Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12268:12343
Extra
PDB:
ATOM 1 O3' A A2267 17.850 -30.290 137.199 1.00 60.40 O
ATOM 2 P U A2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 3 OP1 U A2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 4 OP2 U A2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 5 O5' U A2268 17.028 -28.580 135.583 1.00 66.88 O
ATOM 6 C5' U A2268 17.657 -29.017 134.396 1.00 66.40 C
ATOM 7 C4' U A2268 16.668 -29.119 133.275 1.00 66.01 C
ATOM 8 O4' U A2268 15.668 -30.126 133.594 1.00 66.30 O
ATOM 9 C3' U A2268 15.836 -27.877 133.019 1.00 65.84 C
ATOM 10 O3' U A2268 16.525 -26.855 132.302 1.00 65.43 O
ATOM 11 C2' U A2268 14.643 -28.459 132.290 1.00 65.69 C
ATOM 12 O2' U A2268 15.019 -28.880 130.994 1.00 65.19 O
ATOM 13 C1' U A2268 14.410 -29.707 133.113 1.00 66.15 C
ATOM 14 N1 U A2268 13.504 -29.463 134.263 1.00 66.66 N
ATOM 15 C2 U A2268 12.156 -29.371 134.001 1.00 66.65 C
ATOM 16 O2 U A2268 11.695 -29.453 132.897 1.00 66.25 O
ATOM 17 N3 U A2268 11.325 -29.183 135.050 1.00 67.12 N
ATOM 18 C4 U A2268 11.693 -29.075 136.354 1.00 67.62 C
ATOM 19 O4 U A2268 10.820 -28.908 137.214 1.00 68.04 O
ATOM 20 C5 U A2268 13.109 -29.190 136.560 1.00 67.61 C
ATOM 21 C6 U A2268 13.955 -29.381 135.543 1.00 67.14 C
ATOM 22 P U A2269 16.324 -25.314 132.724 1.00 60.81 P
ATOM 23 OP1 U A2269 17.294 -24.509 131.936 1.00 60.38 O
ATOM 24 OP2 U A2269 16.371 -25.261 134.221 1.00 61.41 O
ATOM 25 O5' U A2269 14.851 -24.992 132.227 1.00 60.69 O
TER
ATOM 1 O3' A B2342 0.126 -23.944 135.937 1.00 76.43 O
ATOM 2 P A B2343 -0.127 -25.541 136.066 1.00 81.31 P
ATOM 3 OP1 A B2343 -1.471 -25.809 135.501 1.00 81.29 O
ATOM 4 OP2 A B2343 0.142 -25.943 137.480 1.00 81.89 O
ATOM 5 O5' A B2343 0.985 -26.142 135.105 1.00 80.82 O
ATOM 6 C5' A B2343 1.219 -25.569 133.832 1.00 80.24 C
ATOM 7 C4' A B2343 2.548 -25.996 133.280 1.00 79.88 C
ATOM 8 O4' A B2343 3.613 -25.288 133.965 1.00 79.97 O
ATOM 9 C3' A B2343 2.908 -27.457 133.466 1.00 80.01 C
ATOM 10 O3' A B2343 2.320 -28.298 132.503 1.00 79.78 O
ATOM 11 C2' A B2343 4.420 -27.429 133.384 1.00 79.80 C
ATOM 12 O2' A B2343 4.832 -27.280 132.029 1.00 79.21 O
ATOM 13 C1' A B2343 4.729 -26.137 134.126 1.00 79.96 C
ATOM 14 N9 A B2343 4.936 -26.367 135.566 1.00 80.53 N
ATOM 15 C8 A B2343 4.131 -25.987 136.612 1.00 81.03 C
ATOM 16 N7 A B2343 4.570 -26.317 137.798 1.00 81.50 N
ATOM 17 C5 A B2343 5.757 -26.969 137.511 1.00 81.30 C
ATOM 18 C6 A B2343 6.718 -27.561 138.349 1.00 81.60 C
ATOM 19 N6 A B2343 6.587 -27.585 139.676 1.00 82.19 N
ATOM 20 N1 A B2343 7.805 -28.126 137.767 1.00 81.29 N
ATOM 21 C2 A B2343 7.911 -28.088 136.421 1.00 80.71 C
ATOM 22 N3 A B2343 7.079 -27.560 135.514 1.00 80.37 N
ATOM 23 C4 A B2343 6.004 -27.010 136.139 1.00 80.70 C
