Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:B3:A9
Extra
PDB:
ATOM 1 O3' G A 2 23.279 12.784 65.834 1.00113.57 O
ATOM 2 P U A 3 24.193 13.919 65.147 1.00115.53 P
ATOM 3 OP1 U A 3 23.266 15.028 64.808 1.00115.84 O
ATOM 4 OP2 U A 3 25.011 13.288 64.068 1.00113.26 O
ATOM 5 O5' U A 3 25.163 14.389 66.328 1.00113.00 O
ATOM 6 C5' U A 3 24.634 14.929 67.541 1.00109.88 C
ATOM 7 C4' U A 3 25.726 15.109 68.575 1.00108.51 C
ATOM 8 O4' U A 3 26.230 13.799 68.956 1.00106.40 O
ATOM 9 C3' U A 3 26.981 15.859 68.143 1.00108.69 C
ATOM 10 O3' U A 3 26.880 17.273 68.136 1.00109.77 O
ATOM 11 C2' U A 3 28.011 15.352 69.138 1.00106.75 C
ATOM 12 O2' U A 3 27.849 15.929 70.417 1.00104.50 O
ATOM 13 C1' U A 3 27.633 13.876 69.206 1.00104.28 C
ATOM 14 N1 U A 3 28.348 13.105 68.170 1.00101.93 N
ATOM 15 C2 U A 3 29.666 12.742 68.421 1.00100.83 C
ATOM 16 O2 U A 3 30.247 13.018 69.461 1.00 99.15 O
ATOM 17 N3 U A 3 30.278 12.048 67.403 1.00 98.91 N
ATOM 18 C4 U A 3 29.728 11.690 66.185 1.00 99.10 C
ATOM 19 O4 U A 3 30.435 11.143 65.337 1.00 97.22 O
ATOM 20 C5 U A 3 28.369 12.083 66.006 1.00 99.68 C
ATOM 21 C6 U A 3 27.738 12.759 66.977 1.00101.22 C
ATOM 22 P G A 4 27.781 18.119 67.098 1.00108.22 P
ATOM 23 OP1 G A 4 27.339 19.529 67.235 1.00110.54 O
ATOM 24 OP2 G A 4 27.761 17.460 65.757 1.00106.01 O
ATOM 25 O5' G A 4 29.271 18.003 67.647 1.00102.71 O
TER
ATOM 1 O3' C B 8 41.451 7.658 67.452 1.00 97.52 O
ATOM 2 P A B 9 40.500 6.838 68.471 1.00100.07 P
ATOM 3 OP1 A B 9 41.427 6.196 69.434 1.00100.97 O
ATOM 4 OP2 A B 9 39.509 6.002 67.739 1.00 97.89 O
ATOM 5 O5' A B 9 39.703 7.969 69.257 1.00 99.18 O
ATOM 6 C5' A B 9 40.370 8.816 70.193 1.00 98.89 C
ATOM 7 C4' A B 9 39.374 9.729 70.873 1.00100.38 C
ATOM 8 O4' A B 9 38.822 10.655 69.898 1.00 99.24 O
ATOM 9 C3' A B 9 38.154 9.046 71.473 1.00102.59 C
ATOM 10 O3' A B 9 38.417 8.502 72.766 1.00105.83 O
ATOM 11 C2' A B 9 37.125 10.176 71.495 1.00101.22 C
ATOM 12 O2' A B 9 37.256 11.064 72.592 1.00104.38 O
ATOM 13 C1' A B 9 37.449 10.894 70.184 1.00 97.24 C
ATOM 14 N9 A B 9 36.653 10.386 69.069 1.00 92.90 N
ATOM 15 C8 A B 9 37.025 9.494 68.083 1.00 92.41 C
ATOM 16 N7 A B 9 36.079 9.240 67.215 1.00 89.92 N
ATOM 17 C5 A B 9 35.009 10.012 67.657 1.00 90.13 C
ATOM 18 C6 A B 9 33.697 10.195 67.159 1.00 88.93 C
ATOM 19 N6 A B 9 33.220 9.584 66.064 1.00 86.21 N
ATOM 20 N1 A B 9 32.884 11.040 67.838 1.00 88.92 N
ATOM 21 C2 A B 9 33.363 11.655 68.940 1.00 89.53 C
ATOM 22 N3 A B 9 34.570 11.566 69.500 1.00 90.06 N
ATOM 23 C4 A B 9 35.352 10.722 68.801 1.00 90.71 C
