Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A32:B64
Extra
PDB:
ATOM 1 O3' G A 31 -2.177 -43.723 15.021 1.00 70.31 O
ATOM 2 P A A 32 -3.160 -42.468 15.080 1.00 69.96 P
ATOM 3 OP1 A A 32 -2.483 -41.440 15.908 1.00 69.14 O
ATOM 4 OP2 A A 32 -4.510 -42.952 15.446 1.00 70.38 O
ATOM 5 O5' A A 32 -3.211 -41.957 13.565 1.00 69.47 O
ATOM 6 C5' A A 32 -3.353 -42.880 12.501 1.00 69.83 C
ATOM 7 C4' A A 32 -2.353 -42.595 11.390 1.00 70.21 C
ATOM 8 O4' A A 32 -2.028 -41.183 11.330 1.00 69.52 O
ATOM 9 C3' A A 32 -1.007 -43.294 11.497 1.00 70.86 C
ATOM 10 O3' A A 32 -0.459 -43.397 10.204 1.00 72.97 O
ATOM 11 C2' A A 32 -0.184 -42.274 12.262 1.00 69.68 C
ATOM 12 O2' A A 32 1.204 -42.465 12.073 1.00 69.85 O
ATOM 13 C1' A A 32 -0.648 -40.998 11.566 1.00 69.03 C
ATOM 14 N9 A A 32 -0.468 -39.797 12.372 1.00 67.88 N
ATOM 15 C8 A A 32 -1.162 -39.462 13.498 1.00 67.35 C
ATOM 16 N7 A A 32 -0.791 -38.326 14.034 1.00 66.78 N
ATOM 17 C5 A A 32 0.217 -37.885 13.202 1.00 66.46 C
ATOM 18 C6 A A 32 1.020 -36.731 13.229 1.00 65.93 C
ATOM 19 N6 A A 32 0.910 -35.791 14.171 1.00 65.29 N
ATOM 20 N1 A A 32 1.936 -36.583 12.248 1.00 66.13 N
ATOM 21 C2 A A 32 2.039 -37.533 11.307 1.00 66.57 C
ATOM 22 N3 A A 32 1.339 -38.660 11.181 1.00 67.18 N
ATOM 23 C4 A A 32 0.432 -38.778 12.168 1.00 67.20 C
ATOM 24 P A A 33 -0.639 -44.680 9.276 1.00 75.07 P
ATOM 25 OP1 A A 33 -2.063 -44.786 8.872 1.00 74.93 O
ATOM 26 OP2 A A 33 0.034 -45.811 9.953 1.00 75.67 O
ATOM 27 O5' A A 33 0.248 -44.261 8.011 1.00 75.73 O
TER
ATOM 1 O3' A B 63 -2.589 -33.629 15.623 1.00 60.10 O
ATOM 2 P C B 64 -1.369 -33.664 16.638 1.00 60.56 P
ATOM 3 OP1 C B 64 -0.687 -34.967 16.451 1.00 60.53 O
ATOM 4 OP2 C B 64 -1.902 -33.291 17.962 1.00 61.09 O
ATOM 5 O5' C B 64 -0.377 -32.530 16.115 1.00 61.47 O
ATOM 6 C5' C B 64 0.981 -32.888 15.923 1.00 61.74 C
ATOM 7 C4' C B 64 1.892 -31.706 16.131 1.00 62.08 C
ATOM 8 O4' C B 64 1.469 -30.648 15.245 1.00 62.16 O
ATOM 9 C3' C B 64 1.850 -31.083 17.513 1.00 62.76 C
ATOM 10 O3' C B 64 2.697 -31.805 18.391 1.00 64.09 O
ATOM 11 C2' C B 64 2.401 -29.701 17.193 1.00 62.86 C
ATOM 12 O2' C B 64 3.807 -29.687 17.014 1.00 62.73 O
ATOM 13 C1' C B 64 1.716 -29.402 15.863 1.00 62.47 C
ATOM 14 N1 C B 64 0.434 -28.637 15.973 1.00 62.26 N
ATOM 15 C2 C B 64 0.465 -27.281 16.326 1.00 62.76 C
ATOM 16 O2 C B 64 1.550 -26.732 16.549 1.00 63.07 O
ATOM 17 N3 C B 64 -0.706 -26.598 16.413 1.00 63.19 N
ATOM 18 C4 C B 64 -1.864 -27.214 16.166 1.00 62.93 C
ATOM 19 N4 C B 64 -2.985 -26.498 16.269 1.00 63.30 N
ATOM 20 C5 C B 64 -1.921 -28.594 15.805 1.00 62.51 C
ATOM 21 C6 C B 64 -0.760 -29.255 15.722 1.00 62.15 C
