Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B10:B58
Extra
PDB:
ATOM 1 O3' A A 9 -28.845 -4.295 21.520 1.00 26.73 O
ATOM 2 P A A 10 -27.644 -3.329 21.969 1.00 27.01 P
ATOM 3 OP1 A A 10 -26.798 -4.143 22.874 1.00 25.61 O
ATOM 4 OP2 A A 10 -28.242 -2.072 22.483 1.00 27.64 O
ATOM 5 O5' A A 10 -26.864 -3.046 20.611 1.00 26.58 O
ATOM 6 C5' A A 10 -27.511 -2.467 19.480 1.00 26.93 C
ATOM 7 C4' A A 10 -26.669 -1.358 18.910 1.00 26.40 C
ATOM 8 O4' A A 10 -26.411 -0.375 19.940 1.00 26.49 O
ATOM 9 C3' A A 10 -25.292 -1.754 18.409 1.00 25.99 C
ATOM 10 O3' A A 10 -25.348 -2.259 17.093 1.00 27.43 O
ATOM 11 C2' A A 10 -24.519 -0.444 18.511 1.00 24.87 C
ATOM 12 O2' A A 10 -24.861 0.394 17.417 1.00 25.22 O
ATOM 13 C1' A A 10 -25.118 0.166 19.776 1.00 24.92 C
ATOM 14 N9 A A 10 -24.331 -0.113 20.994 1.00 23.96 N
ATOM 15 C8 A A 10 -24.711 -0.856 22.085 1.00 23.89 C
ATOM 16 N7 A A 10 -23.799 -0.915 23.023 1.00 23.60 N
ATOM 17 C5 A A 10 -22.753 -0.156 22.519 1.00 23.06 C
ATOM 18 C6 A A 10 -21.489 0.171 23.036 1.00 22.79 C
ATOM 19 N6 A A 10 -21.051 -0.242 24.226 1.00 22.82 N
ATOM 20 N1 A A 10 -20.682 0.947 22.280 1.00 22.81 N
ATOM 21 C2 A A 10 -21.126 1.361 21.086 1.00 23.07 C
ATOM 22 N3 A A 10 -22.293 1.120 20.492 1.00 23.34 N
ATOM 23 C4 A A 10 -23.069 0.349 21.271 1.00 23.41 C
ATOM 24 P C A 11 -24.899 -3.755 16.735 1.00 27.32 P
ATOM 25 OP1 C A 11 -24.397 -4.402 17.973 1.00 26.66 O
ATOM 26 OP2 C A 11 -24.000 -3.621 15.562 1.00 26.88 O
ATOM 27 O5' C A 11 -26.290 -4.392 16.300 1.00 29.16 O
TER
ATOM 1 O3' U B 57 -20.390 -7.007 29.832 1.00 23.78 O
ATOM 2 P G B 58 -21.498 -5.859 29.975 1.00 23.59 P
ATOM 3 OP1 G B 58 -21.745 -5.704 31.432 1.00 21.70 O
ATOM 4 OP2 G B 58 -22.616 -6.229 29.068 1.00 22.82 O
ATOM 5 O5' G B 58 -20.727 -4.599 29.390 1.00 22.88 O
ATOM 6 C5' G B 58 -19.591 -4.077 30.071 1.00 22.84 C
ATOM 7 C4' G B 58 -18.914 -3.031 29.230 1.00 23.15 C
ATOM 8 O4' G B 58 -18.468 -3.615 27.981 1.00 23.16 O
ATOM 9 C3' G B 58 -19.775 -1.849 28.815 1.00 22.70 C
ATOM 10 O3' G B 58 -19.875 -0.884 29.845 1.00 22.99 O
ATOM 11 C2' G B 58 -19.054 -1.347 27.567 1.00 22.57 C
ATOM 12 O2' G B 58 -17.917 -0.583 27.940 1.00 22.55 O
ATOM 13 C1' G B 58 -18.567 -2.661 26.945 1.00 23.03 C
ATOM 14 N9 G B 58 -19.471 -3.171 25.894 1.00 22.75 N
ATOM 15 C8 G B 58 -20.502 -4.071 26.023 1.00 22.72 C
ATOM 16 N7 G B 58 -21.109 -4.314 24.892 1.00 22.61 N
ATOM 17 C5 G B 58 -20.436 -3.528 23.964 1.00 22.45 C
ATOM 18 C6 G B 58 -20.637 -3.365 22.570 1.00 22.57 C
ATOM 19 O6 G B 58 -21.480 -3.899 21.842 1.00 23.18 O
ATOM 20 N1 G B 58 -19.726 -2.470 22.021 1.00 22.53 N
ATOM 21 C2 G B 58 -18.747 -1.812 22.719 1.00 22.42 C
ATOM 22 N2 G B 58 -17.965 -0.987 22.010 1.00 22.38 N
ATOM 23 N3 G B 58 -18.548 -1.955 24.016 1.00 22.39 N
ATOM 24 C4 G B 58 -19.422 -2.822 24.568 1.00 22.40 C
