ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1S03:B19:B30

Extra

PDB:
ATOM 1 O3' A A 18 31.319 -15.941 115.922 1.00 13.30 O
ATOM 2 P U A 19 31.139 -15.995 117.474 1.00 14.54 P
ATOM 3 OP1 U A 19 30.309 -17.177 117.781 1.00 10.60 O
ATOM 4 OP2 U A 19 30.704 -14.667 117.969 1.00 13.81 O
ATOM 5 O5' U A 19 32.652 -16.148 117.917 1.00 11.31 O
ATOM 6 C5' U A 19 33.215 -17.399 118.296 1.00 11.91 C
ATOM 7 C4' U A 19 34.610 -17.141 118.832 1.00 16.18 C
ATOM 8 O4' U A 19 35.280 -16.095 118.044 1.00 16.33 O
ATOM 9 C3' U A 19 34.589 -16.530 120.216 1.00 19.13 C
ATOM 10 O3' U A 19 34.211 -17.553 121.123 1.00 23.77 O
ATOM 11 C2' U A 19 36.024 -15.997 120.292 1.00 21.17 C
ATOM 12 O2' U A 19 37.006 -17.024 120.398 1.00 30.38 O
ATOM 13 C1' U A 19 36.150 -15.363 118.896 1.00 22.45 C
ATOM 14 N1 U A 19 35.794 -13.948 118.935 1.00 22.21 N
ATOM 15 C2 U A 19 36.717 -13.040 119.431 1.00 27.27 C
ATOM 16 O2 U A 19 37.832 -13.316 119.802 1.00 32.06 O
ATOM 17 N3 U A 19 36.287 -11.756 119.473 1.00 28.49 N
ATOM 18 C4 U A 19 35.035 -11.321 119.106 1.00 26.26 C
ATOM 19 O4 U A 19 34.791 -10.140 119.201 1.00 27.10 O
ATOM 20 C5 U A 19 34.117 -12.308 118.635 1.00 21.47 C
ATOM 21 C6 U A 19 34.522 -13.571 118.561 1.00 18.99 C
ATOM 22 P G A 20 33.446 -17.233 122.495 1.00 23.79 P
ATOM 23 OP1 G A 20 33.232 -18.511 123.160 1.00 20.53 O
ATOM 24 OP2 G A 20 32.300 -16.337 122.225 1.00 22.94 O
ATOM 25 O5' G A 20 34.556 -16.422 123.318 1.00 21.80 O
TER

ATOM 1 O3' C B 29 41.891 -1.918 123.407 1.00 27.83 O
ATOM 2 P A B 30 42.557 -2.483 122.072 1.00 31.58 P
ATOM 3 OP1 A B 30 43.882 -1.871 121.790 1.00 25.69 O
ATOM 4 OP2 A B 30 41.563 -2.425 120.975 1.00 27.76 O
ATOM 5 O5' A B 30 42.709 -4.009 122.553 1.00 26.72 O
ATOM 6 C5' A B 30 43.908 -4.551 122.964 1.00 25.90 C
ATOM 7 C4' A B 30 43.826 -6.062 122.861 1.00 25.12 C
ATOM 8 O4' A B 30 42.605 -6.588 123.429 1.00 23.00 O
ATOM 9 C3' A B 30 43.802 -6.587 121.437 1.00 26.52 C
ATOM 10 O3' A B 30 45.093 -6.480 120.969 1.00 28.19 O
ATOM 11 C2' A B 30 43.383 -8.016 121.719 1.00 29.45 C
ATOM 12 O2' A B 30 44.352 -8.753 122.418 1.00 30.46 O
ATOM 13 C1' A B 30 42.224 -7.745 122.672 1.00 27.42 C
ATOM 14 N9 A B 30 40.922 -7.571 121.989 1.00 24.22 N
ATOM 15 C8 A B 30 40.277 -6.401 121.693 1.00 25.23 C
ATOM 16 N7 A B 30 39.105 -6.531 121.093 1.00 21.05 N
ATOM 17 C5 A B 30 38.971 -7.905 120.993 1.00 23.83 C
ATOM 18 C6 A B 30 37.958 -8.743 120.462 1.00 21.59 C
ATOM 19 N6 A B 30 36.845 -8.365 119.886 1.00 15.57 N
ATOM 20 N1 A B 30 38.119 -10.051 120.496 1.00 24.97 N
ATOM 21 C2 A B 30 39.237 -10.489 121.053 1.00 27.58 C
ATOM 22 N3 A B 30 40.249 -9.823 121.611 1.00 27.02 N
ATOM 23 C4 A B 30 40.072 -8.529 121.530 1.00 22.61 C
ATOM 24 P U B 31 45.504 -6.460 119.435 1.00 30.47 P
ATOM 25 OP1 U B 31 46.973 -6.364 119.270 1.00 32.01 O
ATOM 26 OP2 U B 31 44.690 -5.488 118.675 1.00 29.02 O
ATOM 27 O5' U B 31 45.070 -7.948 119.079 1.00 32.40 O
TER

Atoms:
C4: (35.035,-11.321,119.106)
N3: (36.287,-11.756,119.473)
OP1: (30.309,-17.177,117.781)
OP2: (30.704,-14.667,117.969)
C2: (36.717,-13.040,119.431)
C1': (36.150,-15.363,118.896)
C3': (34.589,-16.530,120.216)
O5': (32.652,-16.148,117.917)
O4': (35.280,-16.095,118.044)
C5': (33.215,-17.399,118.296)
P: (31.139,-15.995,117.474)
C4': (34.610,-17.141,118.832)
C2': (36.024,-15.997,120.292)
O2': (37.006,-17.024,120.398)
N1: (35.794,-13.948,118.935)
O4: (34.791,-10.140,119.201)
O2: (37.832,-13.316,119.802)
C6: (34.522,-13.571,118.561)
C5: (34.117,-12.308,118.635)
O3': (34.211,-17.553,121.123)
OP1: (43.882,-1.871,121.790)
OP2: (41.563,-2.425,120.975)
C3': (43.802,-6.587,121.437)
C1': (42.224,-7.745,122.672)
C5': (43.908,-4.551,122.964)
O4': (42.605,-6.588,123.429)
C8: (40.277,-6.401,121.693)
O2': (44.352,-8.753,122.418)
C6: (37.958,-8.743,120.462)
C5: (38.971,-7.905,120.993)
C4: (40.072,-8.529,121.530)
P: (42.557,-2.483,122.072)
C4': (43.826,-6.062,122.861)
C2': (43.383,-8.016,121.719)
C2: (39.237,-10.489,121.053)
N1: (38.119,-10.051,120.496)
N3: (40.249,-9.823,121.611)
N6: (36.845,-8.365,119.886)
N7: (39.105,-6.531,121.093)
N9: (40.922,-7.571,121.989)
O5': (42.709,-4.009,122.553)
O3': (45.093,-6.480,120.969)
Image (generated by PyMOL):
PyMOL image
show in jmol