Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:432:156
Extra
PDB:
ATOM 1 O3' C A 31 75.432 -19.377 122.989 1.00 58.96 O
ATOM 2 P A A 32 74.417 -20.389 123.689 1.00 53.87 P
ATOM 3 OP1 A A 32 75.020 -20.748 125.034 1.00 54.63 O
ATOM 4 OP2 A A 32 74.148 -21.480 122.713 1.00 53.47 O
ATOM 5 O5' A A 32 73.113 -19.460 123.903 1.00 53.56 O
ATOM 6 C5' A A 32 73.174 -18.292 124.738 1.00 53.88 C
ATOM 7 C4' A A 32 71.855 -17.560 124.816 1.00 53.55 C
ATOM 8 O4' A A 32 71.462 -17.160 123.486 1.00 52.87 O
ATOM 9 C3' A A 32 70.687 -18.370 125.377 1.00 53.55 C
ATOM 10 O3' A A 32 69.732 -17.498 125.962 1.00 53.55 O
ATOM 11 C2' A A 32 70.039 -18.930 124.130 1.00 52.88 C
ATOM 12 O2' A A 32 68.660 -19.194 124.304 1.00 52.66 O
ATOM 13 C1' A A 32 70.237 -17.784 123.146 1.00 52.46 C
ATOM 14 N9 A A 32 70.281 -18.190 121.736 1.00 51.90 N
ATOM 15 C8 A A 32 71.050 -19.099 121.024 1.00 51.85 C
ATOM 16 N7 A A 32 70.773 -19.139 119.727 1.00 51.28 N
ATOM 17 C5 A A 32 69.766 -18.184 119.589 1.00 50.93 C
ATOM 18 C6 A A 32 69.033 -17.693 118.503 1.00 50.33 C
ATOM 19 N6 A A 32 69.173 -18.115 117.255 1.00 49.92 N
ATOM 20 N1 A A 32 68.114 -16.744 118.718 1.00 50.16 N
ATOM 21 C2 A A 32 67.949 -16.289 119.951 1.00 50.59 C
ATOM 22 N3 A A 32 68.550 -16.653 121.065 1.00 51.18 N
ATOM 23 C4 A A 32 69.458 -17.608 120.807 1.00 51.31 C
ATOM 24 P U A 33 69.808 -17.048 127.476 1.00 54.09 P
ATOM 25 OP1 U A 33 71.225 -16.939 127.836 1.00 54.59 O
ATOM 26 OP2 U A 33 68.958 -17.935 128.262 1.00 54.29 O
ATOM 27 O5' U A 33 69.164 -15.623 127.386 1.00 53.88 O
TER
ATOM 1 O3' G B 55 63.882 -22.390 125.882 1.00 48.61 O
ATOM 2 P G B 56 65.000 -21.348 126.363 1.00 47.13 P
ATOM 3 OP1 G B 56 65.432 -21.759 127.728 1.00 47.77 O
ATOM 4 OP2 G B 56 64.390 -19.994 126.171 1.00 46.88 O
ATOM 5 O5' G B 56 66.203 -21.530 125.306 1.00 46.91 O
ATOM 6 C5' G B 56 66.963 -22.723 125.209 1.00 47.08 C
ATOM 7 C4' G B 56 67.168 -23.107 123.774 1.00 46.59 C
ATOM 8 O4' G B 56 66.192 -22.408 122.974 1.00 46.08 O
ATOM 9 C3' G B 56 68.528 -22.759 123.165 1.00 46.55 C
ATOM 10 O3' G B 56 68.870 -23.725 122.185 1.00 46.32 O
ATOM 11 C2' G B 56 68.218 -21.490 122.411 1.00 46.12 C
ATOM 12 O2' G B 56 69.100 -21.228 121.339 1.00 45.85 O
ATOM 13 C1' G B 56 66.837 -21.818 121.896 1.00 45.73 C
ATOM 14 N9 G B 56 66.077 -20.659 121.447 1.00 45.37 N
ATOM 15 C8 G B 56 65.642 -19.641 122.220 1.00 45.53 C
ATOM 16 N7 G B 56 65.059 -18.710 121.540 1.00 45.14 N
ATOM 17 C5 G B 56 65.134 -19.145 120.222 1.00 44.69 C
ATOM 18 C6 G B 56 64.646 -18.528 119.044 1.00 44.17 C
ATOM 19 O6 G B 56 64.049 -17.451 118.931 1.00 43.99 O
ATOM 20 N1 G B 56 64.927 -19.293 117.931 1.00 43.86 N
ATOM 21 C2 G B 56 65.575 -20.487 117.923 1.00 44.03 C
ATOM 22 N2 G B 56 65.677 -21.011 116.689 1.00 43.65 N
ATOM 23 N3 G B 56 66.053 -21.084 119.013 1.00 44.52 N
ATOM 24 C4 G B 56 65.771 -20.360 120.131 1.00 44.82 C
ATOM 25 P A B 57 69.498 -25.152 122.557 1.00 50.30 P
