Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0873:02060
Extra
PDB:
ATOM 1 O3' G A 872 81.185 123.174 74.270 1.00 36.11 O
ATOM 2 P A A 873 79.978 123.147 73.232 1.00 36.83 P
ATOM 3 OP1 A A 873 78.777 123.687 73.925 1.00 35.20 O
ATOM 4 OP2 A A 873 79.936 121.792 72.643 1.00 38.88 O
ATOM 5 O5' A A 873 80.432 124.162 72.099 1.00 34.44 O
ATOM 6 C5' A A 873 80.152 125.563 72.214 1.00 36.20 C
ATOM 7 C4' A A 873 80.547 126.263 70.942 1.00 36.05 C
ATOM 8 O4' A A 873 81.954 125.985 70.739 1.00 37.14 O
ATOM 9 C3' A A 873 79.836 125.777 69.680 1.00 34.74 C
ATOM 10 O3' A A 873 79.775 126.832 68.718 1.00 31.06 O
ATOM 11 C2' A A 873 80.756 124.662 69.202 1.00 35.01 C
ATOM 12 O2' A A 873 80.639 124.438 67.818 1.00 35.68 O
ATOM 13 C1' A A 873 82.127 125.235 69.557 1.00 36.68 C
ATOM 14 N9 A A 873 83.155 124.234 69.822 1.00 35.86 N
ATOM 15 C8 A A 873 83.090 123.170 70.685 1.00 37.71 C
ATOM 16 N7 A A 873 84.175 122.434 70.697 1.00 38.30 N
ATOM 17 C5 A A 873 85.007 123.057 69.779 1.00 36.70 C
ATOM 18 C6 A A 873 86.293 122.751 69.317 1.00 37.16 C
ATOM 19 N6 A A 873 86.991 121.690 69.723 1.00 36.63 N
ATOM 20 N1 A A 873 86.843 123.578 68.404 1.00 38.13 N
ATOM 21 C2 A A 873 86.132 124.634 67.987 1.00 37.04 C
ATOM 22 N3 A A 873 84.912 125.017 68.339 1.00 35.32 N
ATOM 23 C4 A A 873 84.397 124.175 69.245 1.00 35.38 C
ATOM 24 P G A 874 78.393 127.153 67.956 1.00 30.85 P
ATOM 25 OP1 G A 874 77.249 126.727 68.807 1.00 28.36 O
ATOM 26 OP2 G A 874 78.504 126.646 66.575 1.00 27.65 O
ATOM 27 O5' G A 874 78.363 128.743 67.897 1.00 29.85 O
TER
ATOM 1 O3' G B2059 85.304 119.664 73.112 1.00 36.60 O
ATOM 2 P C B2060 86.487 118.703 72.612 1.00 36.45 P
ATOM 3 OP1 C B2060 87.540 119.562 72.027 1.00 37.98 O
ATOM 4 OP2 C B2060 85.886 117.631 71.793 1.00 38.42 O
ATOM 5 O5' C B2060 87.040 118.057 73.960 1.00 36.39 O
ATOM 6 C5' C B2060 87.739 118.861 74.922 1.00 36.05 C
ATOM 7 C4' C B2060 88.157 118.026 76.099 1.00 36.34 C
ATOM 8 O4' C B2060 86.972 117.520 76.758 1.00 37.47 O
ATOM 9 C3' C B2060 88.955 116.770 75.796 1.00 37.43 C
ATOM 10 O3' C B2060 90.335 117.023 75.556 1.00 38.72 O
ATOM 11 C2' C B2060 88.728 115.954 77.057 1.00 38.38 C
ATOM 12 O2' C B2060 89.505 116.401 78.146 1.00 37.92 O
ATOM 13 C1' C B2060 87.254 116.254 77.337 1.00 39.93 C
ATOM 14 N1 C B2060 86.363 115.234 76.743 1.00 41.58 N
ATOM 15 C2 C B2060 86.125 114.052 77.457 1.00 41.88 C
ATOM 16 O2 C B2060 86.616 113.923 78.584 1.00 43.96 O
ATOM 17 N3 C B2060 85.365 113.085 76.903 1.00 41.32 N
ATOM 18 C4 C B2060 84.835 113.264 75.696 1.00 40.98 C
ATOM 19 N4 C B2060 84.105 112.273 75.182 1.00 40.50 N
ATOM 20 C5 C B2060 85.033 114.466 74.959 1.00 42.02 C
ATOM 21 C6 C B2060 85.796 115.416 75.513 1.00 41.50 C
