Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B31:A65
Extra
PDB:
ATOM 1 O3' G A 30 -5.615 -32.567 23.107 1.00 61.07 O
ATOM 2 P A A 31 -5.629 -32.934 21.559 1.00 60.19 P
ATOM 3 OP1 A A 31 -5.706 -34.409 21.496 1.00 59.89 O
ATOM 4 OP2 A A 31 -4.520 -32.199 20.908 1.00 60.75 O
ATOM 5 O5' A A 31 -7.000 -32.364 20.984 1.00 59.90 O
ATOM 6 C5' A A 31 -7.441 -31.064 21.302 1.00 59.83 C
ATOM 7 C4' A A 31 -8.909 -31.127 21.687 1.00 60.07 C
ATOM 8 O4' A A 31 -9.561 -32.240 21.020 1.00 58.98 O
ATOM 9 C3' A A 31 -9.180 -31.312 23.175 1.00 60.98 C
ATOM 10 O3' A A 31 -10.359 -30.621 23.569 1.00 63.97 O
ATOM 11 C2' A A 31 -9.419 -32.808 23.268 1.00 59.50 C
ATOM 12 O2' A A 31 -10.176 -33.155 24.411 1.00 59.42 O
ATOM 13 C1' A A 31 -10.202 -33.046 21.981 1.00 58.35 C
ATOM 14 N9 A A 31 -10.148 -34.438 21.563 1.00 56.64 N
ATOM 15 C8 A A 31 -9.069 -35.098 21.053 1.00 55.92 C
ATOM 16 N7 A A 31 -9.299 -36.356 20.778 1.00 55.36 N
ATOM 17 C5 A A 31 -10.619 -36.535 21.140 1.00 55.34 C
ATOM 18 C6 A A 31 -11.467 -37.656 21.097 1.00 54.81 C
ATOM 19 N6 A A 31 -11.073 -38.847 20.645 1.00 54.14 N
ATOM 20 N1 A A 31 -12.735 -37.503 21.533 1.00 54.93 N
ATOM 21 C2 A A 31 -13.126 -36.304 21.985 1.00 55.10 C
ATOM 22 N3 A A 31 -12.418 -35.179 22.069 1.00 55.60 N
ATOM 23 C4 A A 31 -11.162 -35.362 21.627 1.00 55.94 C
ATOM 24 P A A 32 -10.347 -29.063 23.919 1.00 66.19 P
ATOM 25 OP1 A A 32 -9.822 -28.342 22.740 1.00 66.06 O
ATOM 26 OP2 A A 32 -9.696 -28.897 25.241 1.00 66.24 O
ATOM 27 O5' A A 32 -11.910 -28.745 24.063 1.00 67.48 O
TER
ATOM 1 O3' A B 64 -9.758 -40.975 16.512 1.00 59.91 O
ATOM 2 P C B 65 -8.739 -40.964 17.746 1.00 59.28 P
ATOM 3 OP1 C B 65 -8.762 -39.631 18.367 1.00 59.07 O
ATOM 4 OP2 C B 65 -7.460 -41.586 17.339 1.00 60.58 O
ATOM 5 O5' C B 65 -9.463 -41.992 18.729 1.00 60.61 O
ATOM 6 C5' C B 65 -10.817 -41.770 19.136 1.00 61.32 C
ATOM 7 C4' C B 65 -11.642 -43.043 19.226 1.00 62.13 C
ATOM 8 O4' C B 65 -12.595 -43.043 18.140 1.00 62.54 O
ATOM 9 C3' C B 65 -10.902 -44.361 19.054 1.00 63.13 C
ATOM 10 O3' C B 65 -10.370 -44.781 20.287 1.00 64.51 O
ATOM 11 C2' C B 65 -12.004 -45.294 18.571 1.00 63.23 C
ATOM 12 O2' C B 65 -12.853 -45.745 19.603 1.00 63.33 O
ATOM 13 C1' C B 65 -12.777 -44.364 17.652 1.00 62.96 C
ATOM 14 N1 C B 65 -12.374 -44.457 16.204 1.00 63.32 N
ATOM 15 C2 C B 65 -12.726 -45.594 15.461 1.00 64.23 C
ATOM 16 O2 C B 65 -13.356 -46.503 16.014 1.00 64.93 O
ATOM 17 N3 C B 65 -12.369 -45.668 14.150 1.00 64.67 N
ATOM 18 C4 C B 65 -11.688 -44.666 13.586 1.00 64.34 C
ATOM 19 N4 C B 65 -11.355 -44.779 12.299 1.00 65.07 N
ATOM 20 C5 C B 65 -11.315 -43.499 14.321 1.00 63.34 C
ATOM 21 C6 C B 65 -11.675 -43.439 15.610 1.00 62.75 C
