Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0300:0307
Extra
PDB:
ATOM 1 O3' C A 299 -5.997 144.915 43.487 1.00 56.15 O
ATOM 2 P U A 300 -5.093 145.721 44.535 1.00 57.81 P
ATOM 3 OP1 U A 300 -5.956 146.625 45.341 1.00 57.10 O
ATOM 4 OP2 U A 300 -3.945 146.289 43.763 1.00 56.86 O
ATOM 5 O5' U A 300 -4.547 144.571 45.496 1.00 57.24 O
ATOM 6 C5' U A 300 -5.446 143.836 46.357 1.00 55.54 C
ATOM 7 C4' U A 300 -4.674 142.860 47.217 1.00 54.55 C
ATOM 8 O4' U A 300 -4.116 141.813 46.381 1.00 54.05 O
ATOM 9 C3' U A 300 -3.476 143.440 47.954 1.00 54.02 C
ATOM 10 O3' U A 300 -3.874 144.080 49.166 1.00 55.07 O
ATOM 11 C2' U A 300 -2.615 142.205 48.178 1.00 52.98 C
ATOM 12 O2' U A 300 -3.108 141.415 49.238 1.00 53.74 O
ATOM 13 C1' U A 300 -2.833 141.445 46.865 1.00 51.85 C
ATOM 14 N1 U A 300 -1.846 141.748 45.813 1.00 48.99 N
ATOM 15 C2 U A 300 -0.725 140.937 45.704 1.00 48.89 C
ATOM 16 O2 U A 300 -0.511 139.980 46.430 1.00 49.80 O
ATOM 17 N3 U A 300 0.144 141.288 44.705 1.00 49.05 N
ATOM 18 C4 U A 300 0.020 142.340 43.828 1.00 48.05 C
ATOM 19 O4 U A 300 0.899 142.533 42.989 1.00 47.32 O
ATOM 20 C5 U A 300 -1.159 143.122 43.997 1.00 48.20 C
ATOM 21 C6 U A 300 -2.029 142.808 44.960 1.00 48.64 C
ATOM 22 P U A 301 -2.949 145.235 49.807 1.00 57.18 P
ATOM 23 OP1 U A 301 -3.652 145.771 51.012 1.00 55.02 O
ATOM 24 OP2 U A 301 -2.509 146.175 48.735 1.00 54.83 O
ATOM 25 O5' U A 301 -1.653 144.437 50.285 1.00 56.84 O
TER
ATOM 1 O3' C B 306 10.073 136.737 41.837 1.00 50.12 O
ATOM 2 P A B 307 8.810 135.740 41.830 1.00 52.75 P
ATOM 3 OP1 A B 307 9.349 134.373 41.573 1.00 51.71 O
ATOM 4 OP2 A B 307 7.741 136.294 40.929 1.00 53.46 O
ATOM 5 O5' A B 307 8.254 135.801 43.323 1.00 49.64 O
ATOM 6 C5' A B 307 8.847 135.033 44.387 1.00 46.01 C
ATOM 7 C4' A B 307 7.911 135.012 45.567 1.00 46.28 C
ATOM 8 O4' A B 307 7.684 136.372 46.018 1.00 45.68 O
ATOM 9 C3' A B 307 6.528 134.484 45.229 1.00 47.72 C
ATOM 10 O3' A B 307 6.514 133.070 45.343 1.00 50.26 O
ATOM 11 C2' A B 307 5.639 135.189 46.243 1.00 47.66 C
ATOM 12 O2' A B 307 5.689 134.594 47.527 1.00 48.13 O
ATOM 13 C1' A B 307 6.310 136.563 46.314 1.00 46.58 C
ATOM 14 N9 A B 307 5.782 137.551 45.371 1.00 46.49 N
ATOM 15 C8 A B 307 6.365 137.987 44.204 1.00 46.30 C
ATOM 16 N7 A B 307 5.675 138.910 43.579 1.00 46.89 N
ATOM 17 C5 A B 307 4.555 139.088 44.379 1.00 47.14 C
ATOM 18 C6 A B 307 3.434 139.936 44.266 1.00 47.52 C
ATOM 19 N6 A B 307 3.249 140.802 43.263 1.00 47.15 N
ATOM 20 N1 A B 307 2.496 139.865 45.235 1.00 48.00 N
ATOM 21 C2 A B 307 2.681 139.001 46.244 1.00 47.87 C
ATOM 22 N3 A B 307 3.689 138.157 46.461 1.00 47.47 N
ATOM 23 C4 A B 307 4.604 138.251 45.482 1.00 46.93 C
