Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12734:12200
Extra
PDB:
ATOM 1 O3' U A2733 36.902 25.050 71.431 1.00 47.17 O
ATOM 2 P A A2734 36.668 26.243 70.362 1.00 43.83 P
ATOM 3 OP1 A A2734 36.900 27.515 71.109 1.00 44.14 O
ATOM 4 OP2 A A2734 35.350 26.036 69.721 1.00 43.81 O
ATOM 5 O5' A A2734 37.842 26.012 69.305 1.00 43.70 O
ATOM 6 C5' A A2734 39.187 26.072 69.710 1.00 43.69 C
ATOM 7 C4' A A2734 40.097 26.144 68.538 1.00 43.65 C
ATOM 8 O4' A A2734 39.909 24.981 67.725 1.00 43.38 O
ATOM 9 C3' A A2734 39.865 27.305 67.606 1.00 43.89 C
ATOM 10 O3' A A2734 40.541 28.472 68.042 1.00 44.15 O
ATOM 11 C2' A A2734 40.370 26.772 66.272 1.00 43.73 C
ATOM 12 O2' A A2734 41.765 26.946 66.135 1.00 43.74 O
ATOM 13 C1' A A2734 40.075 25.295 66.378 1.00 43.41 C
ATOM 14 N9 A A2734 38.845 24.976 65.686 1.00 43.37 N
ATOM 15 C8 A A2734 37.590 25.080 66.175 1.00 43.44 C
ATOM 16 N7 A A2734 36.698 24.772 65.294 1.00 43.40 N
ATOM 17 C5 A A2734 37.431 24.466 64.157 1.00 43.30 C
ATOM 18 C6 A A2734 37.085 24.038 62.865 1.00 43.23 C
ATOM 19 N6 A A2734 35.826 23.863 62.462 1.00 43.25 N
ATOM 20 N1 A A2734 38.093 23.820 61.969 1.00 43.16 N
ATOM 21 C2 A A2734 39.354 24.007 62.355 1.00 43.15 C
ATOM 22 N3 A A2734 39.784 24.373 63.539 1.00 43.21 N
ATOM 23 C4 A A2734 38.771 24.610 64.385 1.00 43.29 C
ATOM 24 P C A2735 40.193 29.934 67.455 1.00 50.23 P
ATOM 25 OP1 C A2735 39.202 30.545 68.353 1.00 50.43 O
ATOM 26 OP2 C A2735 39.870 29.807 66.004 1.00 50.18 O
ATOM 27 O5' C A2735 41.528 30.687 67.609 1.00 50.39 O
TER
ATOM 1 O3' C B2199 33.075 30.212 58.837 1.00 36.96 O
ATOM 2 P G B2200 31.809 30.069 59.851 1.00 41.76 P
ATOM 3 OP1 G B2200 30.647 30.759 59.194 1.00 42.04 O
ATOM 4 OP2 G B2200 32.252 30.526 61.189 1.00 41.81 O
ATOM 5 O5' G B2200 31.570 28.500 59.921 1.00 41.40 O
ATOM 6 C5' G B2200 31.180 27.765 58.795 1.00 41.29 C
ATOM 7 C4' G B2200 32.306 26.950 58.258 1.00 41.05 C
ATOM 8 O4' G B2200 33.558 27.489 58.715 1.00 41.08 O
ATOM 9 C3' G B2200 32.327 25.467 58.649 1.00 40.71 C
ATOM 10 O3' G B2200 32.856 24.748 57.550 1.00 40.57 O
ATOM 11 C2' G B2200 33.367 25.428 59.728 1.00 40.60 C
ATOM 12 O2' G B2200 33.960 24.175 59.888 1.00 40.29 O
ATOM 13 C1' G B2200 34.349 26.415 59.154 1.00 40.78 C
ATOM 14 N9 G B2200 35.326 26.884 60.097 1.00 40.80 N
ATOM 15 C8 G B2200 34.971 27.440 61.262 1.00 40.92 C
ATOM 16 N7 G B2200 35.995 27.762 61.943 1.00 40.93 N
ATOM 17 C5 G B2200 37.088 27.360 61.185 1.00 40.80 C
ATOM 18 C6 G B2200 38.458 27.478 61.485 1.00 40.77 C
ATOM 19 O6 G B2200 38.905 27.961 62.529 1.00 40.85 O
ATOM 20 N1 G B2200 39.258 26.990 60.462 1.00 40.65 N
ATOM 21 C2 G B2200 38.800 26.459 59.297 1.00 40.58 C
ATOM 22 N2 G B2200 39.746 26.020 58.444 1.00 40.48 N
ATOM 23 N3 G B2200 37.504 26.349 59.015 1.00 40.62 N
ATOM 24 C4 G B2200 36.696 26.810 60.007 1.00 40.72 C
