ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01077:01078

Extra

PDB:
ATOM 1 O3' A A1076 36.567 104.093 144.184 1.00 48.11 O
ATOM 2 P A A1077 38.082 104.402 144.647 1.00 49.11 P
ATOM 3 OP1 A A1077 38.514 103.374 145.638 1.00 48.27 O
ATOM 4 OP2 A A1077 38.166 105.844 144.999 1.00 44.43 O
ATOM 5 O5' A A1077 38.931 104.152 143.318 1.00 48.28 O
ATOM 6 C5' A A1077 38.786 105.013 142.177 1.00 43.38 C
ATOM 7 C4' A A1077 39.488 104.422 140.978 1.00 44.38 C
ATOM 8 O4' A A1077 38.910 103.122 140.636 1.00 43.31 O
ATOM 9 C3' A A1077 39.329 105.245 139.707 1.00 43.94 C
ATOM 10 O3' A A1077 40.176 106.359 139.607 1.00 46.00 O
ATOM 11 C2' A A1077 39.444 104.201 138.616 1.00 42.84 C
ATOM 12 O2' A A1077 40.769 103.781 138.378 1.00 42.85 O
ATOM 13 C1' A A1077 38.597 103.092 139.245 1.00 43.26 C
ATOM 14 N9 A A1077 37.175 103.419 139.103 1.00 42.49 N
ATOM 15 C8 A A1077 36.560 104.668 139.066 1.00 40.89 C
ATOM 16 N7 A A1077 35.262 104.617 138.914 1.00 39.32 N
ATOM 17 C5 A A1077 34.998 103.259 138.854 1.00 40.86 C
ATOM 18 C6 A A1077 33.817 102.554 138.711 1.00 42.31 C
ATOM 19 N6 A A1077 32.632 103.127 138.601 1.00 43.91 N
ATOM 20 N1 A A1077 33.891 101.208 138.687 1.00 48.36 N
ATOM 21 C2 A A1077 35.100 100.626 138.807 1.00 45.75 C
ATOM 22 N3 A A1077 36.289 101.183 138.959 1.00 41.23 N
ATOM 23 C4 A A1077 36.168 102.514 138.972 1.00 40.80 C
ATOM 24 P G A1078 39.519 107.801 139.383 1.00 47.91 P
ATOM 25 OP1 G A1078 40.622 108.783 139.184 1.00 49.49 O
ATOM 26 OP2 G A1078 38.508 108.047 140.441 1.00 48.88 O
ATOM 27 O5' G A1078 38.768 107.621 137.995 1.00 47.70 O
TER

ATOM 1 O3' A B1077 40.176 106.359 139.607 1.00 46.00 O
ATOM 2 P G B1078 39.519 107.801 139.383 1.00 47.91 P
ATOM 3 OP1 G B1078 40.622 108.783 139.184 1.00 49.49 O
ATOM 4 OP2 G B1078 38.508 108.047 140.441 1.00 48.88 O
ATOM 5 O5' G B1078 38.768 107.621 137.995 1.00 47.70 O
ATOM 6 C5' G B1078 37.337 107.645 137.902 1.00 45.92 C
ATOM 7 C4' G B1078 36.927 107.154 136.545 1.00 44.06 C
ATOM 8 O4' G B1078 35.483 107.092 136.443 1.00 43.52 O
ATOM 9 C3' G B1078 37.397 108.046 135.401 1.00 44.46 C
ATOM 10 O3' G B1078 37.698 107.220 134.292 1.00 44.54 O
ATOM 11 C2' G B1078 36.171 108.906 135.124 1.00 44.84 C
ATOM 12 O2' G B1078 36.109 109.426 133.813 1.00 45.93 O
ATOM 13 C1' G B1078 35.063 107.886 135.354 1.00 43.70 C
ATOM 14 N9 G B1078 33.732 108.415 135.630 1.00 40.07 N
ATOM 15 C8 G B1078 33.356 109.699 135.939 1.00 37.65 C
ATOM 16 N7 G B1078 32.062 109.839 136.037 1.00 38.84 N
ATOM 17 C5 G B1078 31.566 108.565 135.798 1.00 37.59 C
ATOM 18 C6 G B1078 30.231 108.086 135.740 1.00 37.53 C
ATOM 19 O6 G B1078 29.178 108.719 135.875 1.00 37.04 O
ATOM 20 N1 G B1078 30.194 106.722 135.479 1.00 34.00 N
ATOM 21 C2 G B1078 31.301 105.934 135.280 1.00 37.77 C
ATOM 22 N2 G B1078 31.101 104.645 135.040 1.00 35.05 N
ATOM 23 N3 G B1078 32.532 106.374 135.311 1.00 36.82 N
ATOM 24 C4 G B1078 32.591 107.681 135.572 1.00 37.52 C
ATOM 25 P U B1079 39.209 106.748 134.053 1.00 44.60 P
ATOM 26 OP1 U B1079 40.101 107.639 134.850 1.00 47.56 O
ATOM 27 OP2 U B1079 39.426 106.600 132.589 1.00 47.90 O
ATOM 28 O5' U B1079 39.265 105.301 134.688 1.00 42.74 O
TER

Atoms:
OP1: (38.514,103.374,145.638)
OP2: (38.166,105.844,144.999)
C3': (39.329,105.245,139.707)
C1': (38.597,103.092,139.245)
C5': (38.786,105.013,142.177)
O4': (38.910,103.122,140.636)
C8: (36.560,104.668,139.066)
O2': (40.769,103.781,138.378)
C6: (33.817,102.554,138.711)
C5: (34.998,103.259,138.854)
C4: (36.168,102.514,138.972)
P: (38.082,104.402,144.647)
C4': (39.488,104.422,140.978)
C2': (39.444,104.201,138.616)
C2: (35.100,100.626,138.807)
N1: (33.891,101.208,138.687)
N3: (36.289,101.183,138.959)
N6: (32.632,103.127,138.601)
N7: (35.262,104.617,138.914)
N9: (37.175,103.419,139.103)
O5': (38.931,104.152,143.318)
O3': (40.176,106.359,139.607)
OP1: (40.622,108.783,139.184)
OP2: (38.508,108.047,140.441)
C3': (37.397,108.046,135.401)
C1': (35.063,107.886,135.354)
C5': (37.337,107.645,137.902)
O6: (29.178,108.719,135.875)
O4': (35.483,107.092,136.443)
C8: (33.356,109.699,135.939)
C2: (31.301,105.934,135.280)
C6: (30.231,108.086,135.740)
C5: (31.566,108.565,135.798)
C4: (32.591,107.681,135.572)
P: (39.519,107.801,139.383)
C4': (36.927,107.154,136.545)
C2': (36.171,108.906,135.124)
O2': (36.109,109.426,133.813)
N1: (30.194,106.722,135.479)
N2: (31.101,104.645,135.040)
N3: (32.532,106.374,135.311)
N7: (32.062,109.839,136.037)
N9: (33.732,108.415,135.630)
O5': (38.768,107.621,137.995)
O3': (37.698,107.220,134.292)
Image (generated by PyMOL):
PyMOL image
show in jmol