ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUX:O10:O14

Extra

PDB:
ATOM 1 O3' G A 9 -89.054 -6.054 45.769 1.00 84.18 O
ATOM 2 P A A 10 -88.308 -5.950 44.358 1.00 62.15 P
ATOM 3 OP1 A A 10 -87.632 -7.228 44.035 1.00 62.13 O
ATOM 4 OP2 A A 10 -87.537 -4.698 44.381 1.00 63.10 O
ATOM 5 O5' A A 10 -89.532 -5.787 43.353 1.00 63.45 O
ATOM 6 C5' A A 10 -90.382 -6.897 43.111 1.00 64.52 C
ATOM 7 C4' A A 10 -91.538 -6.502 42.217 1.00 71.32 C
ATOM 8 O4' A A 10 -92.380 -5.511 42.852 1.00 72.30 O
ATOM 9 C3' A A 10 -91.127 -5.858 40.902 1.00 60.46 C
ATOM 10 O3' A A 10 -90.656 -6.852 40.004 1.00 54.43 O
ATOM 11 C2' A A 10 -92.450 -5.226 40.508 1.00 50.18 C
ATOM 12 O2' A A 10 -93.358 -6.143 39.927 1.00 64.98 O
ATOM 13 C1' A A 10 -92.948 -4.683 41.851 1.00 68.01 C
ATOM 14 N9 A A 10 -92.542 -3.292 42.065 1.00 62.77 N
ATOM 15 C8 A A 10 -91.289 -2.841 42.404 1.00 64.17 C
ATOM 16 N7 A A 10 -91.181 -1.546 42.517 1.00 55.37 N
ATOM 17 C5 A A 10 -92.459 -1.108 42.225 1.00 49.29 C
ATOM 18 C6 A A 10 -93.004 0.196 42.176 1.00 67.19 C
ATOM 19 N6 A A 10 -92.249 1.266 42.437 1.00 60.39 N
ATOM 20 N1 A A 10 -94.324 0.337 41.854 1.00 59.98 N
ATOM 21 C2 A A 10 -95.039 -0.788 41.608 1.00 71.14 C
ATOM 22 N3 A A 10 -94.635 -2.075 41.622 1.00 69.21 N
ATOM 23 C4 A A 10 -93.320 -2.166 41.946 1.00 57.62 C
ATOM 24 P U A 11 -89.405 -6.649 39.032 1.00 60.47 P
ATOM 25 OP1 U A 11 -89.036 -7.997 38.532 1.00 45.57 O
ATOM 26 OP2 U A 11 -88.393 -5.727 39.605 1.00 49.74 O
ATOM 27 O5' U A 11 -90.151 -5.953 37.824 1.00 45.61 O
TER

ATOM 1 O3' U B 13 -102.181 -1.460 36.773 1.00103.88 O
ATOM 2 P G B 14 -102.035 -2.271 38.143 1.00100.37 P
ATOM 3 OP1 G B 14 -101.049 -3.362 37.919 1.00 71.95 O
ATOM 4 OP2 G B 14 -103.406 -2.569 38.615 1.00 99.46 O
ATOM 5 O5' G B 14 -101.433 -1.196 39.168 1.00 99.96 O
ATOM 6 C5' G B 14 -100.035 -0.953 39.296 1.00 98.17 C
ATOM 7 C4' G B 14 -99.702 0.506 39.056 1.00 88.42 C
ATOM 8 O4' G B 14 -98.322 0.689 39.446 1.00 86.79 O
ATOM 9 C3' G B 14 -99.784 0.994 37.608 1.00 77.64 C
ATOM 10 O3' G B 14 -99.951 2.413 37.533 1.00 90.47 O
ATOM 11 C2' G B 14 -98.432 0.563 37.070 1.00 65.59 C
ATOM 12 O2' G B 14 -98.011 1.224 35.894 1.00 65.35 O
ATOM 13 C1' G B 14 -97.564 0.945 38.275 1.00 73.79 C
ATOM 14 N9 G B 14 -96.277 0.254 38.347 1.00 64.60 N
ATOM 15 C8 G B 14 -95.063 0.880 38.518 1.00 53.65 C
ATOM 16 N7 G B 14 -94.068 0.055 38.547 1.00 49.83 N
ATOM 17 C5 G B 14 -94.643 -1.192 38.378 1.00 55.24 C
ATOM 18 C6 G B 14 -94.038 -2.465 38.332 1.00 74.85 C
ATOM 19 O6 G B 14 -92.833 -2.717 38.409 1.00 65.69 O
ATOM 20 N1 G B 14 -94.969 -3.491 38.162 1.00 68.28 N
ATOM 21 C2 G B 14 -96.327 -3.307 38.062 1.00 65.95 C
ATOM 22 N2 G B 14 -97.082 -4.399 37.890 1.00 66.57 N
ATOM 23 N3 G B 14 -96.898 -2.112 38.097 1.00 62.89 N
ATOM 24 C4 G B 14 -96.007 -1.098 38.262 1.00 53.85 C
ATOM 25 P G B 15 -101.122 3.114 36.683 1.00 87.15 P
ATOM 26 OP1 G B 15 -101.259 2.391 35.392 1.00 83.77 O
ATOM 27 OP2 G B 15 -100.848 4.568 36.675 1.00 86.81 O
ATOM 28 O5' G B 15 -102.413 2.897 37.600 1.00 85.85 O
TER

Atoms:
OP1: (-87.632,-7.228,44.035)
OP2: (-87.537,-4.698,44.381)
C3': (-91.127,-5.858,40.902)
C1': (-92.948,-4.683,41.851)
C5': (-90.382,-6.897,43.111)
O4': (-92.380,-5.511,42.852)
C8: (-91.289,-2.841,42.404)
O2': (-93.358,-6.143,39.927)
C6: (-93.004,0.196,42.176)
C5: (-92.459,-1.108,42.225)
C4: (-93.320,-2.166,41.946)
P: (-88.308,-5.950,44.358)
C4': (-91.538,-6.502,42.217)
C2': (-92.450,-5.226,40.508)
C2: (-95.039,-0.788,41.608)
N1: (-94.324,0.337,41.854)
N3: (-94.635,-2.075,41.622)
N6: (-92.249,1.266,42.437)
N7: (-91.181,-1.546,42.517)
N9: (-92.542,-3.292,42.065)
O5': (-89.532,-5.787,43.353)
O3': (-90.656,-6.852,40.004)
OP1: (-101.049,-3.362,37.919)
OP2: (-103.406,-2.569,38.615)
C3': (-99.784,0.994,37.608)
C1': (-97.564,0.945,38.275)
C5': (-100.035,-0.953,39.296)
O6: (-92.833,-2.717,38.409)
O4': (-98.322,0.689,39.446)
C8: (-95.063,0.880,38.518)
C2: (-96.327,-3.307,38.062)
C6: (-94.038,-2.465,38.332)
C5: (-94.643,-1.192,38.378)
C4: (-96.007,-1.098,38.262)
P: (-102.035,-2.271,38.143)
C4': (-99.702,0.506,39.056)
C2': (-98.432,0.563,37.070)
O2': (-98.011,1.224,35.894)
N1: (-94.969,-3.491,38.162)
N2: (-97.082,-4.399,37.890)
N3: (-96.898,-2.112,38.097)
N7: (-94.068,0.055,38.547)
N9: (-96.277,0.254,38.347)
O5': (-101.433,-1.196,39.168)
O3': (-99.951,2.413,37.533)
Image (generated by PyMOL):
PyMOL image
show in jmol