ATOM 24 P C B 10 37.643 7.172 73.237 1.00108.49 P
ATOM 25 OP1 C B 10 38.426 6.615 74.356 1.00107.51 O
ATOM 26 OP2 C B 10 37.376 6.339 72.032 1.00106.70 O
ATOM 27 O5' C B 10 36.245 7.706 73.784 1.00107.25 O
TER
ATOM 2 P U A 3 24.193 13.919 65.147 1.00115.53 P
ATOM 3 OP1 U A 3 23.266 15.028 64.808 1.00115.84 O
ATOM 4 OP2 U A 3 25.011 13.288 64.068 1.00113.26 O
ATOM 5 O5' U A 3 25.163 14.389 66.328 1.00113.00 O
ATOM 6 C5' U A 3 24.634 14.929 67.541 1.00109.88 C
ATOM 7 C4' U A 3 25.726 15.109 68.575 1.00108.51 C
ATOM 8 O4' U A 3 26.230 13.799 68.956 1.00106.40 O
ATOM 9 C3' U A 3 26.981 15.859 68.143 1.00108.69 C
ATOM 10 O3' U A 3 26.880 17.273 68.136 1.00109.77 O
ATOM 11 C2' U A 3 28.011 15.352 69.138 1.00106.75 C
ATOM 12 O2' U A 3 27.849 15.929 70.417 1.00104.50 O
ATOM 13 C1' U A 3 27.633 13.876 69.206 1.00104.28 C
ATOM 14 N1 U A 3 28.348 13.105 68.170 1.00101.93 N
ATOM 15 C2 U A 3 29.666 12.742 68.421 1.00100.83 C
ATOM 16 O2 U A 3 30.247 13.018 69.461 1.00 99.15 O
ATOM 17 N3 U A 3 30.278 12.048 67.403 1.00 98.91 N
ATOM 18 C4 U A 3 29.728 11.690 66.185 1.00 99.10 C
ATOM 19 O4 U A 3 30.435 11.143 65.337 1.00 97.22 O
ATOM 20 C5 U A 3 28.369 12.083 66.006 1.00 99.68 C
ATOM 21 C6 U A 3 27.738 12.759 66.977 1.00101.22 C
ATOM 22 P G A 4 27.781 18.119 67.098 1.00108.22 P
ATOM 23 OP1 G A 4 27.339 19.529 67.235 1.00110.54 O
ATOM 24 OP2 G A 4 27.761 17.460 65.757 1.00106.01 O
ATOM 25 O5' G A 4 29.271 18.003 67.647 1.00102.71 O
TER
ATOM 1 O3' C B 8 41.451 7.658 67.452 1.00 97.52 O
ATOM 2 P A B 9 40.500 6.838 68.471 1.00100.07 P
ATOM 3 OP1 A B 9 41.427 6.196 69.434 1.00100.97 O
ATOM 4 OP2 A B 9 39.509 6.002 67.739 1.00 97.89 O
ATOM 5 O5' A B 9 39.703 7.969 69.257 1.00 99.18 O
ATOM 6 C5' A B 9 40.370 8.816 70.193 1.00 98.89 C
ATOM 7 C4' A B 9 39.374 9.729 70.873 1.00100.38 C
ATOM 8 O4' A B 9 38.822 10.655 69.898 1.00 99.24 O
ATOM 9 C3' A B 9 38.154 9.046 71.473 1.00102.59 C
ATOM 10 O3' A B 9 38.417 8.502 72.766 1.00105.83 O
ATOM 11 C2' A B 9 37.125 10.176 71.495 1.00101.22 C
ATOM 12 O2' A B 9 37.256 11.064 72.592 1.00104.38 O
ATOM 13 C1' A B 9 37.449 10.894 70.184 1.00 97.24 C
ATOM 14 N9 A B 9 36.653 10.386 69.069 1.00 92.90 N
ATOM 15 C8 A B 9 37.025 9.494 68.083 1.00 92.41 C
ATOM 16 N7 A B 9 36.079 9.240 67.215 1.00 89.92 N
ATOM 17 C5 A B 9 35.009 10.012 67.657 1.00 90.13 C
ATOM 18 C6 A B 9 33.697 10.195 67.159 1.00 88.93 C
ATOM 19 N6 A B 9 33.220 9.584 66.064 1.00 86.21 N
ATOM 20 N1 A B 9 32.884 11.040 67.838 1.00 88.92 N
ATOM 21 C2 A B 9 33.363 11.655 68.940 1.00 89.53 C
ATOM 22 N3 A B 9 34.570 11.566 69.500 1.00 90.06 N