ATOM 24 P G B 308 5.536 132.207 44.413 1.00 52.14 P
ATOM 25 OP1 G B 308 5.802 130.763 44.672 1.00 51.57 O
ATOM 26 OP2 G B 308 5.618 132.725 43.028 1.00 52.25 O
ATOM 27 O5' G B 308 4.106 132.560 45.006 1.00 52.50 O
TER
ATOM 2 P U A 300 -5.093 145.721 44.535 1.00 57.81 P
ATOM 3 OP1 U A 300 -5.956 146.625 45.341 1.00 57.10 O
ATOM 4 OP2 U A 300 -3.945 146.289 43.763 1.00 56.86 O
ATOM 5 O5' U A 300 -4.547 144.571 45.496 1.00 57.24 O
ATOM 6 C5' U A 300 -5.446 143.836 46.357 1.00 55.54 C
ATOM 7 C4' U A 300 -4.674 142.860 47.217 1.00 54.55 C
ATOM 8 O4' U A 300 -4.116 141.813 46.381 1.00 54.05 O
ATOM 9 C3' U A 300 -3.476 143.440 47.954 1.00 54.02 C
ATOM 10 O3' U A 300 -3.874 144.080 49.166 1.00 55.07 O
ATOM 11 C2' U A 300 -2.615 142.205 48.178 1.00 52.98 C
ATOM 12 O2' U A 300 -3.108 141.415 49.238 1.00 53.74 O
ATOM 13 C1' U A 300 -2.833 141.445 46.865 1.00 51.85 C
ATOM 14 N1 U A 300 -1.846 141.748 45.813 1.00 48.99 N
ATOM 15 C2 U A 300 -0.725 140.937 45.704 1.00 48.89 C
ATOM 16 O2 U A 300 -0.511 139.980 46.430 1.00 49.80 O
ATOM 17 N3 U A 300 0.144 141.288 44.705 1.00 49.05 N
ATOM 18 C4 U A 300 0.020 142.340 43.828 1.00 48.05 C
ATOM 19 O4 U A 300 0.899 142.533 42.989 1.00 47.32 O
ATOM 20 C5 U A 300 -1.159 143.122 43.997 1.00 48.20 C
ATOM 21 C6 U A 300 -2.029 142.808 44.960 1.00 48.64 C
ATOM 22 P U A 301 -2.949 145.235 49.807 1.00 57.18 P
ATOM 23 OP1 U A 301 -3.652 145.771 51.012 1.00 55.02 O
ATOM 24 OP2 U A 301 -2.509 146.175 48.735 1.00 54.83 O
ATOM 25 O5' U A 301 -1.653 144.437 50.285 1.00 56.84 O
TER
ATOM 1 O3' C B 306 10.073 136.737 41.837 1.00 50.12 O
ATOM 2 P A B 307 8.810 135.740 41.830 1.00 52.75 P
ATOM 3 OP1 A B 307 9.349 134.373 41.573 1.00 51.71 O
ATOM 4 OP2 A B 307 7.741 136.294 40.929 1.00 53.46 O
ATOM 5 O5' A B 307 8.254 135.801 43.323 1.00 49.64 O
ATOM 6 C5' A B 307 8.847 135.033 44.387 1.00 46.01 C
ATOM 7 C4' A B 307 7.911 135.012 45.567 1.00 46.28 C
ATOM 8 O4' A B 307 7.684 136.372 46.018 1.00 45.68 O
ATOM 9 C3' A B 307 6.528 134.484 45.229 1.00 47.72 C
ATOM 10 O3' A B 307 6.514 133.070 45.343 1.00 50.26 O
ATOM 11 C2' A B 307 5.639 135.189 46.243 1.00 47.66 C
ATOM 12 O2' A B 307 5.689 134.594 47.527 1.00 48.13 O
ATOM 13 C1' A B 307 6.310 136.563 46.314 1.00 46.58 C
ATOM 14 N9 A B 307 5.782 137.551 45.371 1.00 46.49 N
ATOM 15 C8 A B 307 6.365 137.987 44.204 1.00 46.30 C
ATOM 16 N7 A B 307 5.675 138.910 43.579 1.00 46.89 N
ATOM 17 C5 A B 307 4.555 139.088 44.379 1.00 47.14 C
ATOM 18 C6 A B 307 3.434 139.936 44.266 1.00 47.52 C
ATOM 19 N6 A B 307 3.249 140.802 43.263 1.00 47.15 N
ATOM 20 N1 A B 307 2.496 139.865 45.235 1.00 48.00 N
ATOM 21 C2 A B 307 2.681 139.001 46.244 1.00 47.87 C
