ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0896:01255

Extra

PDB:
ATOM 1 O3' A A 895 21.956 97.715 78.247 1.00 35.95 O
ATOM 2 P U A 896 22.884 96.928 79.298 1.00 38.24 P
ATOM 3 OP1 U A 896 21.992 96.166 80.198 1.00 40.04 O
ATOM 4 OP2 U A 896 23.871 97.865 79.883 1.00 40.32 O
ATOM 5 O5' U A 896 23.662 95.886 78.383 1.00 36.48 O
ATOM 6 C5' U A 896 22.991 94.740 77.861 1.00 34.19 C
ATOM 7 C4' U A 896 23.984 93.769 77.278 1.00 34.13 C
ATOM 8 O4' U A 896 24.590 94.337 76.088 1.00 35.71 O
ATOM 9 C3' U A 896 25.181 93.407 78.137 1.00 34.56 C
ATOM 10 O3' U A 896 24.870 92.464 79.151 1.00 34.76 O
ATOM 11 C2' U A 896 26.138 92.854 77.090 1.00 34.62 C
ATOM 12 O2' U A 896 25.787 91.564 76.642 1.00 33.19 O
ATOM 13 C1' U A 896 25.914 93.839 75.944 1.00 34.32 C
ATOM 14 N1 U A 896 26.854 94.971 76.007 1.00 34.41 N
ATOM 15 C2 U A 896 28.153 94.763 75.556 1.00 33.20 C
ATOM 16 O2 U A 896 28.542 93.692 75.118 1.00 30.12 O
ATOM 17 N3 U A 896 28.978 95.857 75.648 1.00 33.31 N
ATOM 18 C4 U A 896 28.654 97.105 76.138 1.00 35.14 C
ATOM 19 O4 U A 896 29.515 97.982 76.173 1.00 38.61 O
ATOM 20 C5 U A 896 27.302 97.241 76.586 1.00 36.04 C
ATOM 21 C6 U A 896 26.468 96.200 76.506 1.00 34.90 C
ATOM 22 P C A 897 25.783 92.385 80.476 1.00 35.29 P
ATOM 23 OP1 C A 897 25.123 91.391 81.360 1.00 37.48 O
ATOM 24 OP2 C A 897 26.068 93.749 80.996 1.00 31.99 O
ATOM 25 O5' C A 897 27.158 91.779 79.961 1.00 29.39 O
TER

ATOM 1 O3' G B1254 40.112 98.202 73.002 1.00 26.74 O
ATOM 2 P A B1255 39.033 98.509 71.848 1.00 27.37 P
ATOM 3 OP1 A B1255 39.773 98.678 70.582 1.00 25.10 O
ATOM 4 OP2 A B1255 38.106 99.570 72.306 1.00 22.49 O
ATOM 5 O5' A B1255 38.222 97.145 71.710 1.00 29.58 O
ATOM 6 C5' A B1255 38.853 95.954 71.183 1.00 29.17 C
ATOM 7 C4' A B1255 37.863 94.814 71.148 1.00 29.43 C
ATOM 8 O4' A B1255 37.458 94.473 72.502 1.00 28.23 O
ATOM 9 C3' A B1255 36.556 95.136 70.443 1.00 28.94 C
ATOM 10 O3' A B1255 36.667 94.987 69.036 1.00 29.57 O
ATOM 11 C2' A B1255 35.599 94.137 71.070 1.00 28.61 C
ATOM 12 O2' A B1255 35.772 92.839 70.547 1.00 29.56 O
ATOM 13 C1' A B1255 36.076 94.151 72.523 1.00 29.11 C
ATOM 14 N9 A B1255 35.374 95.172 73.300 1.00 28.34 N
ATOM 15 C8 A B1255 35.785 96.450 73.581 1.00 29.11 C
ATOM 16 N7 A B1255 34.905 97.151 74.250 1.00 30.02 N
ATOM 17 C5 A B1255 33.850 96.272 74.435 1.00 28.85 C
ATOM 18 C6 A B1255 32.601 96.416 75.056 1.00 30.70 C
ATOM 19 N6 A B1255 32.183 97.542 75.627 1.00 30.00 N
ATOM 20 N1 A B1255 31.778 95.347 75.066 1.00 32.77 N
ATOM 21 C2 A B1255 32.196 94.215 74.487 1.00 31.31 C
ATOM 22 N3 A B1255 33.344 93.959 73.871 1.00 30.34 N
ATOM 23 C4 A B1255 34.134 95.044 73.874 1.00 28.45 C
ATOM 24 P U B1256 35.747 95.880 68.073 1.00 29.24 P
ATOM 25 OP1 U B1256 36.094 95.530 66.681 1.00 26.24 O
ATOM 26 OP2 U B1256 35.841 97.286 68.525 1.00 28.69 O
ATOM 27 O5' U B1256 34.266 95.382 68.380 1.00 31.67 O
TER

Atoms:
C4: (28.654,97.105,76.138)
N3: (28.978,95.857,75.648)
OP1: (21.992,96.166,80.198)
OP2: (23.871,97.865,79.883)
C2: (28.153,94.763,75.556)
C1': (25.914,93.839,75.944)
C3': (25.181,93.407,78.137)
O5': (23.662,95.886,78.383)
O4': (24.590,94.337,76.088)
C5': (22.991,94.740,77.861)
P: (22.884,96.928,79.298)
C4': (23.984,93.769,77.278)
C2': (26.138,92.854,77.090)
O2': (25.787,91.564,76.642)
N1: (26.854,94.971,76.007)
O4: (29.515,97.982,76.173)
O2: (28.542,93.692,75.118)
C6: (26.468,96.200,76.506)
C5: (27.302,97.241,76.586)
O3': (24.870,92.464,79.151)
OP1: (39.773,98.678,70.582)
OP2: (38.106,99.570,72.306)
C3': (36.556,95.136,70.443)
C1': (36.076,94.151,72.523)
C5': (38.853,95.954,71.183)
O4': (37.458,94.473,72.502)
C8: (35.785,96.450,73.581)
O2': (35.772,92.839,70.547)
C6: (32.601,96.416,75.056)
C5: (33.850,96.272,74.435)
C4: (34.134,95.044,73.874)
P: (39.033,98.509,71.848)
C4': (37.863,94.814,71.148)
C2': (35.599,94.137,71.070)
C2: (32.196,94.215,74.487)
N1: (31.778,95.347,75.066)
N3: (33.344,93.959,73.871)
N6: (32.183,97.542,75.627)
N7: (34.905,97.151,74.250)
N9: (35.374,95.172,73.300)
O5': (38.222,97.145,71.710)
O3': (36.667,94.987,69.036)
Image (generated by PyMOL):
PyMOL image
show in jmol