Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A9:A57
Extra
PDB:
ATOM 1 O3' A A 8 20.011 6.264 4.429 1.00 24.10 O
ATOM 2 P A A 9 19.831 6.428 6.018 1.00 23.02 P
ATOM 3 OP1 A A 9 20.720 5.436 6.678 1.00 23.63 O
ATOM 4 OP2 A A 9 18.378 6.419 6.314 1.00 23.18 O
ATOM 5 O5' A A 9 20.405 7.882 6.331 1.00 22.61 O
ATOM 6 C5' A A 9 19.698 9.052 5.940 1.00 21.19 C
ATOM 7 C4' A A 9 19.507 9.966 7.125 1.00 21.33 C
ATOM 8 O4' A A 9 18.554 9.359 8.031 1.00 20.80 O
ATOM 9 C3' A A 9 20.734 10.205 7.993 1.00 21.07 C
ATOM 10 O3' A A 9 21.522 11.266 7.446 1.00 22.34 O
ATOM 11 C2' A A 9 20.097 10.635 9.314 1.00 21.93 C
ATOM 12 O2' A A 9 19.698 11.989 9.293 1.00 21.81 O
ATOM 13 C1' A A 9 18.830 9.775 9.352 1.00 20.69 C
ATOM 14 N9 A A 9 18.910 8.584 10.193 1.00 19.32 N
ATOM 15 C8 A A 9 18.909 7.272 9.784 1.00 19.20 C
ATOM 16 N7 A A 9 18.940 6.412 10.769 1.00 19.20 N
ATOM 17 C5 A A 9 18.970 7.208 11.905 1.00 20.12 C
ATOM 18 C6 A A 9 18.994 6.897 13.274 1.00 20.57 C
ATOM 19 N6 A A 9 18.962 5.648 13.746 1.00 21.44 N
ATOM 20 N1 A A 9 19.040 7.925 14.150 1.00 20.13 N
ATOM 21 C2 A A 9 19.041 9.177 13.672 1.00 19.95 C
ATOM 22 N3 A A 9 19.003 9.597 12.406 1.00 20.24 N
ATOM 23 C4 A A 9 18.970 8.548 11.564 1.00 19.90 C
ATOM 24 P U A 10 23.067 11.010 7.050 1.00 22.56 P
ATOM 25 OP1 U A 10 23.436 9.627 7.448 1.00 21.79 O
ATOM 26 OP2 U A 10 23.850 12.152 7.582 1.00 24.08 O
ATOM 27 O5' U A 10 23.092 11.168 5.463 1.00 23.61 O
TER
ATOM 1 O3' C B 56 22.241 -2.183 12.830 1.00 12.49 O
ATOM 2 P G B 57 20.751 -1.611 12.688 1.00 13.61 P
ATOM 3 OP1 G B 57 19.813 -2.684 13.089 1.00 12.61 O
ATOM 4 OP2 G B 57 20.615 -0.976 11.346 1.00 14.52 O
ATOM 5 O5' G B 57 20.692 -0.433 13.763 1.00 12.97 O
ATOM 6 C5' G B 57 20.768 -0.722 15.151 1.00 15.10 C
ATOM 7 C4' G B 57 20.786 0.556 15.943 1.00 15.52 C
ATOM 8 O4' G B 57 21.955 1.330 15.580 1.00 16.22 O
ATOM 9 C3' G B 57 19.633 1.501 15.665 1.00 17.22 C
ATOM 10 O3' G B 57 18.511 1.082 16.422 1.00 19.77 O
ATOM 11 C2' G B 57 20.204 2.821 16.168 1.00 17.12 C
ATOM 12 O2' G B 57 20.173 2.920 17.579 1.00 18.35 O
ATOM 13 C1' G B 57 21.656 2.712 15.694 1.00 16.00 C
ATOM 14 N9 G B 57 21.872 3.350 14.400 1.00 14.75 N
ATOM 15 C8 G B 57 21.952 2.763 13.157 1.00 14.52 C
ATOM 16 N7 G B 57 22.127 3.632 12.193 1.00 14.58 N
ATOM 17 C5 G B 57 22.173 4.861 12.847 1.00 13.97 C
ATOM 18 C6 G B 57 22.334 6.183 12.336 1.00 13.73 C
ATOM 19 O6 G B 57 22.467 6.554 11.159 1.00 13.41 O
ATOM 20 N1 G B 57 22.318 7.128 13.360 1.00 13.91 N
ATOM 21 C2 G B 57 22.159 6.848 14.694 1.00 14.51 C
ATOM 22 N2 G B 57 22.157 7.898 15.538 1.00 15.74 N
ATOM 23 N3 G B 57 22.007 5.632 15.176 1.00 14.74 N
ATOM 24 C4 G B 57 22.021 4.697 14.205 1.00 14.39 C