ATOM 26 OP1 A B 57 69.038 -25.528 123.919 1.00 50.77 O
ATOM 27 OP2 A B 57 70.921 -25.060 122.304 1.00 50.44 O
ATOM 28 O5' A B 57 68.823 -26.109 121.459 1.00 49.87 O
TER
ATOM 2 P A A 32 74.417 -20.389 123.689 1.00 53.87 P
ATOM 3 OP1 A A 32 75.020 -20.748 125.034 1.00 54.63 O
ATOM 4 OP2 A A 32 74.148 -21.480 122.713 1.00 53.47 O
ATOM 5 O5' A A 32 73.113 -19.460 123.903 1.00 53.56 O
ATOM 6 C5' A A 32 73.174 -18.292 124.738 1.00 53.88 C
ATOM 7 C4' A A 32 71.855 -17.560 124.816 1.00 53.55 C
ATOM 8 O4' A A 32 71.462 -17.160 123.486 1.00 52.87 O
ATOM 9 C3' A A 32 70.687 -18.370 125.377 1.00 53.55 C
ATOM 10 O3' A A 32 69.732 -17.498 125.962 1.00 53.55 O
ATOM 11 C2' A A 32 70.039 -18.930 124.130 1.00 52.88 C
ATOM 12 O2' A A 32 68.660 -19.194 124.304 1.00 52.66 O
ATOM 13 C1' A A 32 70.237 -17.784 123.146 1.00 52.46 C
ATOM 14 N9 A A 32 70.281 -18.190 121.736 1.00 51.90 N
ATOM 15 C8 A A 32 71.050 -19.099 121.024 1.00 51.85 C
ATOM 16 N7 A A 32 70.773 -19.139 119.727 1.00 51.28 N
ATOM 17 C5 A A 32 69.766 -18.184 119.589 1.00 50.93 C
ATOM 18 C6 A A 32 69.033 -17.693 118.503 1.00 50.33 C
ATOM 19 N6 A A 32 69.173 -18.115 117.255 1.00 49.92 N
ATOM 20 N1 A A 32 68.114 -16.744 118.718 1.00 50.16 N
ATOM 21 C2 A A 32 67.949 -16.289 119.951 1.00 50.59 C
ATOM 22 N3 A A 32 68.550 -16.653 121.065 1.00 51.18 N
ATOM 23 C4 A A 32 69.458 -17.608 120.807 1.00 51.31 C
ATOM 24 P U A 33 69.808 -17.048 127.476 1.00 54.09 P
ATOM 25 OP1 U A 33 71.225 -16.939 127.836 1.00 54.59 O
ATOM 26 OP2 U A 33 68.958 -17.935 128.262 1.00 54.29 O
ATOM 27 O5' U A 33 69.164 -15.623 127.386 1.00 53.88 O
TER
ATOM 1 O3' G B 55 63.882 -22.390 125.882 1.00 48.61 O
ATOM 2 P G B 56 65.000 -21.348 126.363 1.00 47.13 P
ATOM 3 OP1 G B 56 65.432 -21.759 127.728 1.00 47.77 O
ATOM 4 OP2 G B 56 64.390 -19.994 126.171 1.00 46.88 O
ATOM 5 O5' G B 56 66.203 -21.530 125.306 1.00 46.91 O
ATOM 6 C5' G B 56 66.963 -22.723 125.209 1.00 47.08 C
ATOM 7 C4' G B 56 67.168 -23.107 123.774 1.00 46.59 C
ATOM 8 O4' G B 56 66.192 -22.408 122.974 1.00 46.08 O
ATOM 9 C3' G B 56 68.528 -22.759 123.165 1.00 46.55 C
ATOM 10 O3' G B 56 68.870 -23.725 122.185 1.00 46.32 O
ATOM 11 C2' G B 56 68.218 -21.490 122.411 1.00 46.12 C
ATOM 12 O2' G B 56 69.100 -21.228 121.339 1.00 45.85 O
ATOM 13 C1' G B 56 66.837 -21.818 121.896 1.00 45.73 C
ATOM 14 N9 G B 56 66.077 -20.659 121.447 1.00 45.37 N
ATOM 15 C8 G B 56 65.642 -19.641 122.220 1.00 45.53 C
ATOM 16 N7 G B 56 65.059 -18.710 121.540 1.00 45.14 N
ATOM 17 C5 G B 56 65.134 -19.145 120.222 1.00 44.69 C
ATOM 18 C6 G B 56 64.646 -18.528 119.044 1.00 44.17 C
ATOM 19 O6 G B 56 64.049 -17.451 118.931 1.00 43.99 O
ATOM 20 N1 G B 56 64.927 -19.293 117.931 1.00 43.86 N
ATOM 21 C2 G B 56 65.575 -20.487 117.923 1.00 44.03 C
ATOM 22 N2 G B 56 65.677 -21.011 116.689 1.00 43.65 N
ATOM 23 N3 G B 56 66.053 -21.084 119.013 1.00 44.52 N
ATOM 24 C4 G B 56 65.771 -20.360 120.131 1.00 44.82 C
