 741 59.054 1.514 -11.856 1.00 59.05 C
ATOM 7 C4' U A 741 57.951 2.205 -12.595 1.00 56.99 C
ATOM 8 O4' U A 741 57.620 3.458 -11.944 1.00 64.47 O
ATOM 9 C3' U A 741 58.290 2.630 -14.007 1.00 61.46 C
ATOM 10 O3' U A 741 58.270 1.568 -14.943 1.00 63.87 O
ATOM 11 C2' U A 741 57.252 3.706 -14.281 1.00 64.81 C
ATOM 12 O2' U A 741 55.992 3.182 -14.626 1.00 71.18 O
ATOM 13 C1' U A 741 57.154 4.387 -12.915 1.00 66.30 C
ATOM 14 N1 U A 741 58.004 5.584 -12.921 1.00 56.16 N
ATOM 15 C2 U A 741 57.582 6.648 -13.687 1.00 61.11 C
ATOM 16 O2 U A 741 56.527 6.649 -14.296 1.00 62.91 O
ATOM 17 N3 U A 741 58.439 7.710 -13.719 1.00 67.68 N
ATOM 18 C4 U A 741 59.651 7.812 -13.081 1.00 62.24 C
ATOM 19 O4 U A 741 60.348 8.821 -13.249 1.00 58.59 O
ATOM 20 C5 U A 741 59.998 6.677 -12.291 1.00 62.36 C
ATOM 21 C6 U A 741 59.179 5.633 -12.233 1.00 58.07 C
ATOM 22 P G A 742 59.375 1.550 -16.114 1.00 72.21 P
ATOM 23 OP1 G A 742 59.222 0.288 -16.903 1.00 69.65 O
ATOM 24 OP2 G A 742 60.679 1.847 -15.462 1.00 76.72 O
ATOM 25 O5' G A 742 58.995 2.808 -17.028 1.00 70.52 O
TER

ATOM 1 O3' C B 775 57.019 19.442 -17.536 1.00 65.40 O
ATOM 2 P A B 776 56.268 19.330 -16.116 1.00 70.17 P
ATOM 3 OP1 A B 776 55.251 20.416 -15.992 1.00 62.60 O
ATOM 4 OP2 A B 776 57.328 19.193 -15.074 1.00 61.34 O
ATOM 5 O5' A B 776 55.516 17.927 -16.201 1.00 62.55 O
ATOM 6 C5' A B 776 54.395 17.746 -17.060 1.00 67.61 C
ATOM 7 C4' A B 776 53.790 16.382 -16.835 1.00 61.46 C
ATOM 8 O4' A B 776 54.618 15.349 -17.437 1.00 63.10 O
ATOM 9 C3' A B 776 53.694 15.973 -15.374 1.00 59.09 C
ATOM 10 O3' A B 776 52.561 16.515 -14.737 1.00 45.94 O
ATOM 11 C2' A B 776 53.645 14.457 -15.453 1.00 65.34 C
ATOM 12 O2' A B 776 52.351 13.975 -15.743 1.00 66.47 O
ATOM 13 C1' A B 776 54.592 14.184 -16.622 1.00 72.07 C
ATOM 14 N9 A B 776 55.949 13.917 -16.133 1.00 72.26 N
ATOM 15 C8 A B 776 57.025 14.768 -16.037 1.00 71.58 C
ATOM 16 N7 A B 776 58.098 14.210 -15.530 1.00 71.36 N
ATOM 17 C5 A B 776 57.708 12.906 -15.285 1.00 65.69 C
ATOM 18 C6 A B 776 58.384 11.806 -14.756 1.00 65.42 C
ATOM 19 N6 A B 776 59.659 11.821 -14.375 1.00 64.82 N
ATOM 20 N1 A B 776 57.698 10.660 -14.629 1.00 68.22 N
ATOM 21 C2 A B 776 56.417 10.628 -15.021 1.00 71.03 C
ATOM 22 N3 A B 776 55.674 11.589 -15.542 1.00 64.80 N
ATOM 23 C4 A B 776 56.387 12.714 -15.649 1.00 65.12 C
ATOM 24 P C B 777 52.586 16.714 -13.153 1.00 56.39 P
ATOM 25 OP1 C B 777 51.367 17.468 -12.748 1.00 60.44 O
ATOM 26 OP2 C B 777 53.925 17.234 -12.781 1.00 57.39 O
ATOM 27 O5' C B 777 52.504 15.233 -12.595 1.00 61.03 O
TER

Atoms:
C4: (59.651,7.812,-13.081)
N3: (58.439,7.710,-13.719)
OP1: (61.844,0.373,-11.317)
OP2: (62.631,2.831,-11.551)
C2: (57.582,6.648,-13.687)
C1': (57.154,4.387,-12.915)
C3': (58.290,2.630,-14.007)
O5': (60.274,2.201,-12.058)
O4': (57.620,3.458,-11.944)
C5': (59.054,1.514,-11.856)
P: (61.569,1.833,-11.208)
C4': (57.951,2.205,-12.595)
C2': (57.252,3.706,-14.281)
O2': (55.992,3.182,-14.626)
N1: (58.004,5.584,-12.921)
O4: (60.348,8.821,-13.249)
O2: (56.527,6.649,-14.296)
C6: (59.179,5.633,-12.233)
C5: (59.998,6.677,-12.291)
O3': (58.270,1.568,-14.943)
OP1: (55.251,20.416,-15.992)
OP2: (57.328,19.193,-15.074)
C3': (53.694,15.973,-15.374)
C1': (54.592,14.184,-16.622)
C5': (54.395,17.746,-17.060)
O4': (54.618,15.349,-17.437)
C8: (57.025,14.768,-16.037)
O2': (52.351,13.975,-15.743)
C6: (58.384,11.806,-14.756)
C5: (57.708,12.906,-15.285)
C4: (56.387,12.714,-15.649)
P: (56.268,19.330,-16.116)
C4': (53.790,16.382,-16.835)
C2': (53.645,14.457,-15.453)
C2: (56.417,10.628,-15.021)
N1: (57.698,10.660,-14.629)
N3: (55.674,11.589,-15.542)
N6: (59.659,11.821,-14.375)
N7: (58.098,14.210,-15.530)
N9: (55.949,13.917,-16.133)
O5': (55.516,17.927,-16.201)
O3': (52.561,16.515,-14.737)
Image (generated by PyMOL):
PyMOL image
show in jmol