Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:A8:A19
Extra
PDB:
ATOM 1 O3' G A 7 30.959 -21.605 9.529 1.00 25.47 O
ATOM 2 P U A 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 3 OP1 U A 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 4 OP2 U A 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 5 O5' U A 8 29.519 -20.007 10.820 1.00 21.88 O
ATOM 6 C5' U A 8 29.297 -20.667 12.053 1.00 21.61 C
ATOM 7 C4' U A 8 29.104 -19.666 13.148 1.00 22.08 C
ATOM 8 O4' U A 8 30.340 -18.949 13.353 1.00 22.03 O
ATOM 9 C3' U A 8 28.083 -18.574 12.875 1.00 22.92 C
ATOM 10 O3' U A 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 11 C2' U A 8 28.522 -17.480 13.843 1.00 23.23 C
ATOM 12 O2' U A 8 28.072 -17.645 15.174 1.00 23.36 O
ATOM 13 C1' U A 8 30.048 -17.636 13.802 1.00 22.06 C
ATOM 14 N1 U A 8 30.663 -16.679 12.877 1.00 19.61 N
ATOM 15 C2 U A 8 31.086 -15.470 13.406 1.00 20.24 C
ATOM 16 O2 U A 8 31.054 -15.216 14.604 1.00 19.96 O
ATOM 17 N3 U A 8 31.551 -14.569 12.485 1.00 21.43 N
ATOM 18 C4 U A 8 31.649 -14.752 11.123 1.00 22.41 C
ATOM 19 O4 U A 8 31.952 -13.796 10.414 1.00 23.52 O
ATOM 20 C5 U A 8 31.249 -16.053 10.660 1.00 21.75 C
ATOM 21 C6 U A 8 30.782 -16.952 11.535 1.00 19.88 C
ATOM 22 P G A 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 23 OP1 G A 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 24 OP2 G A 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 25 O5' G A 9 25.403 -16.969 12.706 1.00 28.29 O
TER
ATOM 1 O3' C B 18 36.473 -4.460 12.137 1.00 23.31 O
ATOM 2 P A B 19 37.444 -5.515 12.869 1.00 27.20 P
ATOM 3 OP1 A B 19 38.551 -4.751 13.505 1.00 26.52 O
ATOM 4 OP2 A B 19 37.752 -6.609 11.904 1.00 24.34 O
ATOM 5 O5' A B 19 36.539 -6.101 14.042 1.00 27.72 O
ATOM 6 C5' A B 19 36.014 -5.234 15.044 1.00 27.20 C
ATOM 7 C4' A B 19 34.962 -5.946 15.853 1.00 26.89 C
ATOM 8 O4' A B 19 33.823 -6.262 15.015 1.00 26.14 O
ATOM 9 C3' A B 19 35.388 -7.286 16.428 1.00 27.11 C
ATOM 10 O3' A B 19 36.129 -7.094 17.624 1.00 27.99 O
ATOM 11 C2' A B 19 34.051 -7.975 16.646 1.00 26.51 C
ATOM 12 O2' A B 19 33.395 -7.504 17.809 1.00 28.01 O
ATOM 13 C1' A B 19 33.285 -7.513 15.402 1.00 24.43 C
ATOM 14 N9 A B 19 33.470 -8.416 14.278 1.00 21.10 N
ATOM 15 C8 A B 19 34.281 -8.224 13.197 1.00 21.86 C
ATOM 16 N7 A B 19 34.267 -9.217 12.345 1.00 22.73 N
ATOM 17 C5 A B 19 33.381 -10.121 12.905 1.00 20.74 C
ATOM 18 C6 A B 19 32.938 -11.387 12.495 1.00 20.31 C
ATOM 19 N6 A B 19 33.354 -11.993 11.386 1.00 18.03 N
ATOM 20 N1 A B 19 32.046 -12.023 13.279 1.00 21.70 N
ATOM 21 C2 A B 19 31.645 -11.422 14.405 1.00 23.23 C
ATOM 22 N3 A B 19 32.000 -10.239 14.902 1.00 22.95 N