ATOM 22 P U B 65 2.411 -31.870 19.967 1.00 65.68 P
ATOM 23 OP1 U B 65 3.471 -32.705 20.579 1.00 65.06 O
ATOM 24 OP2 U B 65 0.993 -32.226 20.173 1.00 65.34 O
ATOM 25 O5' U B 65 2.597 -30.358 20.448 1.00 67.20 O
TER
ATOM 2 P A A 32 -3.160 -42.468 15.080 1.00 69.96 P
ATOM 3 OP1 A A 32 -2.483 -41.440 15.908 1.00 69.14 O
ATOM 4 OP2 A A 32 -4.510 -42.952 15.446 1.00 70.38 O
ATOM 5 O5' A A 32 -3.211 -41.957 13.565 1.00 69.47 O
ATOM 6 C5' A A 32 -3.353 -42.880 12.501 1.00 69.83 C
ATOM 7 C4' A A 32 -2.353 -42.595 11.390 1.00 70.21 C
ATOM 8 O4' A A 32 -2.028 -41.183 11.330 1.00 69.52 O
ATOM 9 C3' A A 32 -1.007 -43.294 11.497 1.00 70.86 C
ATOM 10 O3' A A 32 -0.459 -43.397 10.204 1.00 72.97 O
ATOM 11 C2' A A 32 -0.184 -42.274 12.262 1.00 69.68 C
ATOM 12 O2' A A 32 1.204 -42.465 12.073 1.00 69.85 O
ATOM 13 C1' A A 32 -0.648 -40.998 11.566 1.00 69.03 C
ATOM 14 N9 A A 32 -0.468 -39.797 12.372 1.00 67.88 N
ATOM 15 C8 A A 32 -1.162 -39.462 13.498 1.00 67.35 C
ATOM 16 N7 A A 32 -0.791 -38.326 14.034 1.00 66.78 N
ATOM 17 C5 A A 32 0.217 -37.885 13.202 1.00 66.46 C
ATOM 18 C6 A A 32 1.020 -36.731 13.229 1.00 65.93 C
ATOM 19 N6 A A 32 0.910 -35.791 14.171 1.00 65.29 N
ATOM 20 N1 A A 32 1.936 -36.583 12.248 1.00 66.13 N
ATOM 21 C2 A A 32 2.039 -37.533 11.307 1.00 66.57 C
ATOM 22 N3 A A 32 1.339 -38.660 11.181 1.00 67.18 N
ATOM 23 C4 A A 32 0.432 -38.778 12.168 1.00 67.20 C
ATOM 24 P A A 33 -0.639 -44.680 9.276 1.00 75.07 P
ATOM 25 OP1 A A 33 -2.063 -44.786 8.872 1.00 74.93 O
ATOM 26 OP2 A A 33 0.034 -45.811 9.953 1.00 75.67 O
ATOM 27 O5' A A 33 0.248 -44.261 8.011 1.00 75.73 O
TER
ATOM 1 O3' A B 63 -2.589 -33.629 15.623 1.00 60.10 O
ATOM 2 P C B 64 -1.369 -33.664 16.638 1.00 60.56 P
ATOM 3 OP1 C B 64 -0.687 -34.967 16.451 1.00 60.53 O
ATOM 4 OP2 C B 64 -1.902 -33.291 17.962 1.00 61.09 O
ATOM 5 O5' C B 64 -0.377 -32.530 16.115 1.00 61.47 O
ATOM 6 C5' C B 64 0.981 -32.888 15.923 1.00 61.74 C
ATOM 7 C4' C B 64 1.892 -31.706 16.131 1.00 62.08 C
ATOM 8 O4' C B 64 1.469 -30.648 15.245 1.00 62.16 O
ATOM 9 C3' C B 64 1.850 -31.083 17.513 1.00 62.76 C
ATOM 10 O3' C B 64 2.697 -31.805 18.391 1.00 64.09 O
ATOM 11 C2' C B 64 2.401 -29.701 17.193 1.00 62.86 C
ATOM 12 O2' C B 64 3.807 -29.687 17.014 1.00 62.73 O
ATOM 13 C1' C B 64 1.716 -29.402 15.863 1.00 62.47 C
ATOM 14 N1 C B 64 0.434 -28.637 15.973 1.00 62.26 N
ATOM 15 C2 C B 64 0.465 -27.281 16.326 1.00 62.76 C
ATOM 16 O2 C B 64 1.550 -26.732 16.549 1.00 63.07 O
ATOM 17 N3 C B 64 -0.706 -26.598 16.413 1.00 63.19 N
ATOM 18 C4 C B 64 -1.864 -27.214 16.166 1.00 62.93 C
ATOM 19 N4 C B 64 -2.985 -26.498 16.269 1.00 63.30 N
ATOM 20 C5 C B 64 -1.921 -28.594 15.805 1.00 62.51 C