ATOM 22 N3 A B 307 3.689 138.157 46.461 1.00 47.47 N
ATOM 23 C4 A B 307 4.604 138.251 45.482 1.00 46.93 C
ATOM 24 P G B 308 5.536 132.207 44.413 1.00 52.14 P
ATOM 25 OP1 G B 308 5.802 130.763 44.672 1.00 51.57 O
ATOM 26 OP2 G B 308 5.618 132.725 43.028 1.00 52.25 O
ATOM 27 O5' G B 308 4.106 132.560 45.006 1.00 52.50 O
TER
Atoms:
C4: (0.020,142.340,43.828)
N3: (0.144,141.288,44.705)
OP1: (-5.956,146.625,45.341)
OP2: (-3.945,146.289,43.763)
C2: (-0.725,140.937,45.704)
C1': (-2.833,141.445,46.865)
C3': (-3.476,143.440,47.954)
O5': (-4.547,144.571,45.496)
O4': (-4.116,141.813,46.381)
C5': (-5.446,143.836,46.357)
P: (-5.093,145.721,44.535)
C4': (-4.674,142.860,47.217)
C2': (-2.615,142.205,48.178)
O2': (-3.108,141.415,49.238)
N1: (-1.846,141.748,45.813)
O4: (0.899,142.533,42.989)
O2: (-0.511,139.980,46.430)
C6: (-2.029,142.808,44.960)
C5: (-1.159,143.122,43.997)
O3': (-3.874,144.080,49.166)
N3: (0.144,141.288,44.705)
OP1: (-5.956,146.625,45.341)
OP2: (-3.945,146.289,43.763)
C2: (-0.725,140.937,45.704)
C1': (-2.833,141.445,46.865)
C3': (-3.476,143.440,47.954)
O5': (-4.547,144.571,45.496)
O4': (-4.116,141.813,46.381)
C5': (-5.446,143.836,46.357)
P: (-5.093,145.721,44.535)
C4': (-4.674,142.860,47.217)
C2': (-2.615,142.205,48.178)
O2': (-3.108,141.415,49.238)
N1: (-1.846,141.748,45.813)
O4: (0.899,142.533,42.989)
O2: (-0.511,139.980,46.430)
C6: (-2.029,142.808,44.960)
C5: (-1.159,143.122,43.997)
O3': (-3.874,144.080,49.166)
OP1: (9.349,134.373,41.573)
OP2: (7.741,136.294,40.929)
C3': (6.528,134.484,45.229)
C1': (6.310,136.563,46.314)
C5': (8.847,135.033,44.387)
O4': (7.684,136.372,46.018)
C8: (6.365,137.987,44.204)
O2': (5.689,134.594,47.527)
C6: (3.434,139.936,44.266)
C5: (4.555,139.088,44.379)
C4: (4.604,138.251,45.482)
P: (8.810,135.740,41.830)
C4': (7.911,135.012,45.567)
C2': (5.639,135.189,46.243)
C2: (2.681,139.001,46.244)
N1: (2.496,139.865,45.235)
N3: (3.689,138.157,46.461)
N6: (3.249,140.802,43.263)
N7: (5.675,138.910,43.579)
N9: (5.782,137.551,45.371)
O5': (8.254,135.801,43.323)
O3': (6.514,133.070,45.343)
OP2: (7.741,136.294,40.929)
C3': (6.528,134.484,45.229)
C1': (6.310,136.563,46.314)
C5': (8.847,135.033,44.387)
O4': (7.684,136.372,46.018)
C8: (6.365,137.987,44.204)
O2': (5.689,134.594,47.527)
C6: (3.434,139.936,44.266)
C5: (4.555,139.088,44.379)
C4: (4.604,138.251,45.482)
P: (8.810,135.740,41.830)
C4': (7.911,135.012,45.567)
C2': (5.639,135.189,46.243)
C2: (2.681,139.001,46.244)
N1: (2.496,139.865,45.235)
N3: (3.689,138.157,46.461)
N6: (3.249,140.802,43.263)
N7: (5.675,138.910,43.579)
N9: (5.782,137.551,45.371)
O5': (8.254,135.801,43.323)
O3': (6.514,133.070,45.343)
Image (generated by PyMOL):