Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21779:21778
Extra
PDB:
ATOM 1 O3' C A1778 -68.443 -12.296 104.668 1.00 97.80 O
ATOM 2 P A A1779 -67.294 -13.207 105.343 1.00106.28 P
ATOM 3 OP1 A A1779 -66.733 -12.431 106.494 1.00105.87 O
ATOM 4 OP2 A A1779 -66.378 -13.642 104.261 1.00105.94 O
ATOM 5 O5' A A1779 -68.114 -14.458 105.880 1.00107.42 O
ATOM 6 C5' A A1779 -68.851 -14.383 107.092 1.00107.94 C
ATOM 7 C4' A A1779 -69.395 -15.729 107.479 1.00109.02 C
ATOM 8 O4' A A1779 -70.090 -16.296 106.352 1.00109.42 O
ATOM 9 C3' A A1779 -68.359 -16.772 107.863 1.00109.26 C
ATOM 10 O3' A A1779 -67.992 -16.682 109.229 1.00109.36 O
ATOM 11 C2' A A1779 -69.038 -18.084 107.504 1.00110.26 C
ATOM 12 O2' A A1779 -69.922 -18.480 108.547 1.00111.12 O
ATOM 13 C1' A A1779 -69.882 -17.680 106.295 1.00110.14 C
ATOM 14 N9 A A1779 -69.259 -18.000 104.988 1.00109.80 N
ATOM 15 C8 A A1779 -68.392 -17.224 104.252 1.00108.82 C
ATOM 16 N7 A A1779 -68.064 -17.731 103.087 1.00108.76 N
ATOM 17 C5 A A1779 -68.790 -18.913 103.021 1.00109.78 C
ATOM 18 C6 A A1779 -68.889 -19.925 102.034 1.00110.28 C
ATOM 19 N6 A A1779 -68.226 -19.907 100.869 1.00109.78 N
ATOM 20 N1 A A1779 -69.708 -20.982 102.290 1.00111.36 N
ATOM 21 C2 A A1779 -70.377 -21.016 103.450 1.00111.89 C
ATOM 22 N3 A A1779 -70.369 -20.133 104.446 1.00111.50 N
ATOM 23 C4 A A1779 -69.547 -19.088 104.176 1.00110.43 C
ATOM 24 P U A1780 -66.834 -17.615 109.831 1.00122.77 P
ATOM 25 OP1 U A1780 -66.012 -16.763 110.719 1.00122.14 O
ATOM 26 OP2 U A1780 -66.177 -18.284 108.683 1.00122.64 O
ATOM 27 O5' U A1780 -67.648 -18.689 110.711 1.00123.97 O
TER
ATOM 1 O3' U B1777 -67.510 -16.606 99.946 1.00104.39 O
ATOM 2 P C B1778 -68.557 -15.539 99.358 1.00 98.75 P
ATOM 3 OP1 C B1778 -69.912 -16.131 99.504 1.00 99.71 O
ATOM 4 OP2 C B1778 -68.079 -15.172 98.009 1.00 98.15 O
ATOM 5 O5' C B1778 -68.397 -14.289 100.335 1.00 98.13 O
ATOM 6 C5' C B1778 -69.119 -14.211 101.566 1.00 98.59 C
ATOM 7 C4' C B1778 -68.657 -13.044 102.403 1.00 97.89 C
ATOM 8 O4' C B1778 -68.869 -11.815 101.670 1.00 97.20 O
ATOM 9 C3' C B1778 -69.364 -12.862 103.734 1.00 98.32 C
ATOM 10 O3' C B1778 -68.443 -12.296 104.668 1.00 97.80 O
ATOM 11 C2' C B1778 -70.436 -11.829 103.398 1.00 98.17 C
ATOM 12 O2' C B1778 -70.909 -11.099 104.506 1.00 98.18 O
ATOM 13 C1' C B1778 -69.687 -10.939 102.417 1.00 97.21 C
ATOM 14 N1 C B1778 -70.544 -10.188 101.452 1.00 97.03 N
ATOM 15 C2 C B1778 -71.182 -10.916 100.434 1.00 97.53 C
ATOM 16 O2 C B1778 -71.061 -12.147 100.435 1.00 98.13 O
ATOM 17 N3 C B1778 -71.943 -10.313 99.477 1.00 97.41 N
ATOM 18 C4 C B1778 -72.066 -9.000 99.476 1.00 96.80 C
ATOM 19 N4 C B1778 -72.832 -8.478 98.511 1.00 96.75 N
ATOM 20 C5 C B1778 -71.409 -8.218 100.486 1.00 96.27 C
ATOM 21 C6 C B1778 -70.656 -8.820 101.435 1.00 96.39 C
