Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A2022:A2006
Extra
PDB:
ATOM 1 O3' G A2021 40.629 124.521 107.683 1.00 37.71 O
ATOM 2 P U A2022 40.469 123.052 107.076 1.00 39.34 P
ATOM 3 OP1 U A2022 40.045 122.215 108.203 1.00 39.15 O
ATOM 4 OP2 U A2022 41.673 122.679 106.300 1.00 38.38 O
ATOM 5 O5' U A2022 39.281 123.184 106.025 1.00 39.17 O
ATOM 6 C5' U A2022 38.022 123.739 106.409 1.00 38.57 C
ATOM 7 C4' U A2022 37.005 123.524 105.330 1.00 37.86 C
ATOM 8 O4' U A2022 37.307 124.370 104.203 1.00 37.73 O
ATOM 9 C3' U A2022 36.913 122.099 104.807 1.00 38.43 C
ATOM 10 O3' U A2022 35.564 121.839 104.507 1.00 36.65 O
ATOM 11 C2' U A2022 37.672 122.154 103.488 1.00 38.17 C
ATOM 12 O2' U A2022 37.211 121.229 102.515 1.00 39.26 O
ATOM 13 C1' U A2022 37.395 123.585 103.039 1.00 37.48 C
ATOM 14 N1 U A2022 38.483 124.098 102.205 1.00 37.96 N
ATOM 15 C2 U A2022 38.198 124.416 100.892 1.00 36.45 C
ATOM 16 O2 U A2022 37.077 124.365 100.427 1.00 34.55 O
ATOM 17 N3 U A2022 39.284 124.796 100.148 1.00 34.73 N
ATOM 18 C4 U A2022 40.589 124.898 100.582 1.00 35.42 C
ATOM 19 O4 U A2022 41.477 125.113 99.764 1.00 36.60 O
ATOM 20 C5 U A2022 40.786 124.601 101.963 1.00 36.11 C
ATOM 21 C6 U A2022 39.755 124.222 102.706 1.00 38.00 C
ATOM 22 P C A2023 34.692 120.911 105.469 1.00 35.84 P
ATOM 23 OP1 C A2023 33.378 120.914 104.815 1.00 35.59 O
ATOM 24 OP2 C A2023 34.802 121.333 106.880 1.00 36.30 O
ATOM 25 O5' C A2023 35.346 119.469 105.327 1.00 34.41 O
TER
ATOM 1 O3' U B2005 39.461 129.437 89.383 1.00 31.50 O
ATOM 2 P A B2006 39.128 130.565 90.471 1.00 31.39 P
ATOM 3 OP1 A B2006 38.679 131.788 89.789 1.00 31.11 O
ATOM 4 OP2 A B2006 40.277 130.631 91.406 1.00 33.34 O
ATOM 5 O5' A B2006 37.907 129.961 91.290 1.00 31.70 O
ATOM 6 C5' A B2006 36.702 129.525 90.644 1.00 30.81 C
ATOM 7 C4' A B2006 35.843 128.750 91.618 1.00 33.78 C
ATOM 8 O4' A B2006 36.485 127.497 91.964 1.00 35.46 O
ATOM 9 C3' A B2006 35.597 129.442 92.946 1.00 32.58 C
ATOM 10 O3' A B2006 34.476 130.317 92.872 1.00 32.22 O
ATOM 11 C2' A B2006 35.333 128.282 93.892 1.00 34.12 C
ATOM 12 O2' A B2006 33.986 127.874 93.810 1.00 35.02 O
ATOM 13 C1' A B2006 36.240 127.188 93.323 1.00 34.95 C
ATOM 14 N9 A B2006 37.523 127.104 94.028 1.00 36.42 N
ATOM 15 C8 A B2006 38.729 127.675 93.699 1.00 37.45 C
ATOM 16 N7 A B2006 39.676 127.447 94.570 1.00 35.26 N
ATOM 17 C5 A B2006 39.057 126.670 95.534 1.00 35.84 C
ATOM 18 C6 A B2006 39.520 126.110 96.728 1.00 35.05 C
ATOM 19 N6 A B2006 40.755 126.254 97.184 1.00 35.62 N
ATOM 20 N1 A B2006 38.658 125.387 97.452 1.00 35.67 N
ATOM 21 C2 A B2006 37.415 125.243 97.003 1.00 36.64 C
ATOM 22 N3 A B2006 36.856 125.722 95.905 1.00 35.79 N
ATOM 23 C4 A B2006 37.740 126.438 95.204 1.00 36.04 C
