ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GTR:B11:B7

Extra

PDB:
ATOM 1 O3' C A 10 29.357 23.451 24.950 1.00 12.87 O
ATOM 2 P A A 11 28.624 24.880 24.789 1.00 13.09 P
ATOM 3 OP1 A A 11 29.558 25.725 24.024 1.00 9.43 O
ATOM 4 OP2 A A 11 28.369 25.185 26.216 1.00 12.79 O
ATOM 5 O5' A A 11 27.199 24.897 24.037 1.00 15.30 O
ATOM 6 C5' A A 11 27.010 24.548 22.667 1.00 17.28 C
ATOM 7 C4' A A 11 25.538 24.283 22.351 1.00 20.19 C
ATOM 8 O4' A A 11 25.016 23.268 23.220 1.00 21.80 O
ATOM 9 C3' A A 11 24.672 25.490 22.637 1.00 21.16 C
ATOM 10 O3' A A 11 24.726 26.392 21.521 1.00 21.89 O
ATOM 11 C2' A A 11 23.315 24.826 22.755 1.00 21.34 C
ATOM 12 O2' A A 11 22.809 24.420 21.486 1.00 22.88 O
ATOM 13 C1' A A 11 23.636 23.551 23.510 1.00 21.56 C
ATOM 14 N9 A A 11 23.436 23.699 24.976 1.00 21.58 N
ATOM 15 C8 A A 11 24.371 23.911 25.954 1.00 22.34 C
ATOM 16 N7 A A 11 23.890 23.936 27.163 1.00 22.46 N
ATOM 17 C5 A A 11 22.533 23.727 26.982 1.00 22.72 C
ATOM 18 C6 A A 11 21.467 23.643 27.885 1.00 22.39 C
ATOM 19 N6 A A 11 21.617 23.759 29.208 1.00 22.69 N
ATOM 20 N1 A A 11 20.252 23.432 27.374 1.00 22.56 N
ATOM 21 C2 A A 11 20.110 23.313 26.068 1.00 22.53 C
ATOM 22 N3 A A 11 21.023 23.369 25.117 1.00 23.16 N
ATOM 23 C4 A A 11 22.241 23.583 25.655 1.00 22.95 C
ATOM 24 P A A 12 24.038 27.849 21.511 1.00 24.58 P
ATOM 25 OP1 A A 12 24.607 28.098 20.167 1.00 22.55 O
ATOM 26 OP2 A A 12 24.549 28.615 22.667 1.00 24.48 O
ATOM 27 O5' A A 12 22.440 28.063 21.445 1.00 24.68 O
TER

ATOM 1 O3' U B 6 22.200 24.989 33.430 1.00 30.31 O
ATOM 2 P C B 7 23.135 23.744 33.020 1.00 34.29 P
ATOM 3 OP1 C B 7 24.024 24.098 34.154 1.00 34.73 O
ATOM 4 OP2 C B 7 23.674 23.697 31.639 1.00 34.17 O
ATOM 5 O5' C B 7 22.449 22.329 33.344 1.00 35.19 O
ATOM 6 C5' C B 7 22.219 21.927 34.700 1.00 35.69 C
ATOM 7 C4' C B 7 21.743 20.480 34.834 1.00 36.08 C
ATOM 8 O4' C B 7 20.571 20.284 34.023 1.00 36.79 O
ATOM 9 C3' C B 7 22.799 19.478 34.358 1.00 36.00 C
ATOM 10 O3' C B 7 22.666 18.304 35.161 1.00 33.87 O
ATOM 11 C2' C B 7 22.345 19.235 32.935 1.00 36.72 C
ATOM 12 O2' C B 7 22.798 17.965 32.457 1.00 37.06 O
ATOM 13 C1' C B 7 20.835 19.223 33.099 1.00 37.59 C
ATOM 14 N1 C B 7 20.089 19.481 31.827 1.00 38.53 N
ATOM 15 C2 C B 7 18.725 19.185 31.816 1.00 39.80 C
ATOM 16 O2 C B 7 18.136 18.795 32.829 1.00 40.14 O
ATOM 17 N3 C B 7 18.046 19.355 30.649 1.00 40.02 N
ATOM 18 C4 C B 7 18.653 19.796 29.541 1.00 39.38 C
ATOM 19 N4 C B 7 17.940 19.938 28.426 1.00 39.57 N
ATOM 20 C5 C B 7 20.044 20.112 29.535 1.00 38.90 C
ATOM 21 C6 C B 7 20.711 19.939 30.694 1.00 38.67 C
ATOM 22 P G B 8 23.372 18.228 36.604 1.00 32.05 P
ATOM 23 OP1 G B 8 22.721 17.172 37.415 1.00 33.68 O
ATOM 24 OP2 G B 8 23.634 19.558 37.201 1.00 31.98 O
ATOM 25 O5' G B 8 24.759 17.634 36.091 1.00 29.06 O
TER

Atoms:
OP1: (29.558,25.725,24.024)
OP2: (28.369,25.185,26.216)
C3': (24.672,25.490,22.637)
C1': (23.636,23.551,23.510)
C5': (27.010,24.548,22.667)
O4': (25.016,23.268,23.220)
C8: (24.371,23.911,25.954)
O2': (22.809,24.420,21.486)
C6: (21.467,23.643,27.885)
C5: (22.533,23.727,26.982)
C4: (22.241,23.583,25.655)
P: (28.624,24.880,24.789)
C4': (25.538,24.283,22.351)
C2': (23.315,24.826,22.755)
C2: (20.110,23.313,26.068)
N1: (20.252,23.432,27.374)
N3: (21.023,23.369,25.117)
N6: (21.617,23.759,29.208)
N7: (23.890,23.936,27.163)
N9: (23.436,23.699,24.976)
O5': (27.199,24.897,24.037)
O3': (24.726,26.392,21.521)
C2: (18.725,19.185,31.816)
OP1: (24.024,24.098,34.154)
OP2: (23.674,23.697,31.639)
C4: (18.653,19.796,29.541)
O5': (22.449,22.329,33.344)
C3': (22.799,19.478,34.358)
C1': (20.835,19.223,33.099)
O4': (20.571,20.284,34.023)
C5': (22.219,21.927,34.700)
P: (23.135,23.744,33.020)
O2: (18.136,18.795,32.829)
C4': (21.743,20.480,34.834)
C2': (22.345,19.235,32.935)
O2': (22.798,17.965,32.457)
N1: (20.089,19.481,31.827)
N3: (18.046,19.355,30.649)
N4: (17.940,19.938,28.426)
C6: (20.711,19.939,30.694)
C5: (20.044,20.112,29.535)
O3': (22.666,18.304,35.161)
Image (generated by PyMOL):
PyMOL image
show in jmol