ATOM 22 P A B1779 -67.294 -13.207 105.343 1.00106.28 P
ATOM 23 OP1 A B1779 -66.733 -12.431 106.494 1.00105.87 O
ATOM 24 OP2 A B1779 -66.378 -13.642 104.261 1.00105.94 O
ATOM 25 O5' A B1779 -68.114 -14.458 105.880 1.00107.42 O
TER
ATOM 2 P A A1779 -67.294 -13.207 105.343 1.00106.28 P
ATOM 3 OP1 A A1779 -66.733 -12.431 106.494 1.00105.87 O
ATOM 4 OP2 A A1779 -66.378 -13.642 104.261 1.00105.94 O
ATOM 5 O5' A A1779 -68.114 -14.458 105.880 1.00107.42 O
ATOM 6 C5' A A1779 -68.851 -14.383 107.092 1.00107.94 C
ATOM 7 C4' A A1779 -69.395 -15.729 107.479 1.00109.02 C
ATOM 8 O4' A A1779 -70.090 -16.296 106.352 1.00109.42 O
ATOM 9 C3' A A1779 -68.359 -16.772 107.863 1.00109.26 C
ATOM 10 O3' A A1779 -67.992 -16.682 109.229 1.00109.36 O
ATOM 11 C2' A A1779 -69.038 -18.084 107.504 1.00110.26 C
ATOM 12 O2' A A1779 -69.922 -18.480 108.547 1.00111.12 O
ATOM 13 C1' A A1779 -69.882 -17.680 106.295 1.00110.14 C
ATOM 14 N9 A A1779 -69.259 -18.000 104.988 1.00109.80 N
ATOM 15 C8 A A1779 -68.392 -17.224 104.252 1.00108.82 C
ATOM 16 N7 A A1779 -68.064 -17.731 103.087 1.00108.76 N
ATOM 17 C5 A A1779 -68.790 -18.913 103.021 1.00109.78 C
ATOM 18 C6 A A1779 -68.889 -19.925 102.034 1.00110.28 C
ATOM 19 N6 A A1779 -68.226 -19.907 100.869 1.00109.78 N
ATOM 20 N1 A A1779 -69.708 -20.982 102.290 1.00111.36 N
ATOM 21 C2 A A1779 -70.377 -21.016 103.450 1.00111.89 C
ATOM 22 N3 A A1779 -70.369 -20.133 104.446 1.00111.50 N
ATOM 23 C4 A A1779 -69.547 -19.088 104.176 1.00110.43 C
ATOM 24 P U A1780 -66.834 -17.615 109.831 1.00122.77 P
ATOM 25 OP1 U A1780 -66.012 -16.763 110.719 1.00122.14 O
ATOM 26 OP2 U A1780 -66.177 -18.284 108.683 1.00122.64 O
ATOM 27 O5' U A1780 -67.648 -18.689 110.711 1.00123.97 O
TER
ATOM 1 O3' U B1777 -67.510 -16.606 99.946 1.00104.39 O
ATOM 2 P C B1778 -68.557 -15.539 99.358 1.00 98.75 P
ATOM 3 OP1 C B1778 -69.912 -16.131 99.504 1.00 99.71 O
ATOM 4 OP2 C B1778 -68.079 -15.172 98.009 1.00 98.15 O
ATOM 5 O5' C B1778 -68.397 -14.289 100.335 1.00 98.13 O
ATOM 6 C5' C B1778 -69.119 -14.211 101.566 1.00 98.59 C
ATOM 7 C4' C B1778 -68.657 -13.044 102.403 1.00 97.89 C
ATOM 8 O4' C B1778 -68.869 -11.815 101.670 1.00 97.20 O
ATOM 9 C3' C B1778 -69.364 -12.862 103.734 1.00 98.32 C
ATOM 10 O3' C B1778 -68.443 -12.296 104.668 1.00 97.80 O
ATOM 11 C2' C B1778 -70.436 -11.829 103.398 1.00 98.17 C
ATOM 12 O2' C B1778 -70.909 -11.099 104.506 1.00 98.18 O
ATOM 13 C1' C B1778 -69.687 -10.939 102.417 1.00 97.21 C
ATOM 14 N1 C B1778 -70.544 -10.188 101.452 1.00 97.03 N
ATOM 15 C2 C B1778 -71.182 -10.916 100.434 1.00 97.53 C
ATOM 16 O2 C B1778 -71.061 -12.147 100.435 1.00 98.13 O
ATOM 17 N3 C B1778 -71.943 -10.313 99.477 1.00 97.41 N
ATOM 18 C4 C B1778 -72.066 -9.000 99.476 1.00 96.80 C
ATOM 19 N4 C B1778 -72.832 -8.478 98.511 1.00 96.75 N
ATOM 20 C5 C B1778 -71.409 -8.218 100.486 1.00 96.27 C