ATOM 23 C4 A B 19 32.878 -9.634 14.093 1.00 21.18 C
ATOM 24 P C B 20 37.142 -8.231 18.125 1.00 26.21 P
ATOM 25 OP1 C B 20 38.162 -7.557 18.970 1.00 24.22 O
ATOM 26 OP2 C B 20 37.574 -9.050 16.964 1.00 22.95 O
ATOM 27 O5' C B 20 36.226 -9.142 19.054 1.00 25.09 O
TER
ATOM 2 P U A 8 29.546 -20.849 9.471 1.00 26.65 P
ATOM 3 OP1 U A 8 28.488 -21.885 9.554 1.00 28.43 O
ATOM 4 OP2 U A 8 29.572 -19.917 8.322 1.00 26.08 O
ATOM 5 O5' U A 8 29.519 -20.007 10.820 1.00 21.88 O
ATOM 6 C5' U A 8 29.297 -20.667 12.053 1.00 21.61 C
ATOM 7 C4' U A 8 29.104 -19.666 13.148 1.00 22.08 C
ATOM 8 O4' U A 8 30.340 -18.949 13.353 1.00 22.03 O
ATOM 9 C3' U A 8 28.083 -18.574 12.875 1.00 22.92 C
ATOM 10 O3' U A 8 26.753 -19.039 13.108 1.00 25.35 O
ATOM 11 C2' U A 8 28.522 -17.480 13.843 1.00 23.23 C
ATOM 12 O2' U A 8 28.072 -17.645 15.174 1.00 23.36 O
ATOM 13 C1' U A 8 30.048 -17.636 13.802 1.00 22.06 C
ATOM 14 N1 U A 8 30.663 -16.679 12.877 1.00 19.61 N
ATOM 15 C2 U A 8 31.086 -15.470 13.406 1.00 20.24 C
ATOM 16 O2 U A 8 31.054 -15.216 14.604 1.00 19.96 O
ATOM 17 N3 U A 8 31.551 -14.569 12.485 1.00 21.43 N
ATOM 18 C4 U A 8 31.649 -14.752 11.123 1.00 22.41 C
ATOM 19 O4 U A 8 31.952 -13.796 10.414 1.00 23.52 O
ATOM 20 C5 U A 8 31.249 -16.053 10.660 1.00 21.75 C
ATOM 21 C6 U A 8 30.782 -16.952 11.535 1.00 19.88 C
ATOM 22 P G A 9 25.537 -18.479 12.214 1.00 28.33 P
ATOM 23 OP1 G A 9 24.311 -19.211 12.615 1.00 27.98 O
ATOM 24 OP2 G A 9 25.945 -18.477 10.783 1.00 28.77 O
ATOM 25 O5' G A 9 25.403 -16.969 12.706 1.00 28.29 O
TER
ATOM 1 O3' C B 18 36.473 -4.460 12.137 1.00 23.31 O
ATOM 2 P A B 19 37.444 -5.515 12.869 1.00 27.20 P
ATOM 3 OP1 A B 19 38.551 -4.751 13.505 1.00 26.52 O
ATOM 4 OP2 A B 19 37.752 -6.609 11.904 1.00 24.34 O
ATOM 5 O5' A B 19 36.539 -6.101 14.042 1.00 27.72 O
ATOM 6 C5' A B 19 36.014 -5.234 15.044 1.00 27.20 C
ATOM 7 C4' A B 19 34.962 -5.946 15.853 1.00 26.89 C
ATOM 8 O4' A B 19 33.823 -6.262 15.015 1.00 26.14 O
ATOM 9 C3' A B 19 35.388 -7.286 16.428 1.00 27.11 C
ATOM 10 O3' A B 19 36.129 -7.094 17.624 1.00 27.99 O
ATOM 11 C2' A B 19 34.051 -7.975 16.646 1.00 26.51 C
ATOM 12 O2' A B 19 33.395 -7.504 17.809 1.00 28.01 O
ATOM 13 C1' A B 19 33.285 -7.513 15.402 1.00 24.43 C
ATOM 14 N9 A B 19 33.470 -8.416 14.278 1.00 21.10 N
ATOM 15 C8 A B 19 34.281 -8.224 13.197 1.00 21.86 C
ATOM 16 N7 A B 19 34.267 -9.217 12.345 1.00 22.73 N
ATOM 17 C5 A B 19 33.381 -10.121 12.905 1.00 20.74 C
ATOM 18 C6 A B 19 32.938 -11.387 12.495 1.00 20.31 C
ATOM 19 N6 A B 19 33.354 -11.993 11.386 1.00 18.03 N
ATOM 20 N1 A B 19 32.046 -12.023 13.279 1.00 21.70 N
ATOM 21 C2 A B 19 31.645 -11.422 14.405 1.00 23.23 C
