ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A678:A676

Extra

PDB:
ATOM 1 O3' G A 677 -27.395 160.444 178.345 1.00 27.89 O
ATOM 2 P A A 678 -28.881 160.008 177.921 1.00 34.67 P
ATOM 3 OP1 A A 678 -28.767 158.799 177.062 1.00 40.74 O
ATOM 4 OP2 A A 678 -29.609 161.207 177.407 1.00 40.74 O
ATOM 5 O5' A A 678 -29.520 159.563 179.312 1.00 34.70 O
ATOM 6 C5' A A 678 -30.366 160.458 180.069 1.00 34.70 C
ATOM 7 C4' A A 678 -29.780 160.709 181.433 1.00 34.70 C
ATOM 8 O4' A A 678 -28.475 161.276 181.225 1.00 34.70 O
ATOM 9 C3' A A 678 -30.529 161.751 182.257 1.00 34.70 C
ATOM 10 O3' A A 678 -31.524 161.276 183.189 1.00 34.70 O
ATOM 11 C2' A A 678 -29.435 162.352 183.120 1.00 34.70 C
ATOM 12 O2' A A 678 -29.225 161.608 184.294 1.00 34.70 O
ATOM 13 C1' A A 678 -28.195 162.166 182.265 1.00 34.70 C
ATOM 14 N9 A A 678 -27.583 163.376 181.742 1.00 33.91 N
ATOM 15 C8 A A 678 -27.576 163.912 180.488 1.00 33.91 C
ATOM 16 N7 A A 678 -26.784 164.946 180.365 1.00 33.91 N
ATOM 17 C5 A A 678 -26.260 165.111 181.633 1.00 33.91 C
ATOM 18 C6 A A 678 -25.327 166.001 182.157 1.00 33.91 C
ATOM 19 N6 A A 678 -24.670 166.905 181.428 1.00 33.91 N
ATOM 20 N1 A A 678 -25.063 165.922 183.475 1.00 33.91 N
ATOM 21 C2 A A 678 -25.682 164.982 184.197 1.00 33.91 C
ATOM 22 N3 A A 678 -26.547 164.065 183.810 1.00 33.91 N
ATOM 23 C4 A A 678 -26.790 164.186 182.500 1.00 33.91 C
ATOM 24 P C A 679 -31.764 159.692 183.456 1.00 17.96 P
ATOM 25 OP1 C A 679 -31.642 158.885 182.223 1.00 33.20 O
ATOM 26 OP2 C A 679 -33.022 159.625 184.248 1.00 33.20 O
ATOM 27 O5' C A 679 -30.602 159.222 184.443 1.00 0.79 O
TER

ATOM 1 O3' U B 675 -32.037 167.625 174.179 1.00 18.63 O
ATOM 2 P G B 676 -31.174 166.269 174.162 1.00 17.00 P
ATOM 3 OP1 G B 676 -31.258 165.715 172.788 1.00 52.28 O
ATOM 4 OP2 G B 676 -31.585 165.421 175.316 1.00 52.28 O
ATOM 5 O5' G B 676 -29.690 166.796 174.405 1.00 32.39 O
ATOM 6 C5' G B 676 -28.778 166.136 175.314 1.00 32.39 C
ATOM 7 C4' G B 676 -28.009 167.172 176.103 1.00 32.39 C
ATOM 8 O4' G B 676 -28.914 167.799 177.050 1.00 32.39 O
ATOM 9 C3' G B 676 -26.857 166.667 176.955 1.00 32.39 C
ATOM 10 O3' G B 676 -25.641 166.591 176.217 1.00 32.39 O
ATOM 11 C2' G B 676 -26.752 167.731 178.036 1.00 32.39 C
ATOM 12 O2' G B 676 -26.007 168.856 177.606 1.00 32.39 O
ATOM 13 C1' G B 676 -28.218 168.126 178.238 1.00 32.39 C
ATOM 14 N9 G B 676 -28.831 167.405 179.352 1.00 38.38 N
ATOM 15 C8 G B 676 -29.805 166.447 179.280 1.00 38.38 C
ATOM 16 N7 G B 676 -30.101 165.930 180.440 1.00 38.38 N
ATOM 17 C5 G B 676 -29.281 166.597 181.332 1.00 38.38 C
ATOM 18 C6 G B 676 -29.137 166.440 182.719 1.00 38.38 C
ATOM 19 O6 G B 676 -29.713 165.646 183.466 1.00 38.38 O
ATOM 20 N1 G B 676 -28.202 167.320 183.235 1.00 38.38 N
ATOM 21 C2 G B 676 -27.497 168.231 182.502 1.00 38.38 C
ATOM 22 N2 G B 676 -26.656 169.010 183.185 1.00 38.38 N
ATOM 23 N3 G B 676 -27.607 168.373 181.201 1.00 38.38 N
ATOM 24 C4 G B 676 -28.511 167.529 180.683 1.00 38.38 C
ATOM 25 P G B 677 -24.786 165.238 176.259 1.00 36.04 P
ATOM 26 OP1 G B 677 -24.475 165.007 177.689 1.00 32.56 O
ATOM 27 OP2 G B 677 -23.675 165.344 175.290 1.00 32.56 O
ATOM 28 O5' G B 677 -25.863 164.167 175.748 1.00 27.89 O
TER

Atoms:
OP1: (-28.767,158.799,177.062)
OP2: (-29.609,161.207,177.407)
C3': (-30.529,161.751,182.257)
C1': (-28.195,162.166,182.265)
C5': (-30.366,160.458,180.069)
O4': (-28.475,161.276,181.225)
C8: (-27.576,163.912,180.488)
O2': (-29.225,161.608,184.294)
C6: (-25.327,166.001,182.157)
C5: (-26.260,165.111,181.633)
C4: (-26.790,164.186,182.500)
P: (-28.881,160.008,177.921)
C4': (-29.780,160.709,181.433)
C2': (-29.435,162.352,183.120)
C2: (-25.682,164.982,184.197)
N1: (-25.063,165.922,183.475)
N3: (-26.547,164.065,183.810)
N6: (-24.670,166.905,181.428)
N7: (-26.784,164.946,180.365)
N9: (-27.583,163.376,181.742)
O5': (-29.520,159.563,179.312)
O3': (-31.524,161.276,183.189)
OP1: (-31.258,165.715,172.788)
OP2: (-31.585,165.421,175.316)
C3': (-26.857,166.667,176.955)
C1': (-28.218,168.126,178.238)
C5': (-28.778,166.136,175.314)
O6: (-29.713,165.646,183.466)
O4': (-28.914,167.799,177.050)
C8: (-29.805,166.447,179.280)
C2: (-27.497,168.231,182.502)
C6: (-29.137,166.440,182.719)
C5: (-29.281,166.597,181.332)
C4: (-28.511,167.529,180.683)
P: (-31.174,166.269,174.162)
C4': (-28.009,167.172,176.103)
C2': (-26.752,167.731,178.036)
O2': (-26.007,168.856,177.606)
N1: (-28.202,167.320,183.235)
N2: (-26.656,169.010,183.185)
N3: (-27.607,168.373,181.201)
N7: (-30.101,165.930,180.440)
N9: (-28.831,167.405,179.352)
O5': (-29.690,166.796,174.405)
O3': (-25.641,166.591,176.217)
Image (generated by PyMOL):
PyMOL image
show in jmol