ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2A43:A18:A13

Extra

PDB:
ATOM 1 O3' A A 17 -1.521 34.097 16.535 1.00 14.87 O
ATOM 2 P A A 18 -1.361 35.682 16.598 1.00 15.61 P
ATOM 3 OP1 A A 18 0.035 36.054 16.972 1.00 17.46 O
ATOM 4 OP2 A A 18 -2.499 36.265 17.330 1.00 16.21 O
ATOM 5 O5' A A 18 -1.664 36.045 15.088 1.00 16.58 O
ATOM 6 C5' A A 18 -0.728 35.602 14.095 1.00 18.36 C
ATOM 7 C4' A A 18 -1.402 35.652 12.745 1.00 16.87 C
ATOM 8 O4' A A 18 -2.567 34.782 12.742 1.00 17.86 O
ATOM 9 C3' A A 18 -1.997 37.013 12.393 1.00 17.58 C
ATOM 10 O3' A A 18 -0.921 37.824 11.848 1.00 20.92 O
ATOM 11 C2' A A 18 -2.935 36.608 11.243 1.00 18.10 C
ATOM 12 O2' A A 18 -2.207 36.258 10.073 1.00 19.48 O
ATOM 13 C1' A A 18 -3.539 35.368 11.900 1.00 18.28 C
ATOM 14 N9 A A 18 -4.728 35.642 12.696 1.00 16.74 N
ATOM 15 C8 A A 18 -4.939 35.627 14.043 1.00 16.78 C
ATOM 16 N7 A A 18 -6.173 35.918 14.411 1.00 16.58 N
ATOM 17 C5 A A 18 -6.802 36.145 13.205 1.00 16.75 C
ATOM 18 C6 A A 18 -8.127 36.495 12.939 1.00 16.55 C
ATOM 19 N6 A A 18 -9.045 36.631 13.874 1.00 17.37 N
ATOM 20 N1 A A 18 -8.472 36.633 11.648 1.00 18.23 N
ATOM 21 C2 A A 18 -7.511 36.435 10.738 1.00 18.18 C
ATOM 22 N3 A A 18 -6.218 36.125 10.845 1.00 17.94 N
ATOM 23 C4 A A 18 -5.948 35.958 12.151 1.00 17.07 C
ATOM 24 P C A 19 -1.086 39.401 11.958 1.00 21.36 P
ATOM 25 OP1 C A 19 0.167 39.982 11.444 1.00 24.76 O
ATOM 26 OP2 C A 19 -1.513 39.796 13.338 1.00 22.41 O
ATOM 27 O5' C A 19 -2.319 39.729 11.038 1.00 19.23 O
TER

ATOM 1 O3' G B 12 -10.263 35.829 16.891 1.00 16.40 O
ATOM 2 P C B 13 -10.652 34.329 17.200 1.00 18.22 P
ATOM 3 OP1 C B 13 -11.491 33.884 16.102 1.00 19.96 O
ATOM 4 OP2 C B 13 -11.196 34.195 18.603 1.00 19.55 O
ATOM 5 O5' C B 13 -9.267 33.548 17.249 1.00 16.87 O
ATOM 6 C5' C B 13 -8.419 33.608 16.096 1.00 17.21 C
ATOM 7 C4' C B 13 -7.012 33.290 16.485 1.00 16.15 C
ATOM 8 O4' C B 13 -6.644 34.198 17.570 1.00 14.75 O
ATOM 9 C3' C B 13 -6.708 31.907 17.087 1.00 17.01 C
ATOM 10 O3' C B 13 -6.466 31.007 15.991 1.00 18.11 O
ATOM 11 C2' C B 13 -5.378 32.222 17.802 1.00 15.52 C
ATOM 12 O2' C B 13 -4.348 32.462 16.860 1.00 16.37 O
ATOM 13 C1' C B 13 -5.763 33.513 18.455 1.00 14.46 C
ATOM 14 N1 C B 13 -6.326 33.489 19.801 1.00 12.92 N
ATOM 15 C2 C B 13 -5.461 33.180 20.863 1.00 12.42 C
ATOM 16 O2 C B 13 -4.275 32.937 20.569 1.00 13.44 O
ATOM 17 N3 C B 13 -5.877 33.158 22.146 1.00 12.55 N
ATOM 18 C4 C B 13 -7.140 33.448 22.421 1.00 11.78 C
ATOM 19 N4 C B 13 -7.544 33.531 23.702 1.00 14.41 N
ATOM 20 C5 C B 13 -8.095 33.664 21.378 1.00 14.70 C
ATOM 21 C6 C B 13 -7.629 33.640 20.105 1.00 14.45 C
ATOM 22 P U B 14 -6.734 29.446 16.173 1.00 19.81 P
ATOM 23 OP1 U B 14 -6.679 28.852 14.826 1.00 23.37 O
ATOM 24 OP2 U B 14 -7.905 29.203 17.048 1.00 20.68 O
ATOM 25 O5' U B 14 -5.434 28.960 17.003 1.00 18.41 O
TER

Atoms:
OP1: (0.035,36.054,16.972)
OP2: (-2.499,36.265,17.330)
C3': (-1.997,37.013,12.393)
C1': (-3.539,35.368,11.900)
C5': (-0.728,35.602,14.095)
O4': (-2.567,34.782,12.742)
C8: (-4.939,35.627,14.043)
O2': (-2.207,36.258,10.073)
C6: (-8.127,36.495,12.939)
C5: (-6.802,36.145,13.205)
C4: (-5.948,35.958,12.151)
P: (-1.361,35.682,16.598)
C4': (-1.402,35.652,12.745)
C2': (-2.935,36.608,11.243)
C2: (-7.511,36.435,10.738)
N1: (-8.472,36.633,11.648)
N3: (-6.218,36.125,10.845)
N6: (-9.045,36.631,13.874)
N7: (-6.173,35.918,14.411)
N9: (-4.728,35.642,12.696)
O5': (-1.664,36.045,15.088)
O3': (-0.921,37.824,11.848)
C2: (-5.461,33.180,20.863)
OP1: (-11.491,33.884,16.102)
OP2: (-11.196,34.195,18.603)
C4: (-7.140,33.448,22.421)
O5': (-9.267,33.548,17.249)
C3': (-6.708,31.907,17.087)
C1': (-5.763,33.513,18.455)
O4': (-6.644,34.198,17.570)
C5': (-8.419,33.608,16.096)
P: (-10.652,34.329,17.200)
O2: (-4.275,32.937,20.569)
C4': (-7.012,33.290,16.485)
C2': (-5.378,32.222,17.802)
O2': (-4.348,32.462,16.860)
N1: (-6.326,33.489,19.801)
N3: (-5.877,33.158,22.146)
N4: (-7.544,33.531,23.702)
C6: (-7.629,33.640,20.105)
C5: (-8.095,33.664,21.378)
O3': (-6.466,31.007,15.991)
Image (generated by PyMOL):
PyMOL image
show in jmol