ATOM 25 P A B 59 -21.066 0.196 29.870 1.00 24.58 P
ATOM 26 OP1 A B 59 -21.049 0.815 31.220 1.00 22.66 O
ATOM 27 OP2 A B 59 -22.288 -0.497 29.396 1.00 24.16 O
ATOM 28 O5' A B 59 -20.601 1.246 28.775 1.00 22.85 O
TER
ATOM 2 P A A 10 -27.644 -3.329 21.969 1.00 27.01 P
ATOM 3 OP1 A A 10 -26.798 -4.143 22.874 1.00 25.61 O
ATOM 4 OP2 A A 10 -28.242 -2.072 22.483 1.00 27.64 O
ATOM 5 O5' A A 10 -26.864 -3.046 20.611 1.00 26.58 O
ATOM 6 C5' A A 10 -27.511 -2.467 19.480 1.00 26.93 C
ATOM 7 C4' A A 10 -26.669 -1.358 18.910 1.00 26.40 C
ATOM 8 O4' A A 10 -26.411 -0.375 19.940 1.00 26.49 O
ATOM 9 C3' A A 10 -25.292 -1.754 18.409 1.00 25.99 C
ATOM 10 O3' A A 10 -25.348 -2.259 17.093 1.00 27.43 O
ATOM 11 C2' A A 10 -24.519 -0.444 18.511 1.00 24.87 C
ATOM 12 O2' A A 10 -24.861 0.394 17.417 1.00 25.22 O
ATOM 13 C1' A A 10 -25.118 0.166 19.776 1.00 24.92 C
ATOM 14 N9 A A 10 -24.331 -0.113 20.994 1.00 23.96 N
ATOM 15 C8 A A 10 -24.711 -0.856 22.085 1.00 23.89 C
ATOM 16 N7 A A 10 -23.799 -0.915 23.023 1.00 23.60 N
ATOM 17 C5 A A 10 -22.753 -0.156 22.519 1.00 23.06 C
ATOM 18 C6 A A 10 -21.489 0.171 23.036 1.00 22.79 C
ATOM 19 N6 A A 10 -21.051 -0.242 24.226 1.00 22.82 N
ATOM 20 N1 A A 10 -20.682 0.947 22.280 1.00 22.81 N
ATOM 21 C2 A A 10 -21.126 1.361 21.086 1.00 23.07 C
ATOM 22 N3 A A 10 -22.293 1.120 20.492 1.00 23.34 N
ATOM 23 C4 A A 10 -23.069 0.349 21.271 1.00 23.41 C
ATOM 24 P C A 11 -24.899 -3.755 16.735 1.00 27.32 P
ATOM 25 OP1 C A 11 -24.397 -4.402 17.973 1.00 26.66 O
ATOM 26 OP2 C A 11 -24.000 -3.621 15.562 1.00 26.88 O
ATOM 27 O5' C A 11 -26.290 -4.392 16.300 1.00 29.16 O
TER
ATOM 1 O3' U B 57 -20.390 -7.007 29.832 1.00 23.78 O
ATOM 2 P G B 58 -21.498 -5.859 29.975 1.00 23.59 P
ATOM 3 OP1 G B 58 -21.745 -5.704 31.432 1.00 21.70 O
ATOM 4 OP2 G B 58 -22.616 -6.229 29.068 1.00 22.82 O
ATOM 5 O5' G B 58 -20.727 -4.599 29.390 1.00 22.88 O
ATOM 6 C5' G B 58 -19.591 -4.077 30.071 1.00 22.84 C
ATOM 7 C4' G B 58 -18.914 -3.031 29.230 1.00 23.15 C
ATOM 8 O4' G B 58 -18.468 -3.615 27.981 1.00 23.16 O
ATOM 9 C3' G B 58 -19.775 -1.849 28.815 1.00 22.70 C
ATOM 10 O3' G B 58 -19.875 -0.884 29.845 1.00 22.99 O
ATOM 11 C2' G B 58 -19.054 -1.347 27.567 1.00 22.57 C
ATOM 12 O2' G B 58 -17.917 -0.583 27.940 1.00 22.55 O
ATOM 13 C1' G B 58 -18.567 -2.661 26.945 1.00 23.03 C
ATOM 14 N9 G B 58 -19.471 -3.171 25.894 1.00 22.75 N
ATOM 15 C8 G B 58 -20.502 -4.071 26.023 1.00 22.72 C
ATOM 16 N7 G B 58 -21.109 -4.314 24.892 1.00 22.61 N
ATOM 17 C5 G B 58 -20.436 -3.528 23.964 1.00 22.45 C
ATOM 18 C6 G B 58 -20.637 -3.365 22.570 1.00 22.57 C
ATOM 19 O6 G B 58 -21.480 -3.899 21.842 1.00 23.18 O
ATOM 20 N1 G B 58 -19.726 -2.470 22.021 1.00 22.53 N
ATOM 21 C2 G B 58 -18.747 -1.812 22.719 1.00 22.42 C
ATOM 22 N2 G B 58 -17.965 -0.987 22.010 1.00 22.38 N
ATOM 23 N3 G B 58 -18.548 -1.955 24.016 1.00 22.39 N