ATOM 24 P C B2007 34.459 131.666 93.740 1.00 32.47 P
ATOM 25 OP1 C B2007 33.296 132.460 93.320 1.00 34.44 O
ATOM 26 OP2 C B2007 35.797 132.260 93.668 1.00 33.11 O
ATOM 27 O5' C B2007 34.149 131.145 95.209 1.00 32.61 O
TER
ATOM 2 P U A2022 40.469 123.052 107.076 1.00 39.34 P
ATOM 3 OP1 U A2022 40.045 122.215 108.203 1.00 39.15 O
ATOM 4 OP2 U A2022 41.673 122.679 106.300 1.00 38.38 O
ATOM 5 O5' U A2022 39.281 123.184 106.025 1.00 39.17 O
ATOM 6 C5' U A2022 38.022 123.739 106.409 1.00 38.57 C
ATOM 7 C4' U A2022 37.005 123.524 105.330 1.00 37.86 C
ATOM 8 O4' U A2022 37.307 124.370 104.203 1.00 37.73 O
ATOM 9 C3' U A2022 36.913 122.099 104.807 1.00 38.43 C
ATOM 10 O3' U A2022 35.564 121.839 104.507 1.00 36.65 O
ATOM 11 C2' U A2022 37.672 122.154 103.488 1.00 38.17 C
ATOM 12 O2' U A2022 37.211 121.229 102.515 1.00 39.26 O
ATOM 13 C1' U A2022 37.395 123.585 103.039 1.00 37.48 C
ATOM 14 N1 U A2022 38.483 124.098 102.205 1.00 37.96 N
ATOM 15 C2 U A2022 38.198 124.416 100.892 1.00 36.45 C
ATOM 16 O2 U A2022 37.077 124.365 100.427 1.00 34.55 O
ATOM 17 N3 U A2022 39.284 124.796 100.148 1.00 34.73 N
ATOM 18 C4 U A2022 40.589 124.898 100.582 1.00 35.42 C
ATOM 19 O4 U A2022 41.477 125.113 99.764 1.00 36.60 O
ATOM 20 C5 U A2022 40.786 124.601 101.963 1.00 36.11 C
ATOM 21 C6 U A2022 39.755 124.222 102.706 1.00 38.00 C
ATOM 22 P C A2023 34.692 120.911 105.469 1.00 35.84 P
ATOM 23 OP1 C A2023 33.378 120.914 104.815 1.00 35.59 O
ATOM 24 OP2 C A2023 34.802 121.333 106.880 1.00 36.30 O
ATOM 25 O5' C A2023 35.346 119.469 105.327 1.00 34.41 O
TER
ATOM 1 O3' U B2005 39.461 129.437 89.383 1.00 31.50 O
ATOM 2 P A B2006 39.128 130.565 90.471 1.00 31.39 P
ATOM 3 OP1 A B2006 38.679 131.788 89.789 1.00 31.11 O
ATOM 4 OP2 A B2006 40.277 130.631 91.406 1.00 33.34 O
ATOM 5 O5' A B2006 37.907 129.961 91.290 1.00 31.70 O
ATOM 6 C5' A B2006 36.702 129.525 90.644 1.00 30.81 C
ATOM 7 C4' A B2006 35.843 128.750 91.618 1.00 33.78 C
ATOM 8 O4' A B2006 36.485 127.497 91.964 1.00 35.46 O
ATOM 9 C3' A B2006 35.597 129.442 92.946 1.00 32.58 C
ATOM 10 O3' A B2006 34.476 130.317 92.872 1.00 32.22 O
ATOM 11 C2' A B2006 35.333 128.282 93.892 1.00 34.12 C
ATOM 12 O2' A B2006 33.986 127.874 93.810 1.00 35.02 O
ATOM 13 C1' A B2006 36.240 127.188 93.323 1.00 34.95 C
ATOM 14 N9 A B2006 37.523 127.104 94.028 1.00 36.42 N
ATOM 15 C8 A B2006 38.729 127.675 93.699 1.00 37.45 C
ATOM 16 N7 A B2006 39.676 127.447 94.570 1.00 35.26 N
ATOM 17 C5 A B2006 39.057 126.670 95.534 1.00 35.84 C
ATOM 18 C6 A B2006 39.520 126.110 96.728 1.00 35.05 C
ATOM 19 N6 A B2006 40.755 126.254 97.184 1.00 35.62 N
ATOM 20 N1 A B2006 38.658 125.387 97.452 1.00 35.67 N
ATOM 21 C2 A B2006 37.415 125.243 97.003 1.00 36.64 C
ATOM 22 N3 A B2006 36.856 125.722 95.905 1.00 35.79 N