ATOM 22 N3 A B 19 32.000 -10.239 14.902 1.00 22.95 N
ATOM 23 C4 A B 19 32.878 -9.634 14.093 1.00 21.18 C
ATOM 24 P C B 20 37.142 -8.231 18.125 1.00 26.21 P
ATOM 25 OP1 C B 20 38.162 -7.557 18.970 1.00 24.22 O
ATOM 26 OP2 C B 20 37.574 -9.050 16.964 1.00 22.95 O
ATOM 27 O5' C B 20 36.226 -9.142 19.054 1.00 25.09 O
TER
Atoms:
C4: (31.649,-14.752,11.123)
N3: (31.551,-14.569,12.485)
OP1: (28.488,-21.885,9.554)
OP2: (29.572,-19.917,8.322)
C2: (31.086,-15.470,13.406)
C1': (30.048,-17.636,13.802)
C3': (28.083,-18.574,12.875)
O5': (29.519,-20.007,10.820)
O4': (30.340,-18.949,13.353)
C5': (29.297,-20.667,12.053)
P: (29.546,-20.849,9.471)
C4': (29.104,-19.666,13.148)
C2': (28.522,-17.480,13.843)
O2': (28.072,-17.645,15.174)
N1: (30.663,-16.679,12.877)
O4: (31.952,-13.796,10.414)
O2: (31.054,-15.216,14.604)
C6: (30.782,-16.952,11.535)
C5: (31.249,-16.053,10.660)
O3': (26.753,-19.039,13.108)
N3: (31.551,-14.569,12.485)
OP1: (28.488,-21.885,9.554)
OP2: (29.572,-19.917,8.322)
C2: (31.086,-15.470,13.406)
C1': (30.048,-17.636,13.802)
C3': (28.083,-18.574,12.875)
O5': (29.519,-20.007,10.820)
O4': (30.340,-18.949,13.353)
C5': (29.297,-20.667,12.053)
P: (29.546,-20.849,9.471)
C4': (29.104,-19.666,13.148)
C2': (28.522,-17.480,13.843)
O2': (28.072,-17.645,15.174)
N1: (30.663,-16.679,12.877)
O4: (31.952,-13.796,10.414)
O2: (31.054,-15.216,14.604)
C6: (30.782,-16.952,11.535)
C5: (31.249,-16.053,10.660)
O3': (26.753,-19.039,13.108)
OP1: (38.551,-4.751,13.505)
OP2: (37.752,-6.609,11.904)
C3': (35.388,-7.286,16.428)
C1': (33.285,-7.513,15.402)
C5': (36.014,-5.234,15.044)
O4': (33.823,-6.262,15.015)
C8: (34.281,-8.224,13.197)
O2': (33.395,-7.504,17.809)
C6: (32.938,-11.387,12.495)
C5: (33.381,-10.121,12.905)
C4: (32.878,-9.634,14.093)
P: (37.444,-5.515,12.869)
C4': (34.962,-5.946,15.853)
C2': (34.051,-7.975,16.646)
C2: (31.645,-11.422,14.405)
N1: (32.046,-12.023,13.279)
N3: (32.000,-10.239,14.902)
N6: (33.354,-11.993,11.386)
N7: (34.267,-9.217,12.345)
N9: (33.470,-8.416,14.278)
O5': (36.539,-6.101,14.042)
O3': (36.129,-7.094,17.624)
OP2: (37.752,-6.609,11.904)
C3': (35.388,-7.286,16.428)
C1': (33.285,-7.513,15.402)
C5': (36.014,-5.234,15.044)
O4': (33.823,-6.262,15.015)
C8: (34.281,-8.224,13.197)
O2': (33.395,-7.504,17.809)
C6: (32.938,-11.387,12.495)
C5: (33.381,-10.121,12.905)
C4: (32.878,-9.634,14.093)
P: (37.444,-5.515,12.869)
C4': (34.962,-5.946,15.853)
C2': (34.051,-7.975,16.646)
C2: (31.645,-11.422,14.405)
N1: (32.046,-12.023,13.279)
N3: (32.000,-10.239,14.902)
N6: (33.354,-11.993,11.386)
N7: (34.267,-9.217,12.345)
N9: (33.470,-8.416,14.278)
O5': (36.539,-6.101,14.042)
O3': (36.129,-7.094,17.624)
Image (generated by PyMOL):