ATOM 25 P G B2201 32.328 23.300 57.170 1.00 37.01 P
ATOM 26 OP1 G B2201 30.850 23.339 57.218 1.00 37.12 O
ATOM 27 OP2 G B2201 33.059 22.354 58.036 1.00 36.74 O
ATOM 28 O5' G B2201 32.809 23.172 55.667 1.00 37.04 O
TER
ATOM 2 P A A2734 36.668 26.243 70.362 1.00 43.83 P
ATOM 3 OP1 A A2734 36.900 27.515 71.109 1.00 44.14 O
ATOM 4 OP2 A A2734 35.350 26.036 69.721 1.00 43.81 O
ATOM 5 O5' A A2734 37.842 26.012 69.305 1.00 43.70 O
ATOM 6 C5' A A2734 39.187 26.072 69.710 1.00 43.69 C
ATOM 7 C4' A A2734 40.097 26.144 68.538 1.00 43.65 C
ATOM 8 O4' A A2734 39.909 24.981 67.725 1.00 43.38 O
ATOM 9 C3' A A2734 39.865 27.305 67.606 1.00 43.89 C
ATOM 10 O3' A A2734 40.541 28.472 68.042 1.00 44.15 O
ATOM 11 C2' A A2734 40.370 26.772 66.272 1.00 43.73 C
ATOM 12 O2' A A2734 41.765 26.946 66.135 1.00 43.74 O
ATOM 13 C1' A A2734 40.075 25.295 66.378 1.00 43.41 C
ATOM 14 N9 A A2734 38.845 24.976 65.686 1.00 43.37 N
ATOM 15 C8 A A2734 37.590 25.080 66.175 1.00 43.44 C
ATOM 16 N7 A A2734 36.698 24.772 65.294 1.00 43.40 N
ATOM 17 C5 A A2734 37.431 24.466 64.157 1.00 43.30 C
ATOM 18 C6 A A2734 37.085 24.038 62.865 1.00 43.23 C
ATOM 19 N6 A A2734 35.826 23.863 62.462 1.00 43.25 N
ATOM 20 N1 A A2734 38.093 23.820 61.969 1.00 43.16 N
ATOM 21 C2 A A2734 39.354 24.007 62.355 1.00 43.15 C
ATOM 22 N3 A A2734 39.784 24.373 63.539 1.00 43.21 N
ATOM 23 C4 A A2734 38.771 24.610 64.385 1.00 43.29 C
ATOM 24 P C A2735 40.193 29.934 67.455 1.00 50.23 P
ATOM 25 OP1 C A2735 39.202 30.545 68.353 1.00 50.43 O
ATOM 26 OP2 C A2735 39.870 29.807 66.004 1.00 50.18 O
ATOM 27 O5' C A2735 41.528 30.687 67.609 1.00 50.39 O
TER
ATOM 1 O3' C B2199 33.075 30.212 58.837 1.00 36.96 O
ATOM 2 P G B2200 31.809 30.069 59.851 1.00 41.76 P
ATOM 3 OP1 G B2200 30.647 30.759 59.194 1.00 42.04 O
ATOM 4 OP2 G B2200 32.252 30.526 61.189 1.00 41.81 O
ATOM 5 O5' G B2200 31.570 28.500 59.921 1.00 41.40 O
ATOM 6 C5' G B2200 31.180 27.765 58.795 1.00 41.29 C
ATOM 7 C4' G B2200 32.306 26.950 58.258 1.00 41.05 C
ATOM 8 O4' G B2200 33.558 27.489 58.715 1.00 41.08 O
ATOM 9 C3' G B2200 32.327 25.467 58.649 1.00 40.71 C
ATOM 10 O3' G B2200 32.856 24.748 57.550 1.00 40.57 O
ATOM 11 C2' G B2200 33.367 25.428 59.728 1.00 40.60 C
ATOM 12 O2' G B2200 33.960 24.175 59.888 1.00 40.29 O
ATOM 13 C1' G B2200 34.349 26.415 59.154 1.00 40.78 C
ATOM 14 N9 G B2200 35.326 26.884 60.097 1.00 40.80 N
ATOM 15 C8 G B2200 34.971 27.440 61.262 1.00 40.92 C
ATOM 16 N7 G B2200 35.995 27.762 61.943 1.00 40.93 N
ATOM 17 C5 G B2200 37.088 27.360 61.185 1.00 40.80 C
ATOM 18 C6 G B2200 38.458 27.478 61.485 1.00 40.77 C
ATOM 19 O6 G B2200 38.905 27.961 62.529 1.00 40.85 O
ATOM 20 N1 G B2200 39.258 26.990 60.462 1.00 40.65 N
ATOM 21 C2 G B2200 38.800 26.459 59.297 1.00 40.58 C
ATOM 22 N2 G B2200 39.746 26.020 58.444 1.00 40.48 N
