Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BNY:R1:R13
Extra
PDB:
ATOM 1 P U A 1 -99.469 -42.758 3.139 0.70 98.07 P
ATOM 2 OP1 U A 1 -100.713 -43.255 3.783 0.70 98.25 O
ATOM 3 OP2 U A 1 -99.345 -42.784 1.656 0.70 97.78 O
ATOM 4 O5' U A 1 -99.216 -41.263 3.633 0.70 95.38 O
ATOM 5 C5' U A 1 -99.499 -40.877 4.976 0.70 90.22 C
ATOM 6 C4' U A 1 -99.124 -39.429 5.195 0.70 86.99 C
ATOM 7 O4' U A 1 -97.702 -39.266 4.937 0.70 85.85 O
ATOM 8 C3' U A 1 -99.777 -38.420 4.262 0.70 85.30 C
ATOM 9 O3' U A 1 -101.083 -38.056 4.703 0.70 82.96 O
ATOM 10 C2' U A 1 -98.800 -37.253 4.334 0.70 84.65 C
ATOM 11 O2' U A 1 -98.933 -36.486 5.516 0.70 83.53 O
ATOM 12 C1' U A 1 -97.463 -37.994 4.351 0.70 84.43 C
ATOM 13 N1 U A 1 -96.917 -38.202 3.001 0.70 83.46 N
ATOM 14 C2 U A 1 -96.154 -37.185 2.450 0.70 82.65 C
ATOM 15 O2 U A 1 -95.918 -36.138 3.034 0.70 82.05 O
ATOM 16 N3 U A 1 -95.679 -37.439 1.186 0.70 81.72 N
ATOM 17 C4 U A 1 -95.886 -38.578 0.433 0.70 81.30 C
ATOM 18 O4 U A 1 -95.394 -38.654 -0.694 0.70 80.84 O
ATOM 19 C5 U A 1 -96.684 -39.581 1.071 0.70 81.51 C
ATOM 20 C6 U A 1 -97.159 -39.365 2.303 0.70 82.37 C
ATOM 21 P G A 2 -102.195 -37.619 3.623 0.70 80.41 P
ATOM 22 OP1 G A 2 -103.500 -37.513 4.327 0.70 80.27 O
ATOM 23 OP2 G A 2 -102.066 -38.522 2.447 0.70 79.69 O
ATOM 24 O5' G A 2 -101.744 -36.157 3.172 0.70 77.72 O
TER
ATOM 1 O3' C B 12 -89.224 -30.198 -5.259 0.70 88.03 O
ATOM 2 P A B 13 -88.238 -30.801 -4.140 0.70 89.43 P
ATOM 3 OP1 A B 13 -87.009 -29.971 -4.105 0.70 89.92 O
ATOM 4 OP2 A B 13 -88.131 -32.264 -4.390 0.70 88.96 O
ATOM 5 O5' A B 13 -89.028 -30.598 -2.770 0.70 90.04 O
ATOM 6 C5' A B 13 -89.275 -29.295 -2.248 0.70 91.05 C
ATOM 7 C4' A B 13 -90.128 -29.386 -1.005 0.70 92.33 C
ATOM 8 O4' A B 13 -91.415 -29.960 -1.356 0.70 92.48 O
ATOM 9 C3' A B 13 -89.595 -30.295 0.094 0.70 93.41 C
ATOM 10 O3' A B 13 -88.672 -29.599 0.930 0.70 95.58 O
ATOM 11 C2' A B 13 -90.868 -30.671 0.843 0.70 92.83 C
ATOM 12 O2' A B 13 -91.304 -29.669 1.740 0.70 92.84 O
ATOM 13 C1' A B 13 -91.867 -30.801 -0.307 0.70 92.19 C
ATOM 14 N9 A B 13 -91.963 -32.165 -0.825 0.70 91.32 N
ATOM 15 C8 A B 13 -91.258 -32.726 -1.863 0.70 90.87 C
ATOM 16 N7 A B 13 -91.561 -33.981 -2.092 0.70 90.58 N
ATOM 17 C5 A B 13 -92.532 -34.268 -1.141 0.70 90.48 C
ATOM 18 C6 A B 13 -93.260 -35.438 -0.852 0.70 89.86 C
ATOM 19 N6 A B 13 -93.116 -36.585 -1.519 0.70 89.08 N
ATOM 20 N1 A B 13 -94.152 -35.388 0.161 0.70 90.01 N
ATOM 21 C2 A B 13 -94.296 -34.236 0.834 0.70 90.38 C
ATOM 22 N3 A B 13 -93.670 -33.072 0.658 0.70 90.39 N
ATOM 23 C4 A B 13 -92.790 -33.156 -0.356 0.70 90.79 C
ATOM 24 P U B 14 -87.486 -30.406 1.661 0.70 96.46 P