ATOM 21 C6 C B1778 -70.656 -8.820 101.435 1.00 96.39 C
ATOM 22 P A B1779 -67.294 -13.207 105.343 1.00106.28 P
ATOM 23 OP1 A B1779 -66.733 -12.431 106.494 1.00105.87 O
ATOM 24 OP2 A B1779 -66.378 -13.642 104.261 1.00105.94 O
ATOM 25 O5' A B1779 -68.114 -14.458 105.880 1.00107.42 O
TER
Atoms:
OP1: (-66.733,-12.431,106.494)
OP2: (-66.378,-13.642,104.261)
C3': (-68.359,-16.772,107.863)
C1': (-69.882,-17.680,106.295)
C5': (-68.851,-14.383,107.092)
O4': (-70.090,-16.296,106.352)
C8: (-68.392,-17.224,104.252)
O2': (-69.922,-18.480,108.547)
C6: (-68.889,-19.925,102.034)
C5: (-68.790,-18.913,103.021)
C4: (-69.547,-19.088,104.176)
P: (-67.294,-13.207,105.343)
C4': (-69.395,-15.729,107.479)
C2': (-69.038,-18.084,107.504)
C2: (-70.377,-21.016,103.450)
N1: (-69.708,-20.982,102.290)
N3: (-70.369,-20.133,104.446)
N6: (-68.226,-19.907,100.869)
N7: (-68.064,-17.731,103.087)
N9: (-69.259,-18.000,104.988)
O5': (-68.114,-14.458,105.880)
O3': (-67.992,-16.682,109.229)
OP2: (-66.378,-13.642,104.261)
C3': (-68.359,-16.772,107.863)
C1': (-69.882,-17.680,106.295)
C5': (-68.851,-14.383,107.092)
O4': (-70.090,-16.296,106.352)
C8: (-68.392,-17.224,104.252)
O2': (-69.922,-18.480,108.547)
C6: (-68.889,-19.925,102.034)
C5: (-68.790,-18.913,103.021)
C4: (-69.547,-19.088,104.176)
P: (-67.294,-13.207,105.343)
C4': (-69.395,-15.729,107.479)
C2': (-69.038,-18.084,107.504)
C2: (-70.377,-21.016,103.450)
N1: (-69.708,-20.982,102.290)
N3: (-70.369,-20.133,104.446)
N6: (-68.226,-19.907,100.869)
N7: (-68.064,-17.731,103.087)
N9: (-69.259,-18.000,104.988)
O5': (-68.114,-14.458,105.880)
O3': (-67.992,-16.682,109.229)
C2: (-71.182,-10.916,100.434)
OP1: (-69.912,-16.131,99.504)
OP2: (-68.079,-15.172,98.009)
C4: (-72.066,-9.000,99.476)
O5': (-68.397,-14.289,100.335)
C3': (-69.364,-12.862,103.734)
C1': (-69.687,-10.939,102.417)
O4': (-68.869,-11.815,101.670)
C5': (-69.119,-14.211,101.566)
P: (-68.557,-15.539,99.358)
O2: (-71.061,-12.147,100.435)
C4': (-68.657,-13.044,102.403)
C2': (-70.436,-11.829,103.398)
O2': (-70.909,-11.099,104.506)
N1: (-70.544,-10.188,101.452)
N3: (-71.943,-10.313,99.477)
N4: (-72.832,-8.478,98.511)
C6: (-70.656,-8.820,101.435)
C5: (-71.409,-8.218,100.486)
O3': (-68.443,-12.296,104.668)
OP1: (-69.912,-16.131,99.504)
OP2: (-68.079,-15.172,98.009)
C4: (-72.066,-9.000,99.476)
O5': (-68.397,-14.289,100.335)
C3': (-69.364,-12.862,103.734)
C1': (-69.687,-10.939,102.417)
O4': (-68.869,-11.815,101.670)
C5': (-69.119,-14.211,101.566)
P: (-68.557,-15.539,99.358)
O2: (-71.061,-12.147,100.435)
C4': (-68.657,-13.044,102.403)
C2': (-70.436,-11.829,103.398)
O2': (-70.909,-11.099,104.506)
N1: (-70.544,-10.188,101.452)
N3: (-71.943,-10.313,99.477)
N4: (-72.832,-8.478,98.511)
C6: (-70.656,-8.820,101.435)
C5: (-71.409,-8.218,100.486)
O3': (-68.443,-12.296,104.668)
Image (generated by PyMOL):