ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1376:A1375

Extra

PDB:
ATOM 1 O3' G A1375 -19.471 -21.599 29.845 1.00 12.02 O
ATOM 2 P A A1376 -20.692 -21.888 28.850 1.00 53.65 P
ATOM 3 OP1 A A1376 -21.632 -22.802 29.556 1.00 55.09 O
ATOM 4 OP2 A A1376 -20.106 -22.286 27.536 1.00 55.35 O
ATOM 5 O5' A A1376 -21.401 -20.477 28.657 1.00 20.61 O
ATOM 6 C5' A A1376 -22.171 -20.214 27.478 1.00 20.61 C
ATOM 7 C4' A A1376 -22.920 -18.911 27.606 1.00 20.61 C
ATOM 8 O4' A A1376 -23.976 -19.054 28.583 1.00 20.61 O
ATOM 9 C3' A A1376 -22.106 -17.696 28.002 1.00 20.61 C
ATOM 10 O3' A A1376 -22.035 -16.650 27.018 1.00 20.61 O
ATOM 11 C2' A A1376 -22.505 -17.378 29.442 1.00 20.61 C
ATOM 12 O2' A A1376 -22.730 -16.001 29.645 1.00 20.61 O
ATOM 13 C1' A A1376 -23.834 -18.104 29.616 1.00 20.61 C
ATOM 14 N9 A A1376 -23.886 -18.827 30.887 1.00 9.09 N
ATOM 15 C8 A A1376 -23.174 -19.942 31.228 1.00 9.09 C
ATOM 16 N7 A A1376 -23.428 -20.383 32.432 1.00 9.09 N
ATOM 17 C5 A A1376 -24.366 -19.495 32.919 1.00 9.14 C
ATOM 18 C6 A A1376 -25.024 -19.416 34.142 1.00 9.09 C
ATOM 19 N6 A A1376 -24.814 -20.260 35.142 1.00 9.09 N
ATOM 20 N1 A A1376 -25.912 -18.423 34.317 1.00 9.14 N
ATOM 21 C2 A A1376 -26.098 -17.562 33.317 1.00 9.10 C
ATOM 22 N3 A A1376 -25.527 -17.528 32.116 1.00 9.10 N
ATOM 23 C4 A A1376 -24.661 -18.536 31.980 1.00 9.17 C
ATOM 24 P C A1377 -23.363 -15.918 26.496 1.00 40.19 P
ATOM 25 OP1 C A1377 -22.960 -14.568 26.027 1.00 57.95 O
ATOM 26 OP2 C A1377 -24.443 -16.041 27.515 1.00 58.02 O
ATOM 27 O5' C A1377 -23.717 -16.790 25.209 1.00 29.15 O
TER

ATOM 1 O3' G B1374 -17.425 -15.880 31.126 1.00 29.73 O
ATOM 2 P G B1375 -18.592 -16.260 30.093 1.00 15.43 P
ATOM 3 OP1 G B1375 -17.997 -16.220 28.725 1.00 40.62 O
ATOM 4 OP2 G B1375 -19.795 -15.430 30.404 1.00 40.85 O
ATOM 5 O5' G B1375 -18.928 -17.769 30.460 1.00 12.02 O
ATOM 6 C5' G B1375 -17.943 -18.793 30.281 1.00 12.02 C
ATOM 7 C4' G B1375 -18.266 -19.987 31.143 1.00 12.02 C
ATOM 8 O4' G B1375 -18.308 -19.577 32.527 1.00 12.02 O
ATOM 9 C3' G B1375 -19.610 -20.642 30.882 1.00 12.02 C
ATOM 10 O3' G B1375 -19.471 -21.599 29.845 1.00 12.02 O
ATOM 11 C2' G B1375 -19.927 -21.294 32.219 1.00 12.02 C
ATOM 12 O2' G B1375 -19.298 -22.549 32.372 1.00 12.02 O
ATOM 13 C1' G B1375 -19.313 -20.297 33.207 1.00 12.02 C
ATOM 14 N9 G B1375 -20.280 -19.328 33.696 1.00 1.02 N
ATOM 15 C8 G B1375 -20.623 -18.154 33.082 1.00 0.88 C
ATOM 16 N7 G B1375 -21.537 -17.491 33.729 1.00 0.79 N
ATOM 17 C5 G B1375 -21.797 -18.266 34.845 1.00 0.79 C
ATOM 18 C6 G B1375 -22.685 -18.047 35.899 1.00 0.91 C
ATOM 19 O6 G B1375 -23.424 -17.068 36.101 1.00 0.92 O
ATOM 20 N1 G B1375 -22.673 -19.099 36.796 1.00 1.03 N
ATOM 21 C2 G B1375 -21.887 -20.202 36.698 1.00 0.97 C
ATOM 22 N2 G B1375 -22.048 -21.106 37.673 1.00 0.95 N
ATOM 23 N3 G B1375 -21.023 -20.405 35.727 1.00 0.86 N
ATOM 24 C4 G B1375 -21.036 -19.405 34.837 1.00 0.80 C
ATOM 25 P A B1376 -20.692 -21.888 28.850 1.00 53.65 P
ATOM 26 OP1 A B1376 -21.632 -22.802 29.556 1.00 55.09 O
ATOM 27 OP2 A B1376 -20.106 -22.286 27.536 1.00 55.35 O
ATOM 28 O5' A B1376 -21.401 -20.477 28.657 1.00 20.61 O
TER

Atoms:
OP1: (-21.632,-22.802,29.556)
OP2: (-20.106,-22.286,27.536)
C3': (-22.106,-17.696,28.002)
C1': (-23.834,-18.104,29.616)
C5': (-22.171,-20.214,27.478)
O4': (-23.976,-19.054,28.583)
C8: (-23.174,-19.942,31.228)
O2': (-22.730,-16.001,29.645)
C6: (-25.024,-19.416,34.142)
C5: (-24.366,-19.495,32.919)
C4: (-24.661,-18.536,31.980)
P: (-20.692,-21.888,28.850)
C4': (-22.920,-18.911,27.606)
C2': (-22.505,-17.378,29.442)
C2: (-26.098,-17.562,33.317)
N1: (-25.912,-18.423,34.317)
N3: (-25.527,-17.528,32.116)
N6: (-24.814,-20.260,35.142)
N7: (-23.428,-20.383,32.432)
N9: (-23.886,-18.827,30.887)
O5': (-21.401,-20.477,28.657)
O3': (-22.035,-16.650,27.018)
OP1: (-17.997,-16.220,28.725)
OP2: (-19.795,-15.430,30.404)
C3': (-19.610,-20.642,30.882)
C1': (-19.313,-20.297,33.207)
C5': (-17.943,-18.793,30.281)
O6: (-23.424,-17.068,36.101)
O4': (-18.308,-19.577,32.527)
C8: (-20.623,-18.154,33.082)
C2: (-21.887,-20.202,36.698)
C6: (-22.685,-18.047,35.899)
C5: (-21.797,-18.266,34.845)
C4: (-21.036,-19.405,34.837)
P: (-18.592,-16.260,30.093)
C4': (-18.266,-19.987,31.143)
C2': (-19.927,-21.294,32.219)
O2': (-19.298,-22.549,32.372)
N1: (-22.673,-19.099,36.796)
N2: (-22.048,-21.106,37.673)
N3: (-21.023,-20.405,35.727)
N7: (-21.537,-17.491,33.729)
N9: (-20.280,-19.328,33.696)
O5': (-18.928,-17.769,30.460)
O3': (-19.471,-21.599,29.845)
Image (generated by PyMOL):
PyMOL image
show in jmol