ATOM 24 P G B2344 1.764 -29.730 132.951 1.00 68.35 P
ATOM 25 OP1 G B2344 0.889 -30.247 131.856 1.00 68.10 O
ATOM 26 OP2 G B2344 1.183 -29.562 134.320 1.00 68.95 O
ATOM 27 O5' G B2344 3.083 -30.604 133.050 1.00 68.31 O
TER
ATOM 2 P U A2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 3 OP1 U A2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 4 OP2 U A2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 5 O5' U A2268 17.028 -28.580 135.583 1.00 66.88 O
ATOM 6 C5' U A2268 17.657 -29.017 134.396 1.00 66.40 C
ATOM 7 C4' U A2268 16.668 -29.119 133.275 1.00 66.01 C
ATOM 8 O4' U A2268 15.668 -30.126 133.594 1.00 66.30 O
ATOM 9 C3' U A2268 15.836 -27.877 133.019 1.00 65.84 C
ATOM 10 O3' U A2268 16.525 -26.855 132.302 1.00 65.43 O
ATOM 11 C2' U A2268 14.643 -28.459 132.290 1.00 65.69 C
ATOM 12 O2' U A2268 15.019 -28.880 130.994 1.00 65.19 O
ATOM 13 C1' U A2268 14.410 -29.707 133.113 1.00 66.15 C
ATOM 14 N1 U A2268 13.504 -29.463 134.263 1.00 66.66 N
ATOM 15 C2 U A2268 12.156 -29.371 134.001 1.00 66.65 C
ATOM 16 O2 U A2268 11.695 -29.453 132.897 1.00 66.25 O
ATOM 17 N3 U A2268 11.325 -29.183 135.050 1.00 67.12 N
ATOM 18 C4 U A2268 11.693 -29.075 136.354 1.00 67.62 C
ATOM 19 O4 U A2268 10.820 -28.908 137.214 1.00 68.04 O
ATOM 20 C5 U A2268 13.109 -29.190 136.560 1.00 67.61 C
ATOM 21 C6 U A2268 13.955 -29.381 135.543 1.00 67.14 C
ATOM 22 P U A2269 16.324 -25.314 132.724 1.00 60.81 P
ATOM 23 OP1 U A2269 17.294 -24.509 131.936 1.00 60.38 O
ATOM 24 OP2 U A2269 16.371 -25.261 134.221 1.00 61.41 O
ATOM 25 O5' U A2269 14.851 -24.992 132.227 1.00 60.69 O
TER
ATOM 1 O3' A B2342 0.126 -23.944 135.937 1.00 76.43 O
ATOM 2 P A B2343 -0.127 -25.541 136.066 1.00 81.31 P
ATOM 3 OP1 A B2343 -1.471 -25.809 135.501 1.00 81.29 O
ATOM 4 OP2 A B2343 0.142 -25.943 137.480 1.00 81.89 O
ATOM 5 O5' A B2343 0.985 -26.142 135.105 1.00 80.82 O
ATOM 6 C5' A B2343 1.219 -25.569 133.832 1.00 80.24 C
ATOM 7 C4' A B2343 2.548 -25.996 133.280 1.00 79.88 C
ATOM 8 O4' A B2343 3.613 -25.288 133.965 1.00 79.97 O
ATOM 9 C3' A B2343 2.908 -27.457 133.466 1.00 80.01 C
ATOM 10 O3' A B2343 2.320 -28.298 132.503 1.00 79.78 O
ATOM 11 C2' A B2343 4.420 -27.429 133.384 1.00 79.80 C
ATOM 12 O2' A B2343 4.832 -27.280 132.029 1.00 79.21 O
ATOM 13 C1' A B2343 4.729 -26.137 134.126 1.00 79.96 C
ATOM 14 N9 A B2343 4.936 -26.367 135.566 1.00 80.53 N
ATOM 15 C8 A B2343 4.131 -25.987 136.612 1.00 81.03 C
ATOM 16 N7 A B2343 4.570 -26.317 137.798 1.00 81.50 N
ATOM 17 C5 A B2343 5.757 -26.969 137.511 1.00 81.30 C
ATOM 18 C6 A B2343 6.718 -27.561 138.349 1.00 81.60 C
ATOM 19 N6 A B2343 6.587 -27.585 139.676 1.00 82.19 N
ATOM 20 N1 A B2343 7.805 -28.126 137.767 1.00 81.29 N
ATOM 21 C2 A B2343 7.911 -28.088 136.421 1.00 80.71 C