ATOM 25 OP1 U B 14 -86.472 -29.421 2.123 0.70 96.19 O
ATOM 26 OP2 U B 14 -87.074 -31.514 0.757 0.70 96.19 O
ATOM 27 O5' U B 14 -88.182 -31.044 2.946 0.70 96.94 O
TER
ATOM 2 OP1 U A 1 -100.713 -43.255 3.783 0.70 98.25 O
ATOM 3 OP2 U A 1 -99.345 -42.784 1.656 0.70 97.78 O
ATOM 4 O5' U A 1 -99.216 -41.263 3.633 0.70 95.38 O
ATOM 5 C5' U A 1 -99.499 -40.877 4.976 0.70 90.22 C
ATOM 6 C4' U A 1 -99.124 -39.429 5.195 0.70 86.99 C
ATOM 7 O4' U A 1 -97.702 -39.266 4.937 0.70 85.85 O
ATOM 8 C3' U A 1 -99.777 -38.420 4.262 0.70 85.30 C
ATOM 9 O3' U A 1 -101.083 -38.056 4.703 0.70 82.96 O
ATOM 10 C2' U A 1 -98.800 -37.253 4.334 0.70 84.65 C
ATOM 11 O2' U A 1 -98.933 -36.486 5.516 0.70 83.53 O
ATOM 12 C1' U A 1 -97.463 -37.994 4.351 0.70 84.43 C
ATOM 13 N1 U A 1 -96.917 -38.202 3.001 0.70 83.46 N
ATOM 14 C2 U A 1 -96.154 -37.185 2.450 0.70 82.65 C
ATOM 15 O2 U A 1 -95.918 -36.138 3.034 0.70 82.05 O
ATOM 16 N3 U A 1 -95.679 -37.439 1.186 0.70 81.72 N
ATOM 17 C4 U A 1 -95.886 -38.578 0.433 0.70 81.30 C
ATOM 18 O4 U A 1 -95.394 -38.654 -0.694 0.70 80.84 O
ATOM 19 C5 U A 1 -96.684 -39.581 1.071 0.70 81.51 C
ATOM 20 C6 U A 1 -97.159 -39.365 2.303 0.70 82.37 C
ATOM 21 P G A 2 -102.195 -37.619 3.623 0.70 80.41 P
ATOM 22 OP1 G A 2 -103.500 -37.513 4.327 0.70 80.27 O
ATOM 23 OP2 G A 2 -102.066 -38.522 2.447 0.70 79.69 O
ATOM 24 O5' G A 2 -101.744 -36.157 3.172 0.70 77.72 O
TER
ATOM 1 O3' C B 12 -89.224 -30.198 -5.259 0.70 88.03 O
ATOM 2 P A B 13 -88.238 -30.801 -4.140 0.70 89.43 P
ATOM 3 OP1 A B 13 -87.009 -29.971 -4.105 0.70 89.92 O
ATOM 4 OP2 A B 13 -88.131 -32.264 -4.390 0.70 88.96 O
ATOM 5 O5' A B 13 -89.028 -30.598 -2.770 0.70 90.04 O
ATOM 6 C5' A B 13 -89.275 -29.295 -2.248 0.70 91.05 C
ATOM 7 C4' A B 13 -90.128 -29.386 -1.005 0.70 92.33 C
ATOM 8 O4' A B 13 -91.415 -29.960 -1.356 0.70 92.48 O
ATOM 9 C3' A B 13 -89.595 -30.295 0.094 0.70 93.41 C
ATOM 10 O3' A B 13 -88.672 -29.599 0.930 0.70 95.58 O
ATOM 11 C2' A B 13 -90.868 -30.671 0.843 0.70 92.83 C
ATOM 12 O2' A B 13 -91.304 -29.669 1.740 0.70 92.84 O
ATOM 13 C1' A B 13 -91.867 -30.801 -0.307 0.70 92.19 C
ATOM 14 N9 A B 13 -91.963 -32.165 -0.825 0.70 91.32 N
ATOM 15 C8 A B 13 -91.258 -32.726 -1.863 0.70 90.87 C
ATOM 16 N7 A B 13 -91.561 -33.981 -2.092 0.70 90.58 N
ATOM 17 C5 A B 13 -92.532 -34.268 -1.141 0.70 90.48 C
ATOM 18 C6 A B 13 -93.260 -35.438 -0.852 0.70 89.86 C
ATOM 19 N6 A B 13 -93.116 -36.585 -1.519 0.70 89.08 N
ATOM 20 N1 A B 13 -94.152 -35.388 0.161 0.70 90.01 N
ATOM 21 C2 A B 13 -94.296 -34.236 0.834 0.70 90.38 C
ATOM 22 N3 A B 13 -93.670 -33.072 0.658 0.70 90.39 N
ATOM 23 C4 A B 13 -92.790 -33.156 -0.356 0.70 90.79 C