ATOM 22 P U B2061 91.218 115.935 74.761 1.00 39.98 P
ATOM 23 OP1 U B2061 92.552 116.521 74.523 1.00 39.49 O
ATOM 24 OP2 U B2061 90.440 115.424 73.612 1.00 39.77 O
ATOM 25 O5' U B2061 91.369 114.745 75.806 1.00 38.02 O
TER
ATOM 2 P A A 873 79.978 123.147 73.232 1.00 36.83 P
ATOM 3 OP1 A A 873 78.777 123.687 73.925 1.00 35.20 O
ATOM 4 OP2 A A 873 79.936 121.792 72.643 1.00 38.88 O
ATOM 5 O5' A A 873 80.432 124.162 72.099 1.00 34.44 O
ATOM 6 C5' A A 873 80.152 125.563 72.214 1.00 36.20 C
ATOM 7 C4' A A 873 80.547 126.263 70.942 1.00 36.05 C
ATOM 8 O4' A A 873 81.954 125.985 70.739 1.00 37.14 O
ATOM 9 C3' A A 873 79.836 125.777 69.680 1.00 34.74 C
ATOM 10 O3' A A 873 79.775 126.832 68.718 1.00 31.06 O
ATOM 11 C2' A A 873 80.756 124.662 69.202 1.00 35.01 C
ATOM 12 O2' A A 873 80.639 124.438 67.818 1.00 35.68 O
ATOM 13 C1' A A 873 82.127 125.235 69.557 1.00 36.68 C
ATOM 14 N9 A A 873 83.155 124.234 69.822 1.00 35.86 N
ATOM 15 C8 A A 873 83.090 123.170 70.685 1.00 37.71 C
ATOM 16 N7 A A 873 84.175 122.434 70.697 1.00 38.30 N
ATOM 17 C5 A A 873 85.007 123.057 69.779 1.00 36.70 C
ATOM 18 C6 A A 873 86.293 122.751 69.317 1.00 37.16 C
ATOM 19 N6 A A 873 86.991 121.690 69.723 1.00 36.63 N
ATOM 20 N1 A A 873 86.843 123.578 68.404 1.00 38.13 N
ATOM 21 C2 A A 873 86.132 124.634 67.987 1.00 37.04 C
ATOM 22 N3 A A 873 84.912 125.017 68.339 1.00 35.32 N
ATOM 23 C4 A A 873 84.397 124.175 69.245 1.00 35.38 C
ATOM 24 P G A 874 78.393 127.153 67.956 1.00 30.85 P
ATOM 25 OP1 G A 874 77.249 126.727 68.807 1.00 28.36 O
ATOM 26 OP2 G A 874 78.504 126.646 66.575 1.00 27.65 O
ATOM 27 O5' G A 874 78.363 128.743 67.897 1.00 29.85 O
TER
ATOM 1 O3' G B2059 85.304 119.664 73.112 1.00 36.60 O
ATOM 2 P C B2060 86.487 118.703 72.612 1.00 36.45 P
ATOM 3 OP1 C B2060 87.540 119.562 72.027 1.00 37.98 O
ATOM 4 OP2 C B2060 85.886 117.631 71.793 1.00 38.42 O
ATOM 5 O5' C B2060 87.040 118.057 73.960 1.00 36.39 O
ATOM 6 C5' C B2060 87.739 118.861 74.922 1.00 36.05 C
ATOM 7 C4' C B2060 88.157 118.026 76.099 1.00 36.34 C
ATOM 8 O4' C B2060 86.972 117.520 76.758 1.00 37.47 O
ATOM 9 C3' C B2060 88.955 116.770 75.796 1.00 37.43 C
ATOM 10 O3' C B2060 90.335 117.023 75.556 1.00 38.72 O
ATOM 11 C2' C B2060 88.728 115.954 77.057 1.00 38.38 C
ATOM 12 O2' C B2060 89.505 116.401 78.146 1.00 37.92 O
ATOM 13 C1' C B2060 87.254 116.254 77.337 1.00 39.93 C
ATOM 14 N1 C B2060 86.363 115.234 76.743 1.00 41.58 N
ATOM 15 C2 C B2060 86.125 114.052 77.457 1.00 41.88 C
ATOM 16 O2 C B2060 86.616 113.923 78.584 1.00 43.96 O
ATOM 17 N3 C B2060 85.365 113.085 76.903 1.00 41.32 N
ATOM 18 C4 C B2060 84.835 113.264 75.696 1.00 40.98 C
ATOM 19 N4 C B2060 84.105 112.273 75.182 1.00 40.50 N