ATOM 25 P A B 57 69.498 -25.152 122.557 1.00 50.30 P
ATOM 26 OP1 A B 57 69.038 -25.528 123.919 1.00 50.77 O
ATOM 27 OP2 A B 57 70.921 -25.060 122.304 1.00 50.44 O
ATOM 28 O5' A B 57 68.823 -26.109 121.459 1.00 49.87 O
TER
Atoms:
OP1: (75.020,-20.748,125.034)
OP2: (74.148,-21.480,122.713)
C3': (70.687,-18.370,125.377)
C1': (70.237,-17.784,123.146)
C5': (73.174,-18.292,124.738)
O4': (71.462,-17.160,123.486)
C8: (71.050,-19.099,121.024)
O2': (68.660,-19.194,124.304)
C6: (69.033,-17.693,118.503)
C5: (69.766,-18.184,119.589)
C4: (69.458,-17.608,120.807)
P: (74.417,-20.389,123.689)
C4': (71.855,-17.560,124.816)
C2': (70.039,-18.930,124.130)
C2: (67.949,-16.289,119.951)
N1: (68.114,-16.744,118.718)
N3: (68.550,-16.653,121.065)
N6: (69.173,-18.115,117.255)
N7: (70.773,-19.139,119.727)
N9: (70.281,-18.190,121.736)
O5': (73.113,-19.460,123.903)
O3': (69.732,-17.498,125.962)
OP2: (74.148,-21.480,122.713)
C3': (70.687,-18.370,125.377)
C1': (70.237,-17.784,123.146)
C5': (73.174,-18.292,124.738)
O4': (71.462,-17.160,123.486)
C8: (71.050,-19.099,121.024)
O2': (68.660,-19.194,124.304)
C6: (69.033,-17.693,118.503)
C5: (69.766,-18.184,119.589)
C4: (69.458,-17.608,120.807)
P: (74.417,-20.389,123.689)
C4': (71.855,-17.560,124.816)
C2': (70.039,-18.930,124.130)
C2: (67.949,-16.289,119.951)
N1: (68.114,-16.744,118.718)
N3: (68.550,-16.653,121.065)
N6: (69.173,-18.115,117.255)
N7: (70.773,-19.139,119.727)
N9: (70.281,-18.190,121.736)
O5': (73.113,-19.460,123.903)
O3': (69.732,-17.498,125.962)
OP1: (65.432,-21.759,127.728)
OP2: (64.390,-19.994,126.171)
C3': (68.528,-22.759,123.165)
C1': (66.837,-21.818,121.896)
C5': (66.963,-22.723,125.209)
O6: (64.049,-17.451,118.931)
O4': (66.192,-22.408,122.974)
C8: (65.642,-19.641,122.220)
C2: (65.575,-20.487,117.923)
C6: (64.646,-18.528,119.044)
C5: (65.134,-19.145,120.222)
C4: (65.771,-20.360,120.131)
P: (65.000,-21.348,126.363)
C4': (67.168,-23.107,123.774)
C2': (68.218,-21.490,122.411)
O2': (69.100,-21.228,121.339)
N1: (64.927,-19.293,117.931)
N2: (65.677,-21.011,116.689)
N3: (66.053,-21.084,119.013)
N7: (65.059,-18.710,121.540)
N9: (66.077,-20.659,121.447)
O5': (66.203,-21.530,125.306)
O3': (68.870,-23.725,122.185)
OP2: (64.390,-19.994,126.171)
C3': (68.528,-22.759,123.165)
C1': (66.837,-21.818,121.896)
C5': (66.963,-22.723,125.209)
O6: (64.049,-17.451,118.931)
O4': (66.192,-22.408,122.974)
C8: (65.642,-19.641,122.220)
C2: (65.575,-20.487,117.923)
C6: (64.646,-18.528,119.044)
C5: (65.134,-19.145,120.222)
C4: (65.771,-20.360,120.131)
P: (65.000,-21.348,126.363)
C4': (67.168,-23.107,123.774)
C2': (68.218,-21.490,122.411)
O2': (69.100,-21.228,121.339)
N1: (64.927,-19.293,117.931)
N2: (65.677,-21.011,116.689)
N3: (66.053,-21.084,119.013)
N7: (65.059,-18.710,121.540)
N9: (66.077,-20.659,121.447)
O5': (66.203,-21.530,125.306)
O3': (68.870,-23.725,122.185)
Image (generated by PyMOL):