ATOM 24 P U B 14 -87.486 -30.406 1.661 0.70 96.46 P
ATOM 25 OP1 U B 14 -86.472 -29.421 2.123 0.70 96.19 O
ATOM 26 OP2 U B 14 -87.074 -31.514 0.757 0.70 96.19 O
ATOM 27 O5' U B 14 -88.182 -31.044 2.946 0.70 96.94 O
TER
Atoms:
C4: (-95.886,-38.578,0.433)
N3: (-95.679,-37.439,1.186)
OP1: (-100.713,-43.255,3.783)
OP2: (-99.345,-42.784,1.656)
C2: (-96.154,-37.185,2.450)
C1': (-97.463,-37.994,4.351)
C3': (-99.777,-38.420,4.262)
O5': (-99.216,-41.263,3.633)
O4': (-97.702,-39.266,4.937)
C5': (-99.499,-40.877,4.976)
P: (-99.469,-42.758,3.139)
C4': (-99.124,-39.429,5.195)
C2': (-98.800,-37.253,4.334)
O2': (-98.933,-36.486,5.516)
N1: (-96.917,-38.202,3.001)
O4: (-95.394,-38.654,-0.694)
O2: (-95.918,-36.138,3.034)
C6: (-97.159,-39.365,2.303)
C5: (-96.684,-39.581,1.071)
O3': (-101.083,-38.056,4.703)
N3: (-95.679,-37.439,1.186)
OP1: (-100.713,-43.255,3.783)
OP2: (-99.345,-42.784,1.656)
C2: (-96.154,-37.185,2.450)
C1': (-97.463,-37.994,4.351)
C3': (-99.777,-38.420,4.262)
O5': (-99.216,-41.263,3.633)
O4': (-97.702,-39.266,4.937)
C5': (-99.499,-40.877,4.976)
P: (-99.469,-42.758,3.139)
C4': (-99.124,-39.429,5.195)
C2': (-98.800,-37.253,4.334)
O2': (-98.933,-36.486,5.516)
N1: (-96.917,-38.202,3.001)
O4: (-95.394,-38.654,-0.694)
O2: (-95.918,-36.138,3.034)
C6: (-97.159,-39.365,2.303)
C5: (-96.684,-39.581,1.071)
O3': (-101.083,-38.056,4.703)
OP1: (-87.009,-29.971,-4.105)
OP2: (-88.131,-32.264,-4.390)
C3': (-89.595,-30.295,0.094)
C1': (-91.867,-30.801,-0.307)
C5': (-89.275,-29.295,-2.248)
O4': (-91.415,-29.960,-1.356)
C8: (-91.258,-32.726,-1.863)
O2': (-91.304,-29.669,1.740)
C6: (-93.260,-35.438,-0.852)
C5: (-92.532,-34.268,-1.141)
C4: (-92.790,-33.156,-0.356)
P: (-88.238,-30.801,-4.140)
C4': (-90.128,-29.386,-1.005)
C2': (-90.868,-30.671,0.843)
C2: (-94.296,-34.236,0.834)
N1: (-94.152,-35.388,0.161)
N3: (-93.670,-33.072,0.658)
N6: (-93.116,-36.585,-1.519)
N7: (-91.561,-33.981,-2.092)
N9: (-91.963,-32.165,-0.825)
O5': (-89.028,-30.598,-2.770)
O3': (-88.672,-29.599,0.930)
OP2: (-88.131,-32.264,-4.390)
C3': (-89.595,-30.295,0.094)
C1': (-91.867,-30.801,-0.307)
C5': (-89.275,-29.295,-2.248)
O4': (-91.415,-29.960,-1.356)
C8: (-91.258,-32.726,-1.863)
O2': (-91.304,-29.669,1.740)
C6: (-93.260,-35.438,-0.852)
C5: (-92.532,-34.268,-1.141)
C4: (-92.790,-33.156,-0.356)
P: (-88.238,-30.801,-4.140)
C4': (-90.128,-29.386,-1.005)
C2': (-90.868,-30.671,0.843)
C2: (-94.296,-34.236,0.834)
N1: (-94.152,-35.388,0.161)
N3: (-93.670,-33.072,0.658)
N6: (-93.116,-36.585,-1.519)
N7: (-91.561,-33.981,-2.092)
N9: (-91.963,-32.165,-0.825)
O5': (-89.028,-30.598,-2.770)
O3': (-88.672,-29.599,0.930)
Image (generated by PyMOL):