ATOM 22 P U B 66 -8.985 -45.577 20.319 1.00 66.49 P
ATOM 23 OP1 U B 66 -8.644 -45.758 21.749 1.00 66.20 O
ATOM 24 OP2 U B 66 -8.010 -44.911 19.415 1.00 65.70 O
ATOM 25 O5' U B 66 -9.382 -46.988 19.658 1.00 67.96 O
TER
ATOM 2 P A A 31 -5.629 -32.934 21.559 1.00 60.19 P
ATOM 3 OP1 A A 31 -5.706 -34.409 21.496 1.00 59.89 O
ATOM 4 OP2 A A 31 -4.520 -32.199 20.908 1.00 60.75 O
ATOM 5 O5' A A 31 -7.000 -32.364 20.984 1.00 59.90 O
ATOM 6 C5' A A 31 -7.441 -31.064 21.302 1.00 59.83 C
ATOM 7 C4' A A 31 -8.909 -31.127 21.687 1.00 60.07 C
ATOM 8 O4' A A 31 -9.561 -32.240 21.020 1.00 58.98 O
ATOM 9 C3' A A 31 -9.180 -31.312 23.175 1.00 60.98 C
ATOM 10 O3' A A 31 -10.359 -30.621 23.569 1.00 63.97 O
ATOM 11 C2' A A 31 -9.419 -32.808 23.268 1.00 59.50 C
ATOM 12 O2' A A 31 -10.176 -33.155 24.411 1.00 59.42 O
ATOM 13 C1' A A 31 -10.202 -33.046 21.981 1.00 58.35 C
ATOM 14 N9 A A 31 -10.148 -34.438 21.563 1.00 56.64 N
ATOM 15 C8 A A 31 -9.069 -35.098 21.053 1.00 55.92 C
ATOM 16 N7 A A 31 -9.299 -36.356 20.778 1.00 55.36 N
ATOM 17 C5 A A 31 -10.619 -36.535 21.140 1.00 55.34 C
ATOM 18 C6 A A 31 -11.467 -37.656 21.097 1.00 54.81 C
ATOM 19 N6 A A 31 -11.073 -38.847 20.645 1.00 54.14 N
ATOM 20 N1 A A 31 -12.735 -37.503 21.533 1.00 54.93 N
ATOM 21 C2 A A 31 -13.126 -36.304 21.985 1.00 55.10 C
ATOM 22 N3 A A 31 -12.418 -35.179 22.069 1.00 55.60 N
ATOM 23 C4 A A 31 -11.162 -35.362 21.627 1.00 55.94 C
ATOM 24 P A A 32 -10.347 -29.063 23.919 1.00 66.19 P
ATOM 25 OP1 A A 32 -9.822 -28.342 22.740 1.00 66.06 O
ATOM 26 OP2 A A 32 -9.696 -28.897 25.241 1.00 66.24 O
ATOM 27 O5' A A 32 -11.910 -28.745 24.063 1.00 67.48 O
TER
ATOM 1 O3' A B 64 -9.758 -40.975 16.512 1.00 59.91 O
ATOM 2 P C B 65 -8.739 -40.964 17.746 1.00 59.28 P
ATOM 3 OP1 C B 65 -8.762 -39.631 18.367 1.00 59.07 O
ATOM 4 OP2 C B 65 -7.460 -41.586 17.339 1.00 60.58 O
ATOM 5 O5' C B 65 -9.463 -41.992 18.729 1.00 60.61 O
ATOM 6 C5' C B 65 -10.817 -41.770 19.136 1.00 61.32 C
ATOM 7 C4' C B 65 -11.642 -43.043 19.226 1.00 62.13 C
ATOM 8 O4' C B 65 -12.595 -43.043 18.140 1.00 62.54 O
ATOM 9 C3' C B 65 -10.902 -44.361 19.054 1.00 63.13 C
ATOM 10 O3' C B 65 -10.370 -44.781 20.287 1.00 64.51 O
ATOM 11 C2' C B 65 -12.004 -45.294 18.571 1.00 63.23 C
ATOM 12 O2' C B 65 -12.853 -45.745 19.603 1.00 63.33 O
ATOM 13 C1' C B 65 -12.777 -44.364 17.652 1.00 62.96 C
ATOM 14 N1 C B 65 -12.374 -44.457 16.204 1.00 63.32 N
ATOM 15 C2 C B 65 -12.726 -45.594 15.461 1.00 64.23 C
ATOM 16 O2 C B 65 -13.356 -46.503 16.014 1.00 64.93 O
ATOM 17 N3 C B 65 -12.369 -45.668 14.150 1.00 64.67 N
ATOM 18 C4 C B 65 -11.688 -44.666 13.586 1.00 64.34 C
ATOM 19 N4 C B 65 -11.355 -44.779 12.299 1.00 65.07 N
ATOM 20 C5 C B 65 -11.315 -43.499 14.321 1.00 63.34 C