ATOM 23 C4 A B2006 37.740 126.438 95.204 1.00 36.04 C
ATOM 24 P C B2007 34.459 131.666 93.740 1.00 32.47 P
ATOM 25 OP1 C B2007 33.296 132.460 93.320 1.00 34.44 O
ATOM 26 OP2 C B2007 35.797 132.260 93.668 1.00 33.11 O
ATOM 27 O5' C B2007 34.149 131.145 95.209 1.00 32.61 O
TER
Atoms:
C4: (40.589,124.898,100.582)
N3: (39.284,124.796,100.148)
OP1: (40.045,122.215,108.203)
OP2: (41.673,122.679,106.300)
C2: (38.198,124.416,100.892)
C1': (37.395,123.585,103.039)
C3': (36.913,122.099,104.807)
O5': (39.281,123.184,106.025)
O4': (37.307,124.370,104.203)
C5': (38.022,123.739,106.409)
P: (40.469,123.052,107.076)
C4': (37.005,123.524,105.330)
C2': (37.672,122.154,103.488)
O2': (37.211,121.229,102.515)
N1: (38.483,124.098,102.205)
O4: (41.477,125.113,99.764)
O2: (37.077,124.365,100.427)
C6: (39.755,124.222,102.706)
C5: (40.786,124.601,101.963)
O3': (35.564,121.839,104.507)
N3: (39.284,124.796,100.148)
OP1: (40.045,122.215,108.203)
OP2: (41.673,122.679,106.300)
C2: (38.198,124.416,100.892)
C1': (37.395,123.585,103.039)
C3': (36.913,122.099,104.807)
O5': (39.281,123.184,106.025)
O4': (37.307,124.370,104.203)
C5': (38.022,123.739,106.409)
P: (40.469,123.052,107.076)
C4': (37.005,123.524,105.330)
C2': (37.672,122.154,103.488)
O2': (37.211,121.229,102.515)
N1: (38.483,124.098,102.205)
O4: (41.477,125.113,99.764)
O2: (37.077,124.365,100.427)
C6: (39.755,124.222,102.706)
C5: (40.786,124.601,101.963)
O3': (35.564,121.839,104.507)
OP1: (38.679,131.788,89.789)
OP2: (40.277,130.631,91.406)
C3': (35.597,129.442,92.946)
C1': (36.240,127.188,93.323)
C5': (36.702,129.525,90.644)
O4': (36.485,127.497,91.964)
C8: (38.729,127.675,93.699)
O2': (33.986,127.874,93.810)
C6: (39.520,126.110,96.728)
C5: (39.057,126.670,95.534)
C4: (37.740,126.438,95.204)
P: (39.128,130.565,90.471)
C4': (35.843,128.750,91.618)
C2': (35.333,128.282,93.892)
C2: (37.415,125.243,97.003)
N1: (38.658,125.387,97.452)
N3: (36.856,125.722,95.905)
N6: (40.755,126.254,97.184)
N7: (39.676,127.447,94.570)
N9: (37.523,127.104,94.028)
O5': (37.907,129.961,91.290)
O3': (34.476,130.317,92.872)
OP2: (40.277,130.631,91.406)
C3': (35.597,129.442,92.946)
C1': (36.240,127.188,93.323)
C5': (36.702,129.525,90.644)
O4': (36.485,127.497,91.964)
C8: (38.729,127.675,93.699)
O2': (33.986,127.874,93.810)
C6: (39.520,126.110,96.728)
C5: (39.057,126.670,95.534)
C4: (37.740,126.438,95.204)
P: (39.128,130.565,90.471)
C4': (35.843,128.750,91.618)
C2': (35.333,128.282,93.892)
C2: (37.415,125.243,97.003)
N1: (38.658,125.387,97.452)
N3: (36.856,125.722,95.905)
N6: (40.755,126.254,97.184)
N7: (39.676,127.447,94.570)
N9: (37.523,127.104,94.028)
O5': (37.907,129.961,91.290)
O3': (34.476,130.317,92.872)
Image (generated by PyMOL):