ATOM 25 P A B 58 17.026 1.416 15.913 1.00 23.12 P
ATOM 26 OP1 A B 58 16.093 0.577 16.715 1.00 24.66 O
ATOM 27 OP2 A B 58 16.963 1.359 14.435 1.00 23.05 O
ATOM 28 O5' A B 58 16.825 2.931 16.346 1.00 23.43 O
TER
ATOM 2 P A A 9 19.831 6.428 6.018 1.00 23.02 P
ATOM 3 OP1 A A 9 20.720 5.436 6.678 1.00 23.63 O
ATOM 4 OP2 A A 9 18.378 6.419 6.314 1.00 23.18 O
ATOM 5 O5' A A 9 20.405 7.882 6.331 1.00 22.61 O
ATOM 6 C5' A A 9 19.698 9.052 5.940 1.00 21.19 C
ATOM 7 C4' A A 9 19.507 9.966 7.125 1.00 21.33 C
ATOM 8 O4' A A 9 18.554 9.359 8.031 1.00 20.80 O
ATOM 9 C3' A A 9 20.734 10.205 7.993 1.00 21.07 C
ATOM 10 O3' A A 9 21.522 11.266 7.446 1.00 22.34 O
ATOM 11 C2' A A 9 20.097 10.635 9.314 1.00 21.93 C
ATOM 12 O2' A A 9 19.698 11.989 9.293 1.00 21.81 O
ATOM 13 C1' A A 9 18.830 9.775 9.352 1.00 20.69 C
ATOM 14 N9 A A 9 18.910 8.584 10.193 1.00 19.32 N
ATOM 15 C8 A A 9 18.909 7.272 9.784 1.00 19.20 C
ATOM 16 N7 A A 9 18.940 6.412 10.769 1.00 19.20 N
ATOM 17 C5 A A 9 18.970 7.208 11.905 1.00 20.12 C
ATOM 18 C6 A A 9 18.994 6.897 13.274 1.00 20.57 C
ATOM 19 N6 A A 9 18.962 5.648 13.746 1.00 21.44 N
ATOM 20 N1 A A 9 19.040 7.925 14.150 1.00 20.13 N
ATOM 21 C2 A A 9 19.041 9.177 13.672 1.00 19.95 C
ATOM 22 N3 A A 9 19.003 9.597 12.406 1.00 20.24 N
ATOM 23 C4 A A 9 18.970 8.548 11.564 1.00 19.90 C
ATOM 24 P U A 10 23.067 11.010 7.050 1.00 22.56 P
ATOM 25 OP1 U A 10 23.436 9.627 7.448 1.00 21.79 O
ATOM 26 OP2 U A 10 23.850 12.152 7.582 1.00 24.08 O
ATOM 27 O5' U A 10 23.092 11.168 5.463 1.00 23.61 O
TER
ATOM 1 O3' C B 56 22.241 -2.183 12.830 1.00 12.49 O
ATOM 2 P G B 57 20.751 -1.611 12.688 1.00 13.61 P
ATOM 3 OP1 G B 57 19.813 -2.684 13.089 1.00 12.61 O
ATOM 4 OP2 G B 57 20.615 -0.976 11.346 1.00 14.52 O
ATOM 5 O5' G B 57 20.692 -0.433 13.763 1.00 12.97 O
ATOM 6 C5' G B 57 20.768 -0.722 15.151 1.00 15.10 C
ATOM 7 C4' G B 57 20.786 0.556 15.943 1.00 15.52 C
ATOM 8 O4' G B 57 21.955 1.330 15.580 1.00 16.22 O
ATOM 9 C3' G B 57 19.633 1.501 15.665 1.00 17.22 C
ATOM 10 O3' G B 57 18.511 1.082 16.422 1.00 19.77 O
ATOM 11 C2' G B 57 20.204 2.821 16.168 1.00 17.12 C
ATOM 12 O2' G B 57 20.173 2.920 17.579 1.00 18.35 O
ATOM 13 C1' G B 57 21.656 2.712 15.694 1.00 16.00 C
ATOM 14 N9 G B 57 21.872 3.350 14.400 1.00 14.75 N
ATOM 15 C8 G B 57 21.952 2.763 13.157 1.00 14.52 C
ATOM 16 N7 G B 57 22.127 3.632 12.193 1.00 14.58 N
ATOM 17 C5 G B 57 22.173 4.861 12.847 1.00 13.97 C
ATOM 18 C6 G B 57 22.334 6.183 12.336 1.00 13.73 C
ATOM 19 O6 G B 57 22.467 6.554 11.159 1.00 13.41 O
ATOM 20 N1 G B 57 22.318 7.128 13.360 1.00 13.91 N
ATOM 21 C2 G B 57 22.159 6.848 14.694 1.00 14.51 C
ATOM 22 N2 G B 57 22.157 7.898 15.538 1.00 15.74 N