ATOM 20 C5 C B2060 85.033 114.466 74.959 1.00 42.02 C
ATOM 21 C6 C B2060 85.796 115.416 75.513 1.00 41.50 C
ATOM 22 P U B2061 91.218 115.935 74.761 1.00 39.98 P
ATOM 23 OP1 U B2061 92.552 116.521 74.523 1.00 39.49 O
ATOM 24 OP2 U B2061 90.440 115.424 73.612 1.00 39.77 O
ATOM 25 O5' U B2061 91.369 114.745 75.806 1.00 38.02 O
TER
Atoms:
OP1: (78.777,123.687,73.925)
OP2: (79.936,121.792,72.643)
C3': (79.836,125.777,69.680)
C1': (82.127,125.235,69.557)
C5': (80.152,125.563,72.214)
O4': (81.954,125.985,70.739)
C8: (83.090,123.170,70.685)
O2': (80.639,124.438,67.818)
C6: (86.293,122.751,69.317)
C5: (85.007,123.057,69.779)
C4: (84.397,124.175,69.245)
P: (79.978,123.147,73.232)
C4': (80.547,126.263,70.942)
C2': (80.756,124.662,69.202)
C2: (86.132,124.634,67.987)
N1: (86.843,123.578,68.404)
N3: (84.912,125.017,68.339)
N6: (86.991,121.690,69.723)
N7: (84.175,122.434,70.697)
N9: (83.155,124.234,69.822)
O5': (80.432,124.162,72.099)
O3': (79.775,126.832,68.718)
OP2: (79.936,121.792,72.643)
C3': (79.836,125.777,69.680)
C1': (82.127,125.235,69.557)
C5': (80.152,125.563,72.214)
O4': (81.954,125.985,70.739)
C8: (83.090,123.170,70.685)
O2': (80.639,124.438,67.818)
C6: (86.293,122.751,69.317)
C5: (85.007,123.057,69.779)
C4: (84.397,124.175,69.245)
P: (79.978,123.147,73.232)
C4': (80.547,126.263,70.942)
C2': (80.756,124.662,69.202)
C2: (86.132,124.634,67.987)
N1: (86.843,123.578,68.404)
N3: (84.912,125.017,68.339)
N6: (86.991,121.690,69.723)
N7: (84.175,122.434,70.697)
N9: (83.155,124.234,69.822)
O5': (80.432,124.162,72.099)
O3': (79.775,126.832,68.718)
C2: (86.125,114.052,77.457)
OP1: (87.540,119.562,72.027)
OP2: (85.886,117.631,71.793)
C4: (84.835,113.264,75.696)
O5': (87.040,118.057,73.960)
C3': (88.955,116.770,75.796)
C1': (87.254,116.254,77.337)
O4': (86.972,117.520,76.758)
C5': (87.739,118.861,74.922)
P: (86.487,118.703,72.612)
O2: (86.616,113.923,78.584)
C4': (88.157,118.026,76.099)
C2': (88.728,115.954,77.057)
O2': (89.505,116.401,78.146)
N1: (86.363,115.234,76.743)
N3: (85.365,113.085,76.903)
N4: (84.105,112.273,75.182)
C6: (85.796,115.416,75.513)
C5: (85.033,114.466,74.959)
O3': (90.335,117.023,75.556)
OP1: (87.540,119.562,72.027)
OP2: (85.886,117.631,71.793)
C4: (84.835,113.264,75.696)
O5': (87.040,118.057,73.960)
C3': (88.955,116.770,75.796)
C1': (87.254,116.254,77.337)
O4': (86.972,117.520,76.758)
C5': (87.739,118.861,74.922)
P: (86.487,118.703,72.612)
O2: (86.616,113.923,78.584)
C4': (88.157,118.026,76.099)
C2': (88.728,115.954,77.057)
O2': (89.505,116.401,78.146)
N1: (86.363,115.234,76.743)
N3: (85.365,113.085,76.903)
N4: (84.105,112.273,75.182)
C6: (85.796,115.416,75.513)
C5: (85.033,114.466,74.959)
O3': (90.335,117.023,75.556)
Image (generated by PyMOL):