ATOM 23 C4 A B 9 35.352 10.722 68.801 1.00 90.71 C
ATOM 24 P C B 10 37.643 7.172 73.237 1.00108.49 P
ATOM 25 OP1 C B 10 38.426 6.615 74.356 1.00107.51 O
ATOM 26 OP2 C B 10 37.376 6.339 72.032 1.00106.70 O
ATOM 27 O5' C B 10 36.245 7.706 73.784 1.00107.25 O
TER
Atoms:
C4: (29.728,11.690,66.185)
N3: (30.278,12.048,67.403)
OP1: (23.266,15.028,64.808)
OP2: (25.011,13.288,64.068)
C2: (29.666,12.742,68.421)
C1': (27.633,13.876,69.206)
C3': (26.981,15.859,68.143)
O5': (25.163,14.389,66.328)
O4': (26.230,13.799,68.956)
C5': (24.634,14.929,67.541)
P: (24.193,13.919,65.147)
C4': (25.726,15.109,68.575)
C2': (28.011,15.352,69.138)
O2': (27.849,15.929,70.417)
N1: (28.348,13.105,68.170)
O4: (30.435,11.143,65.337)
O2: (30.247,13.018,69.461)
C6: (27.738,12.759,66.977)
C5: (28.369,12.083,66.006)
O3': (26.880,17.273,68.136)
N3: (30.278,12.048,67.403)
OP1: (23.266,15.028,64.808)
OP2: (25.011,13.288,64.068)
C2: (29.666,12.742,68.421)
C1': (27.633,13.876,69.206)
C3': (26.981,15.859,68.143)
O5': (25.163,14.389,66.328)
O4': (26.230,13.799,68.956)
C5': (24.634,14.929,67.541)
P: (24.193,13.919,65.147)
C4': (25.726,15.109,68.575)
C2': (28.011,15.352,69.138)
O2': (27.849,15.929,70.417)
N1: (28.348,13.105,68.170)
O4: (30.435,11.143,65.337)
O2: (30.247,13.018,69.461)
C6: (27.738,12.759,66.977)
C5: (28.369,12.083,66.006)
O3': (26.880,17.273,68.136)
OP1: (41.427,6.196,69.434)
OP2: (39.509,6.002,67.739)
C3': (38.154,9.046,71.473)
C1': (37.449,10.894,70.184)
C5': (40.370,8.816,70.193)
O4': (38.822,10.655,69.898)
C8: (37.025,9.494,68.083)
O2': (37.256,11.064,72.592)
C6: (33.697,10.195,67.159)
C5: (35.009,10.012,67.657)
C4: (35.352,10.722,68.801)
P: (40.500,6.838,68.471)
C4': (39.374,9.729,70.873)
C2': (37.125,10.176,71.495)
C2: (33.363,11.655,68.940)
N1: (32.884,11.040,67.838)
N3: (34.570,11.566,69.500)
N6: (33.220,9.584,66.064)
N7: (36.079,9.240,67.215)
N9: (36.653,10.386,69.069)
O5': (39.703,7.969,69.257)
O3': (38.417,8.502,72.766)
OP2: (39.509,6.002,67.739)
C3': (38.154,9.046,71.473)
C1': (37.449,10.894,70.184)
C5': (40.370,8.816,70.193)
O4': (38.822,10.655,69.898)
C8: (37.025,9.494,68.083)
O2': (37.256,11.064,72.592)
C6: (33.697,10.195,67.159)
C5: (35.009,10.012,67.657)
C4: (35.352,10.722,68.801)
P: (40.500,6.838,68.471)
C4': (39.374,9.729,70.873)
C2': (37.125,10.176,71.495)
C2: (33.363,11.655,68.940)
N1: (32.884,11.040,67.838)
N3: (34.570,11.566,69.500)
N6: (33.220,9.584,66.064)
N7: (36.079,9.240,67.215)
N9: (36.653,10.386,69.069)
O5': (39.703,7.969,69.257)
O3': (38.417,8.502,72.766)
Image (generated by PyMOL):