ATOM 21 C6 C B 64 -0.760 -29.255 15.722 1.00 62.15 C
ATOM 22 P U B 65 2.411 -31.870 19.967 1.00 65.68 P
ATOM 23 OP1 U B 65 3.471 -32.705 20.579 1.00 65.06 O
ATOM 24 OP2 U B 65 0.993 -32.226 20.173 1.00 65.34 O
ATOM 25 O5' U B 65 2.597 -30.358 20.448 1.00 67.20 O
TER
Atoms:
OP1: (-2.483,-41.440,15.908)
OP2: (-4.510,-42.952,15.446)
C3': (-1.007,-43.294,11.497)
C1': (-0.648,-40.998,11.566)
C5': (-3.353,-42.880,12.501)
O4': (-2.028,-41.183,11.330)
C8: (-1.162,-39.462,13.498)
O2': (1.204,-42.465,12.073)
C6: (1.020,-36.731,13.229)
C5: (0.217,-37.885,13.202)
C4: (0.432,-38.778,12.168)
P: (-3.160,-42.468,15.080)
C4': (-2.353,-42.595,11.390)
C2': (-0.184,-42.274,12.262)
C2: (2.039,-37.533,11.307)
N1: (1.936,-36.583,12.248)
N3: (1.339,-38.660,11.181)
N6: (0.910,-35.791,14.171)
N7: (-0.791,-38.326,14.034)
N9: (-0.468,-39.797,12.372)
O5': (-3.211,-41.957,13.565)
O3': (-0.459,-43.397,10.204)
OP2: (-4.510,-42.952,15.446)
C3': (-1.007,-43.294,11.497)
C1': (-0.648,-40.998,11.566)
C5': (-3.353,-42.880,12.501)
O4': (-2.028,-41.183,11.330)
C8: (-1.162,-39.462,13.498)
O2': (1.204,-42.465,12.073)
C6: (1.020,-36.731,13.229)
C5: (0.217,-37.885,13.202)
C4: (0.432,-38.778,12.168)
P: (-3.160,-42.468,15.080)
C4': (-2.353,-42.595,11.390)
C2': (-0.184,-42.274,12.262)
C2: (2.039,-37.533,11.307)
N1: (1.936,-36.583,12.248)
N3: (1.339,-38.660,11.181)
N6: (0.910,-35.791,14.171)
N7: (-0.791,-38.326,14.034)
N9: (-0.468,-39.797,12.372)
O5': (-3.211,-41.957,13.565)
O3': (-0.459,-43.397,10.204)
C2: (0.465,-27.281,16.326)
OP1: (-0.687,-34.967,16.451)
OP2: (-1.902,-33.291,17.962)
C4: (-1.864,-27.214,16.166)
O5': (-0.377,-32.530,16.115)
C3': (1.850,-31.083,17.513)
C1': (1.716,-29.402,15.863)
O4': (1.469,-30.648,15.245)
C5': (0.981,-32.888,15.923)
P: (-1.369,-33.664,16.638)
O2: (1.550,-26.732,16.549)
C4': (1.892,-31.706,16.131)
C2': (2.401,-29.701,17.193)
O2': (3.807,-29.687,17.014)
N1: (0.434,-28.637,15.973)
N3: (-0.706,-26.598,16.413)
N4: (-2.985,-26.498,16.269)
C6: (-0.760,-29.255,15.722)
C5: (-1.921,-28.594,15.805)
O3': (2.697,-31.805,18.391)
OP1: (-0.687,-34.967,16.451)
OP2: (-1.902,-33.291,17.962)
C4: (-1.864,-27.214,16.166)
O5': (-0.377,-32.530,16.115)
C3': (1.850,-31.083,17.513)
C1': (1.716,-29.402,15.863)
O4': (1.469,-30.648,15.245)
C5': (0.981,-32.888,15.923)
P: (-1.369,-33.664,16.638)
O2: (1.550,-26.732,16.549)
C4': (1.892,-31.706,16.131)
C2': (2.401,-29.701,17.193)
O2': (3.807,-29.687,17.014)
N1: (0.434,-28.637,15.973)
N3: (-0.706,-26.598,16.413)
N4: (-2.985,-26.498,16.269)
C6: (-0.760,-29.255,15.722)
C5: (-1.921,-28.594,15.805)
O3': (2.697,-31.805,18.391)
Image (generated by PyMOL):