ATOM 21 C6 C B 65 -11.675 -43.439 15.610 1.00 62.75 C
ATOM 22 P U B 66 -8.985 -45.577 20.319 1.00 66.49 P
ATOM 23 OP1 U B 66 -8.644 -45.758 21.749 1.00 66.20 O
ATOM 24 OP2 U B 66 -8.010 -44.911 19.415 1.00 65.70 O
ATOM 25 O5' U B 66 -9.382 -46.988 19.658 1.00 67.96 O
TER
Atoms:
OP1: (-5.706,-34.409,21.496)
OP2: (-4.520,-32.199,20.908)
C3': (-9.180,-31.312,23.175)
C1': (-10.202,-33.046,21.981)
C5': (-7.441,-31.064,21.302)
O4': (-9.561,-32.240,21.020)
C8: (-9.069,-35.098,21.053)
O2': (-10.176,-33.155,24.411)
C6: (-11.467,-37.656,21.097)
C5: (-10.619,-36.535,21.140)
C4: (-11.162,-35.362,21.627)
P: (-5.629,-32.934,21.559)
C4': (-8.909,-31.127,21.687)
C2': (-9.419,-32.808,23.268)
C2: (-13.126,-36.304,21.985)
N1: (-12.735,-37.503,21.533)
N3: (-12.418,-35.179,22.069)
N6: (-11.073,-38.847,20.645)
N7: (-9.299,-36.356,20.778)
N9: (-10.148,-34.438,21.563)
O5': (-7.000,-32.364,20.984)
O3': (-10.359,-30.621,23.569)
OP2: (-4.520,-32.199,20.908)
C3': (-9.180,-31.312,23.175)
C1': (-10.202,-33.046,21.981)
C5': (-7.441,-31.064,21.302)
O4': (-9.561,-32.240,21.020)
C8: (-9.069,-35.098,21.053)
O2': (-10.176,-33.155,24.411)
C6: (-11.467,-37.656,21.097)
C5: (-10.619,-36.535,21.140)
C4: (-11.162,-35.362,21.627)
P: (-5.629,-32.934,21.559)
C4': (-8.909,-31.127,21.687)
C2': (-9.419,-32.808,23.268)
C2: (-13.126,-36.304,21.985)
N1: (-12.735,-37.503,21.533)
N3: (-12.418,-35.179,22.069)
N6: (-11.073,-38.847,20.645)
N7: (-9.299,-36.356,20.778)
N9: (-10.148,-34.438,21.563)
O5': (-7.000,-32.364,20.984)
O3': (-10.359,-30.621,23.569)
C2: (-12.726,-45.594,15.461)
OP1: (-8.762,-39.631,18.367)
OP2: (-7.460,-41.586,17.339)
C4: (-11.688,-44.666,13.586)
O5': (-9.463,-41.992,18.729)
C3': (-10.902,-44.361,19.054)
C1': (-12.777,-44.364,17.652)
O4': (-12.595,-43.043,18.140)
C5': (-10.817,-41.770,19.136)
P: (-8.739,-40.964,17.746)
O2: (-13.356,-46.503,16.014)
C4': (-11.642,-43.043,19.226)
C2': (-12.004,-45.294,18.571)
O2': (-12.853,-45.745,19.603)
N1: (-12.374,-44.457,16.204)
N3: (-12.369,-45.668,14.150)
N4: (-11.355,-44.779,12.299)
C6: (-11.675,-43.439,15.610)
C5: (-11.315,-43.499,14.321)
O3': (-10.370,-44.781,20.287)
OP1: (-8.762,-39.631,18.367)
OP2: (-7.460,-41.586,17.339)
C4: (-11.688,-44.666,13.586)
O5': (-9.463,-41.992,18.729)
C3': (-10.902,-44.361,19.054)
C1': (-12.777,-44.364,17.652)
O4': (-12.595,-43.043,18.140)
C5': (-10.817,-41.770,19.136)
P: (-8.739,-40.964,17.746)
O2: (-13.356,-46.503,16.014)
C4': (-11.642,-43.043,19.226)
C2': (-12.004,-45.294,18.571)
O2': (-12.853,-45.745,19.603)
N1: (-12.374,-44.457,16.204)
N3: (-12.369,-45.668,14.150)
N4: (-11.355,-44.779,12.299)
C6: (-11.675,-43.439,15.610)
C5: (-11.315,-43.499,14.321)
O3': (-10.370,-44.781,20.287)
Image (generated by PyMOL):