ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3HJW:D57:D55

Extra

PDB:
ATOM 1 O3' A A 56 17.210 43.431 10.110 1.00 42.32 O
ATOM 2 P A A 57 18.153 44.394 9.240 1.00 45.06 P
ATOM 3 OP1 A A 57 18.303 43.837 7.878 1.00 45.36 O
ATOM 4 OP2 A A 57 19.337 44.662 10.083 1.00 45.84 O
ATOM 5 O5' A A 57 17.375 45.773 9.071 1.00 48.87 O
ATOM 6 C5' A A 57 15.967 45.904 8.968 1.00 53.77 C
ATOM 7 C4' A A 57 15.519 46.845 10.067 1.00 57.20 C
ATOM 8 O4' A A 57 14.085 46.764 10.261 1.00 58.75 O
ATOM 9 C3' A A 57 16.090 46.516 11.442 1.00 58.78 C
ATOM 10 O3' A A 57 17.443 46.945 11.568 1.00 60.21 O
ATOM 11 C2' A A 57 15.105 47.244 12.359 1.00 59.43 C
ATOM 12 O2' A A 57 15.295 48.650 12.424 1.00 59.58 O
ATOM 13 C1' A A 57 13.794 46.874 11.649 1.00 59.40 C
ATOM 14 N9 A A 57 13.159 45.617 12.071 1.00 59.94 N
ATOM 15 C8 A A 57 11.900 45.217 11.705 1.00 60.26 C
ATOM 16 N7 A A 57 11.541 44.054 12.195 1.00 60.28 N
ATOM 17 C5 A A 57 12.640 43.657 12.942 1.00 59.77 C
ATOM 18 C6 A A 57 12.896 42.509 13.722 1.00 59.45 C
ATOM 19 N6 A A 57 12.011 41.522 13.878 1.00 58.44 N
ATOM 20 N1 A A 57 14.100 42.413 14.341 1.00 59.68 N
ATOM 21 C2 A A 57 14.993 43.401 14.197 1.00 59.26 C
ATOM 22 N3 A A 57 14.857 44.522 13.489 1.00 59.48 N
ATOM 23 C4 A A 57 13.653 44.602 12.879 1.00 59.76 C
TER

ATOM 1 O3' A B 54 10.309 39.450 14.109 1.00 36.71 O
ATOM 2 P C B 55 9.571 39.922 12.764 1.00 41.75 P
ATOM 3 OP1 C B 55 9.842 41.374 12.645 1.00 41.19 O
ATOM 4 OP2 C B 55 8.159 39.448 12.722 1.00 41.88 O
ATOM 5 O5' C B 55 10.426 39.120 11.671 1.00 39.02 O
ATOM 6 C5' C B 55 11.668 39.632 11.188 1.00 35.90 C
ATOM 7 C4' C B 55 11.630 39.716 9.679 1.00 33.85 C
ATOM 8 O4' C B 55 11.195 38.436 9.153 1.00 33.05 O
ATOM 9 C3' C B 55 10.649 40.753 9.138 1.00 34.04 C
ATOM 10 O3' C B 55 11.220 41.455 8.044 1.00 35.64 O
ATOM 11 C2' C B 55 9.468 39.915 8.668 1.00 32.82 C
ATOM 12 O2' C B 55 8.795 40.575 7.622 1.00 32.05 O
ATOM 13 C1' C B 55 10.193 38.660 8.178 1.00 31.87 C
ATOM 14 N1 C B 55 9.338 37.436 7.997 1.00 30.97 N
ATOM 15 C2 C B 55 9.104 36.916 6.705 1.00 30.96 C
ATOM 16 O2 C B 55 9.608 37.463 5.717 1.00 30.97 O
ATOM 17 N3 C B 55 8.325 35.808 6.558 1.00 30.69 N
ATOM 18 C4 C B 55 7.781 35.210 7.628 1.00 30.97 C
ATOM 19 N4 C B 55 7.022 34.126 7.430 1.00 30.07 N
ATOM 20 C5 C B 55 8.000 35.717 8.948 1.00 31.75 C
ATOM 21 C6 C B 55 8.774 36.817 9.082 1.00 32.22 C
ATOM 22 P A B 56 11.475 43.034 8.109 1.00 37.88 P
ATOM 23 OP1 A B 56 10.314 43.678 8.769 1.00 37.72 O
ATOM 24 OP2 A B 56 11.881 43.431 6.738 1.00 39.45 O
ATOM 25 O5' A B 56 12.732 43.201 9.081 1.00 36.72 O
TER

Atoms:
OP1: (18.303,43.837,7.878)
OP2: (19.337,44.662,10.083)
C3': (16.090,46.516,11.442)
C1': (13.794,46.874,11.649)
C5': (15.967,45.904,8.968)
O4': (14.085,46.764,10.261)
C8: (11.900,45.217,11.705)
O2': (15.295,48.650,12.424)
C6: (12.896,42.509,13.722)
C5: (12.640,43.657,12.942)
C4: (13.653,44.602,12.879)
P: (18.153,44.394,9.240)
C4': (15.519,46.845,10.067)
C2': (15.105,47.244,12.359)
C2: (14.993,43.401,14.197)
N1: (14.100,42.413,14.341)
N3: (14.857,44.522,13.489)
N6: (12.011,41.522,13.878)
N7: (11.541,44.054,12.195)
N9: (13.159,45.617,12.071)
O5': (17.375,45.773,9.071)
O3': (17.443,46.945,11.568)
C2: (9.104,36.916,6.705)
OP1: (9.842,41.374,12.645)
OP2: (8.159,39.448,12.722)
C4: (7.781,35.210,7.628)
O5': (10.426,39.120,11.671)
C3': (10.649,40.753,9.138)
C1': (10.193,38.660,8.178)
O4': (11.195,38.436,9.153)
C5': (11.668,39.632,11.188)
P: (9.571,39.922,12.764)
O2: (9.608,37.463,5.717)
C4': (11.630,39.716,9.679)
C2': (9.468,39.915,8.668)
O2': (8.795,40.575,7.622)
N1: (9.338,37.436,7.997)
N3: (8.325,35.808,6.558)
N4: (7.022,34.126,7.430)
C6: (8.774,36.817,9.082)
C5: (8.000,35.717,8.948)
O3': (11.220,41.455,8.044)
Image (generated by PyMOL):
PyMOL image
show in jmol