ATOM 24 C4 G B 58 -19.422 -2.822 24.568 1.00 22.40 C
ATOM 25 P A B 59 -21.066 0.196 29.870 1.00 24.58 P
ATOM 26 OP1 A B 59 -21.049 0.815 31.220 1.00 22.66 O
ATOM 27 OP2 A B 59 -22.288 -0.497 29.396 1.00 24.16 O
ATOM 28 O5' A B 59 -20.601 1.246 28.775 1.00 22.85 O
TER
Atoms:
OP1: (-26.798,-4.143,22.874)
OP2: (-28.242,-2.072,22.483)
C3': (-25.292,-1.754,18.409)
C1': (-25.118,0.166,19.776)
C5': (-27.511,-2.467,19.480)
O4': (-26.411,-0.375,19.940)
C8: (-24.711,-0.856,22.085)
O2': (-24.861,0.394,17.417)
C6: (-21.489,0.171,23.036)
C5: (-22.753,-0.156,22.519)
C4: (-23.069,0.349,21.271)
P: (-27.644,-3.329,21.969)
C4': (-26.669,-1.358,18.910)
C2': (-24.519,-0.444,18.511)
C2: (-21.126,1.361,21.086)
N1: (-20.682,0.947,22.280)
N3: (-22.293,1.120,20.492)
N6: (-21.051,-0.242,24.226)
N7: (-23.799,-0.915,23.023)
N9: (-24.331,-0.113,20.994)
O5': (-26.864,-3.046,20.611)
O3': (-25.348,-2.259,17.093)
OP2: (-28.242,-2.072,22.483)
C3': (-25.292,-1.754,18.409)
C1': (-25.118,0.166,19.776)
C5': (-27.511,-2.467,19.480)
O4': (-26.411,-0.375,19.940)
C8: (-24.711,-0.856,22.085)
O2': (-24.861,0.394,17.417)
C6: (-21.489,0.171,23.036)
C5: (-22.753,-0.156,22.519)
C4: (-23.069,0.349,21.271)
P: (-27.644,-3.329,21.969)
C4': (-26.669,-1.358,18.910)
C2': (-24.519,-0.444,18.511)
C2: (-21.126,1.361,21.086)
N1: (-20.682,0.947,22.280)
N3: (-22.293,1.120,20.492)
N6: (-21.051,-0.242,24.226)
N7: (-23.799,-0.915,23.023)
N9: (-24.331,-0.113,20.994)
O5': (-26.864,-3.046,20.611)
O3': (-25.348,-2.259,17.093)
OP1: (-21.745,-5.704,31.432)
OP2: (-22.616,-6.229,29.068)
C3': (-19.775,-1.849,28.815)
C1': (-18.567,-2.661,26.945)
C5': (-19.591,-4.077,30.071)
O6: (-21.480,-3.899,21.842)
O4': (-18.468,-3.615,27.981)
C8: (-20.502,-4.071,26.023)
C2: (-18.747,-1.812,22.719)
C6: (-20.637,-3.365,22.570)
C5: (-20.436,-3.528,23.964)
C4: (-19.422,-2.822,24.568)
P: (-21.498,-5.859,29.975)
C4': (-18.914,-3.031,29.230)
C2': (-19.054,-1.347,27.567)
O2': (-17.917,-0.583,27.940)
N1: (-19.726,-2.470,22.021)
N2: (-17.965,-0.987,22.010)
N3: (-18.548,-1.955,24.016)
N7: (-21.109,-4.314,24.892)
N9: (-19.471,-3.171,25.894)
O5': (-20.727,-4.599,29.390)
O3': (-19.875,-0.884,29.845)
OP2: (-22.616,-6.229,29.068)
C3': (-19.775,-1.849,28.815)
C1': (-18.567,-2.661,26.945)
C5': (-19.591,-4.077,30.071)
O6: (-21.480,-3.899,21.842)
O4': (-18.468,-3.615,27.981)
C8: (-20.502,-4.071,26.023)
C2: (-18.747,-1.812,22.719)
C6: (-20.637,-3.365,22.570)
C5: (-20.436,-3.528,23.964)
C4: (-19.422,-2.822,24.568)
P: (-21.498,-5.859,29.975)
C4': (-18.914,-3.031,29.230)
C2': (-19.054,-1.347,27.567)
O2': (-17.917,-0.583,27.940)
N1: (-19.726,-2.470,22.021)
N2: (-17.965,-0.987,22.010)
N3: (-18.548,-1.955,24.016)
N7: (-21.109,-4.314,24.892)
N9: (-19.471,-3.171,25.894)
O5': (-20.727,-4.599,29.390)
O3': (-19.875,-0.884,29.845)
Image (generated by PyMOL):