ATOM 22 N3 A B2343 7.079 -27.560 135.514 1.00 80.37 N
ATOM 23 C4 A B2343 6.004 -27.010 136.139 1.00 80.70 C
ATOM 24 P G B2344 1.764 -29.730 132.951 1.00 68.35 P
ATOM 25 OP1 G B2344 0.889 -30.247 131.856 1.00 68.10 O
ATOM 26 OP2 G B2344 1.183 -29.562 134.320 1.00 68.95 O
ATOM 27 O5' G B2344 3.083 -30.604 133.050 1.00 68.31 O
TER
Atoms:
C4: (11.693,-29.075,136.354)
N3: (11.325,-29.183,135.050)
OP1: (19.161,-28.214,136.798)
OP2: (16.948,-28.122,138.035)
C2: (12.156,-29.371,134.001)
C1': (14.410,-29.707,133.113)
C3': (15.836,-27.877,133.019)
O5': (17.028,-28.580,135.583)
O4': (15.668,-30.126,133.594)
C5': (17.657,-29.017,134.396)
P: (17.776,-28.696,136.959)
C4': (16.668,-29.119,133.275)
C2': (14.643,-28.459,132.290)
O2': (15.019,-28.880,130.994)
N1: (13.504,-29.463,134.263)
O4: (10.820,-28.908,137.214)
O2: (11.695,-29.453,132.897)
C6: (13.955,-29.381,135.543)
C5: (13.109,-29.190,136.560)
O3': (16.525,-26.855,132.302)
N3: (11.325,-29.183,135.050)
OP1: (19.161,-28.214,136.798)
OP2: (16.948,-28.122,138.035)
C2: (12.156,-29.371,134.001)
C1': (14.410,-29.707,133.113)
C3': (15.836,-27.877,133.019)
O5': (17.028,-28.580,135.583)
O4': (15.668,-30.126,133.594)
C5': (17.657,-29.017,134.396)
P: (17.776,-28.696,136.959)
C4': (16.668,-29.119,133.275)
C2': (14.643,-28.459,132.290)
O2': (15.019,-28.880,130.994)
N1: (13.504,-29.463,134.263)
O4: (10.820,-28.908,137.214)
O2: (11.695,-29.453,132.897)
C6: (13.955,-29.381,135.543)
C5: (13.109,-29.190,136.560)
O3': (16.525,-26.855,132.302)
OP1: (-1.471,-25.809,135.501)
OP2: (0.142,-25.943,137.480)
C3': (2.908,-27.457,133.466)
C1': (4.729,-26.137,134.126)
C5': (1.219,-25.569,133.832)
O4': (3.613,-25.288,133.965)
C8: (4.131,-25.987,136.612)
O2': (4.832,-27.280,132.029)
C6: (6.718,-27.561,138.349)
C5: (5.757,-26.969,137.511)
C4: (6.004,-27.010,136.139)
P: (-0.127,-25.541,136.066)
C4': (2.548,-25.996,133.280)
C2': (4.420,-27.429,133.384)
C2: (7.911,-28.088,136.421)
N1: (7.805,-28.126,137.767)
N3: (7.079,-27.560,135.514)
N6: (6.587,-27.585,139.676)
N7: (4.570,-26.317,137.798)
N9: (4.936,-26.367,135.566)
O5': (0.985,-26.142,135.105)
O3': (2.320,-28.298,132.503)
OP2: (0.142,-25.943,137.480)
C3': (2.908,-27.457,133.466)
C1': (4.729,-26.137,134.126)
C5': (1.219,-25.569,133.832)
O4': (3.613,-25.288,133.965)
C8: (4.131,-25.987,136.612)
O2': (4.832,-27.280,132.029)
C6: (6.718,-27.561,138.349)
C5: (5.757,-26.969,137.511)
C4: (6.004,-27.010,136.139)
P: (-0.127,-25.541,136.066)
C4': (2.548,-25.996,133.280)
C2': (4.420,-27.429,133.384)
C2: (7.911,-28.088,136.421)
N1: (7.805,-28.126,137.767)
N3: (7.079,-27.560,135.514)
N6: (6.587,-27.585,139.676)
N7: (4.570,-26.317,137.798)
N9: (4.936,-26.367,135.566)
O5': (0.985,-26.142,135.105)
O3': (2.320,-28.298,132.503)
Image (generated by PyMOL):