ATOM 23 N3 G B 57 22.007 5.632 15.176 1.00 14.74 N
ATOM 24 C4 G B 57 22.021 4.697 14.205 1.00 14.39 C
ATOM 25 P A B 58 17.026 1.416 15.913 1.00 23.12 P
ATOM 26 OP1 A B 58 16.093 0.577 16.715 1.00 24.66 O
ATOM 27 OP2 A B 58 16.963 1.359 14.435 1.00 23.05 O
ATOM 28 O5' A B 58 16.825 2.931 16.346 1.00 23.43 O
TER
Atoms:
OP1: (20.720,5.436,6.678)
OP2: (18.378,6.419,6.314)
C3': (20.734,10.205,7.993)
C1': (18.830,9.775,9.352)
C5': (19.698,9.052,5.940)
O4': (18.554,9.359,8.031)
C8: (18.909,7.272,9.784)
O2': (19.698,11.989,9.293)
C6: (18.994,6.897,13.274)
C5: (18.970,7.208,11.905)
C4: (18.970,8.548,11.564)
P: (19.831,6.428,6.018)
C4': (19.507,9.966,7.125)
C2': (20.097,10.635,9.314)
C2: (19.041,9.177,13.672)
N1: (19.040,7.925,14.150)
N3: (19.003,9.597,12.406)
N6: (18.962,5.648,13.746)
N7: (18.940,6.412,10.769)
N9: (18.910,8.584,10.193)
O5': (20.405,7.882,6.331)
O3': (21.522,11.266,7.446)
OP2: (18.378,6.419,6.314)
C3': (20.734,10.205,7.993)
C1': (18.830,9.775,9.352)
C5': (19.698,9.052,5.940)
O4': (18.554,9.359,8.031)
C8: (18.909,7.272,9.784)
O2': (19.698,11.989,9.293)
C6: (18.994,6.897,13.274)
C5: (18.970,7.208,11.905)
C4: (18.970,8.548,11.564)
P: (19.831,6.428,6.018)
C4': (19.507,9.966,7.125)
C2': (20.097,10.635,9.314)
C2: (19.041,9.177,13.672)
N1: (19.040,7.925,14.150)
N3: (19.003,9.597,12.406)
N6: (18.962,5.648,13.746)
N7: (18.940,6.412,10.769)
N9: (18.910,8.584,10.193)
O5': (20.405,7.882,6.331)
O3': (21.522,11.266,7.446)
OP1: (19.813,-2.684,13.089)
OP2: (20.615,-0.976,11.346)
C3': (19.633,1.501,15.665)
C1': (21.656,2.712,15.694)
C5': (20.768,-0.722,15.151)
O6: (22.467,6.554,11.159)
O4': (21.955,1.330,15.580)
C8: (21.952,2.763,13.157)
C2: (22.159,6.848,14.694)
C6: (22.334,6.183,12.336)
C5: (22.173,4.861,12.847)
C4: (22.021,4.697,14.205)
P: (20.751,-1.611,12.688)
C4': (20.786,0.556,15.943)
C2': (20.204,2.821,16.168)
O2': (20.173,2.920,17.579)
N1: (22.318,7.128,13.360)
N2: (22.157,7.898,15.538)
N3: (22.007,5.632,15.176)
N7: (22.127,3.632,12.193)
N9: (21.872,3.350,14.400)
O5': (20.692,-0.433,13.763)
O3': (18.511,1.082,16.422)
OP2: (20.615,-0.976,11.346)
C3': (19.633,1.501,15.665)
C1': (21.656,2.712,15.694)
C5': (20.768,-0.722,15.151)
O6: (22.467,6.554,11.159)
O4': (21.955,1.330,15.580)
C8: (21.952,2.763,13.157)
C2: (22.159,6.848,14.694)
C6: (22.334,6.183,12.336)
C5: (22.173,4.861,12.847)
C4: (22.021,4.697,14.205)
P: (20.751,-1.611,12.688)
C4': (20.786,0.556,15.943)
C2': (20.204,2.821,16.168)
O2': (20.173,2.920,17.579)
N1: (22.318,7.128,13.360)
N2: (22.157,7.898,15.538)
N3: (22.007,5.632,15.176)
N7: (22.127,3.632,12.193)
N9: (21.872,3.350,14.400)
O5': (20.692,-0.433,13.763)
O3': (18.511,1.082,16.422)
Image (generated by PyMOL):