ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BT7:D10:D5

Extra

PDB:
ATOM 1 O3' G A 9 -8.353 46.527 36.243 1.00 38.54 O
ATOM 2 P A A 10 -7.154 46.689 35.205 1.00 40.94 P
ATOM 3 OP1 A A 10 -6.196 47.622 35.855 1.00 43.96 O
ATOM 4 OP2 A A 10 -7.732 46.887 33.867 1.00 40.41 O
ATOM 5 O5' A A 10 -6.404 45.306 35.133 1.00 42.43 O
ATOM 6 C5' A A 10 -5.530 44.960 36.127 1.00 40.64 C
ATOM 7 C4' A A 10 -5.039 43.608 35.735 1.00 41.57 C
ATOM 8 O4' A A 10 -6.183 42.717 35.656 1.00 40.28 O
ATOM 9 C3' A A 10 -4.352 43.546 34.388 1.00 42.32 C
ATOM 10 O3' A A 10 -2.980 43.970 34.559 1.00 46.13 O
ATOM 11 C2' A A 10 -4.591 42.043 34.113 1.00 42.03 C
ATOM 12 O2' A A 10 -3.689 41.227 34.811 1.00 43.82 O
ATOM 13 C1' A A 10 -6.001 41.763 34.624 1.00 39.49 C
ATOM 14 N9 A A 10 -7.032 41.929 33.588 1.00 38.93 N
ATOM 15 C8 A A 10 -7.360 43.100 32.962 1.00 36.66 C
ATOM 16 N7 A A 10 -8.299 42.990 32.045 1.00 36.45 N
ATOM 17 C5 A A 10 -8.616 41.683 32.080 1.00 33.53 C
ATOM 18 C6 A A 10 -9.530 40.987 31.335 1.00 37.18 C
ATOM 19 N6 A A 10 -10.286 41.622 30.407 1.00 38.45 N
ATOM 20 N1 A A 10 -9.654 39.644 31.589 1.00 34.99 N
ATOM 21 C2 A A 10 -8.871 39.110 32.514 1.00 34.93 C
ATOM 22 N3 A A 10 -7.939 39.689 33.269 1.00 37.16 N
ATOM 23 C4 A A 10 -7.857 40.997 32.999 1.00 37.12 C
ATOM 24 P U A 11 -2.414 45.520 34.444 1.00 49.87 P
ATOM 25 OP1 U A 11 -1.757 45.984 35.670 1.00 48.41 O
ATOM 26 OP2 U A 11 -3.501 46.365 33.944 1.00 52.02 O
ATOM 27 O5' U A 11 -1.355 45.342 33.275 1.00 51.56 O
TER

ATOM 1 O3' U B 4 -10.391 43.243 22.575 1.00 33.18 O
ATOM 2 P G B 5 -11.602 43.295 23.580 1.00 32.21 P
ATOM 3 OP1 G B 5 -12.849 43.357 22.748 1.00 23.29 O
ATOM 4 OP2 G B 5 -11.180 44.367 24.486 1.00 30.88 O
ATOM 5 O5' G B 5 -11.469 41.843 24.403 1.00 28.77 O
ATOM 6 C5' G B 5 -11.903 40.614 23.764 1.00 23.90 C
ATOM 7 C4' G B 5 -11.750 39.456 24.758 1.00 28.20 C
ATOM 8 O4' G B 5 -10.409 39.415 25.365 1.00 31.48 O
ATOM 9 C3' G B 5 -12.694 39.708 25.900 1.00 29.42 C
ATOM 10 O3' G B 5 -13.346 38.611 26.372 1.00 30.74 O
ATOM 11 C2' G B 5 -11.769 40.166 27.010 1.00 30.41 C
ATOM 12 O2' G B 5 -12.370 39.909 28.254 1.00 23.81 O
ATOM 13 C1' G B 5 -10.474 39.406 26.763 1.00 28.81 C
ATOM 14 N9 G B 5 -9.321 40.003 27.452 1.00 33.72 N
ATOM 15 C8 G B 5 -8.869 41.308 27.440 1.00 31.88 C
ATOM 16 N7 G B 5 -7.837 41.476 28.261 1.00 33.62 N
ATOM 17 C5 G B 5 -7.557 40.247 28.840 1.00 31.70 C
ATOM 18 C6 G B 5 -6.586 39.841 29.796 1.00 35.69 C
ATOM 19 O6 G B 5 -5.670 40.506 30.374 1.00 34.29 O
ATOM 20 N1 G B 5 -6.769 38.491 30.125 1.00 36.21 N
ATOM 21 C2 G B 5 -7.754 37.685 29.597 1.00 36.17 C
ATOM 22 N2 G B 5 -7.827 36.387 29.973 1.00 31.20 N
ATOM 23 N3 G B 5 -8.624 38.096 28.694 1.00 33.90 N
ATOM 24 C4 G B 5 -8.492 39.360 28.381 1.00 31.58 C
TER

Atoms:
OP1: (-6.196,47.622,35.855)
OP2: (-7.732,46.887,33.867)
C3': (-4.352,43.546,34.388)
C1': (-6.001,41.763,34.624)
C5': (-5.530,44.960,36.127)
O4': (-6.183,42.717,35.656)
C8: (-7.360,43.100,32.962)
O2': (-3.689,41.227,34.811)
C6: (-9.530,40.987,31.335)
C5: (-8.616,41.683,32.080)
C4: (-7.857,40.997,32.999)
P: (-7.154,46.689,35.205)
C4': (-5.039,43.608,35.735)
C2': (-4.591,42.043,34.113)
C2: (-8.871,39.110,32.514)
N1: (-9.654,39.644,31.589)
N3: (-7.939,39.689,33.269)
N6: (-10.286,41.622,30.407)
N7: (-8.299,42.990,32.045)
N9: (-7.032,41.929,33.588)
O5': (-6.404,45.306,35.133)
O3': (-2.980,43.970,34.559)
OP1: (-12.849,43.357,22.748)
OP2: (-11.180,44.367,24.486)
C3': (-12.694,39.708,25.900)
C1': (-10.474,39.406,26.763)
C5': (-11.903,40.614,23.764)
O6: (-5.670,40.506,30.374)
O4': (-10.409,39.415,25.365)
C8: (-8.869,41.308,27.440)
C2: (-7.754,37.685,29.597)
C6: (-6.586,39.841,29.796)
C5: (-7.557,40.247,28.840)
C4: (-8.492,39.360,28.381)
P: (-11.602,43.295,23.580)
C4': (-11.750,39.456,24.758)
C2': (-11.769,40.166,27.010)
O2': (-12.370,39.909,28.254)
N1: (-6.769,38.491,30.125)
N2: (-7.827,36.387,29.973)
N3: (-8.624,38.096,28.694)
N7: (-7.837,41.476,28.261)
N9: (-9.321,40.003,27.452)
O5': (-11.469,41.843,24.403)
O3': (-13.346,38.611,26.372)
Image (generated by PyMOL):
PyMOL image
show in jmol