ATOM 23 N3 G B2200 37.504 26.349 59.015 1.00 40.62 N
ATOM 24 C4 G B2200 36.696 26.810 60.007 1.00 40.72 C
ATOM 25 P G B2201 32.328 23.300 57.170 1.00 37.01 P
ATOM 26 OP1 G B2201 30.850 23.339 57.218 1.00 37.12 O
ATOM 27 OP2 G B2201 33.059 22.354 58.036 1.00 36.74 O
ATOM 28 O5' G B2201 32.809 23.172 55.667 1.00 37.04 O
TER
Atoms:
OP1: (36.900,27.515,71.109)
OP2: (35.350,26.036,69.721)
C3': (39.865,27.305,67.606)
C1': (40.075,25.295,66.378)
C5': (39.187,26.072,69.710)
O4': (39.909,24.981,67.725)
C8: (37.590,25.080,66.175)
O2': (41.765,26.946,66.135)
C6: (37.085,24.038,62.865)
C5: (37.431,24.466,64.157)
C4: (38.771,24.610,64.385)
P: (36.668,26.243,70.362)
C4': (40.097,26.144,68.538)
C2': (40.370,26.772,66.272)
C2: (39.354,24.007,62.355)
N1: (38.093,23.820,61.969)
N3: (39.784,24.373,63.539)
N6: (35.826,23.863,62.462)
N7: (36.698,24.772,65.294)
N9: (38.845,24.976,65.686)
O5': (37.842,26.012,69.305)
O3': (40.541,28.472,68.042)
OP2: (35.350,26.036,69.721)
C3': (39.865,27.305,67.606)
C1': (40.075,25.295,66.378)
C5': (39.187,26.072,69.710)
O4': (39.909,24.981,67.725)
C8: (37.590,25.080,66.175)
O2': (41.765,26.946,66.135)
C6: (37.085,24.038,62.865)
C5: (37.431,24.466,64.157)
C4: (38.771,24.610,64.385)
P: (36.668,26.243,70.362)
C4': (40.097,26.144,68.538)
C2': (40.370,26.772,66.272)
C2: (39.354,24.007,62.355)
N1: (38.093,23.820,61.969)
N3: (39.784,24.373,63.539)
N6: (35.826,23.863,62.462)
N7: (36.698,24.772,65.294)
N9: (38.845,24.976,65.686)
O5': (37.842,26.012,69.305)
O3': (40.541,28.472,68.042)
OP1: (30.647,30.759,59.194)
OP2: (32.252,30.526,61.189)
C3': (32.327,25.467,58.649)
C1': (34.349,26.415,59.154)
C5': (31.180,27.765,58.795)
O6: (38.905,27.961,62.529)
O4': (33.558,27.489,58.715)
C8: (34.971,27.440,61.262)
C2: (38.800,26.459,59.297)
C6: (38.458,27.478,61.485)
C5: (37.088,27.360,61.185)
C4: (36.696,26.810,60.007)
P: (31.809,30.069,59.851)
C4': (32.306,26.950,58.258)
C2': (33.367,25.428,59.728)
O2': (33.960,24.175,59.888)
N1: (39.258,26.990,60.462)
N2: (39.746,26.020,58.444)
N3: (37.504,26.349,59.015)
N7: (35.995,27.762,61.943)
N9: (35.326,26.884,60.097)
O5': (31.570,28.500,59.921)
O3': (32.856,24.748,57.550)
OP2: (32.252,30.526,61.189)
C3': (32.327,25.467,58.649)
C1': (34.349,26.415,59.154)
C5': (31.180,27.765,58.795)
O6: (38.905,27.961,62.529)
O4': (33.558,27.489,58.715)
C8: (34.971,27.440,61.262)
C2: (38.800,26.459,59.297)
C6: (38.458,27.478,61.485)
C5: (37.088,27.360,61.185)
C4: (36.696,26.810,60.007)
P: (31.809,30.069,59.851)
C4': (32.306,26.950,58.258)
C2': (33.367,25.428,59.728)
O2': (33.960,24.175,59.888)
N1: (39.258,26.990,60.462)
N2: (39.746,26.020,58.444)
N3: (37.504,26.349,59.015)
N7: (35.995,27.762,61.943)
N9: (35.326,26.884,60.097)
O5': (31.570,28.500,59.921)
O3': (32.856,24.748,57.550)
Image (generated by PyMOL):