Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X10:X58
Extra
PDB:
ATOM 1 O3' A A 9 11.203 -3.257 21.831 1.00 50.64 O
ATOM 2 P A A 10 11.622 -4.805 21.851 1.00 51.06 P
ATOM 3 OP1 A A 10 12.379 -5.059 23.091 1.00 52.18 O
ATOM 4 OP2 A A 10 12.229 -5.154 20.547 1.00 51.75 O
ATOM 5 O5' A A 10 10.212 -5.561 21.924 1.00 51.76 O
ATOM 6 C5' A A 10 9.544 -5.812 23.140 1.00 50.65 C
ATOM 7 C4' A A 10 9.088 -7.252 23.239 1.00 49.91 C
ATOM 8 O4' A A 10 9.605 -8.057 22.150 1.00 50.29 O
ATOM 9 C3' A A 10 9.591 -7.939 24.489 1.00 49.78 C
ATOM 10 O3' A A 10 8.703 -7.640 25.544 1.00 50.04 O
ATOM 11 C2' A A 10 9.532 -9.407 24.096 1.00 50.04 C
ATOM 12 O2' A A 10 8.229 -9.937 24.223 1.00 49.26 O
ATOM 13 C1' A A 10 9.945 -9.355 22.624 1.00 50.12 C
ATOM 14 N9 A A 10 11.367 -9.624 22.352 1.00 49.64 N
ATOM 15 C8 A A 10 12.271 -8.745 21.813 1.00 49.75 C
ATOM 16 N7 A A 10 13.478 -9.240 21.663 1.00 49.85 N
ATOM 17 C5 A A 10 13.365 -10.539 22.135 1.00 49.69 C
ATOM 18 C6 A A 10 14.298 -11.602 22.249 1.00 50.17 C
ATOM 19 N6 A A 10 15.577 -11.498 21.872 1.00 49.99 N
ATOM 20 N1 A A 10 13.870 -12.782 22.761 1.00 49.75 N
ATOM 21 C2 A A 10 12.587 -12.882 23.137 1.00 49.73 C
ATOM 22 N3 A A 10 11.621 -11.958 23.073 1.00 50.00 N
ATOM 23 C4 A A 10 12.071 -10.794 22.562 1.00 49.30 C
ATOM 24 P U A 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 25 OP1 U A 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 26 OP2 U A 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 27 O5' U A 11 8.383 -5.409 26.585 1.00 50.26 O
TER
ATOM 1 O3' C B 57 22.604 -6.511 22.361 1.00 55.99 O
ATOM 2 P G B 58 21.763 -6.745 21.019 1.00 56.98 P
ATOM 3 OP1 G B 58 22.712 -6.706 19.884 1.00 57.50 O
ATOM 4 OP2 G B 58 20.590 -5.840 21.034 1.00 56.89 O
ATOM 5 O5' G B 58 21.259 -8.252 21.165 1.00 56.17 O
ATOM 6 C5' G B 58 22.189 -9.326 21.188 1.00 55.21 C
ATOM 7 C4' G B 58 21.478 -10.597 21.597 1.00 54.56 C
ATOM 8 O4' G B 58 20.960 -10.457 22.938 1.00 54.18 O
ATOM 9 C3' G B 58 20.229 -10.909 20.796 1.00 54.56 C
ATOM 10 O3' G B 58 20.592 -11.434 19.525 1.00 55.42 O
ATOM 11 C2' G B 58 19.538 -11.899 21.736 1.00 54.19 C
ATOM 12 O2' G B 58 20.127 -13.189 21.774 1.00 54.74 O
ATOM 13 C1' G B 58 19.766 -11.203 23.074 1.00 52.82 C
ATOM 14 N9 G B 58 18.675 -10.310 23.461 1.00 52.47 N
ATOM 15 C8 G B 58 18.562 -8.959 23.228 1.00 52.15 C
ATOM 16 N7 G B 58 17.460 -8.439 23.692 1.00 51.78 N
ATOM 17 C5 G B 58 16.796 -9.506 24.276 1.00 51.97 C
ATOM 18 C6 G B 58 15.546 -9.557 24.946 1.00 52.23 C
ATOM 19 O6 G B 58 14.754 -8.625 25.159 1.00 52.06 O
ATOM 20 N1 G B 58 15.241 -10.849 25.386 1.00 52.20 N
ATOM 21 C2 G B 58 16.048 -11.952 25.196 1.00 52.39 C
ATOM 22 N2 G B 58 15.610 -13.127 25.678 1.00 52.29 N
ATOM 23 N3 G B 58 17.221 -11.913 24.573 1.00 52.30 N
ATOM 24 C4 G B 58 17.533 -10.664 24.143 1.00 52.33 C
ATOM 25 P A B 59 19.569 -11.421 18.293 1.00 56.04 P
ATOM 26 OP1 A B 59 20.366 -11.369 17.045 1.00 55.61 O
ATOM 27 OP2 A B 59 18.510 -10.407 18.529 1.00 55.33 O
ATOM 28 O5' A B 59 18.950 -12.894 18.418 1.00 55.83 O
TER
ATOM 2 P A A 10 11.622 -4.805 21.851 1.00 51.06 P
ATOM 3 OP1 A A 10 12.379 -5.059 23.091 1.00 52.18 O
ATOM 4 OP2 A A 10 12.229 -5.154 20.547 1.00 51.75 O
ATOM 5 O5' A A 10 10.212 -5.561 21.924 1.00 51.76 O
ATOM 6 C5' A A 10 9.544 -5.812 23.140 1.00 50.65 C
ATOM 7 C4' A A 10 9.088 -7.252 23.239 1.00 49.91 C
ATOM 8 O4' A A 10 9.605 -8.057 22.150 1.00 50.29 O
ATOM 9 C3' A A 10 9.591 -7.939 24.489 1.00 49.78 C
ATOM 10 O3' A A 10 8.703 -7.640 25.544 1.00 50.04 O
ATOM 11 C2' A A 10 9.532 -9.407 24.096 1.00 50.04 C
ATOM 12 O2' A A 10 8.229 -9.937 24.223 1.00 49.26 O
ATOM 13 C1' A A 10 9.945 -9.355 22.624 1.00 50.12 C
ATOM 14 N9 A A 10 11.367 -9.624 22.352 1.00 49.64 N
ATOM 15 C8 A A 10 12.271 -8.745 21.813 1.00 49.75 C
ATOM 16 N7 A A 10 13.478 -9.240 21.663 1.00 49.85 N
ATOM 17 C5 A A 10 13.365 -10.539 22.135 1.00 49.69 C
ATOM 18 C6 A A 10 14.298 -11.602 22.249 1.00 50.17 C
ATOM 19 N6 A A 10 15.577 -11.498 21.872 1.00 49.99 N
ATOM 20 N1 A A 10 13.870 -12.782 22.761 1.00 49.75 N
ATOM 21 C2 A A 10 12.587 -12.882 23.137 1.00 49.73 C
ATOM 22 N3 A A 10 11.621 -11.958 23.073 1.00 50.00 N
ATOM 23 C4 A A 10 12.071 -10.794 22.562 1.00 49.30 C
ATOM 24 P U A 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 25 OP1 U A 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 26 OP2 U A 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 27 O5' U A 11 8.383 -5.409 26.585 1.00 50.26 O
TER
ATOM 1 O3' C B 57 22.604 -6.511 22.361 1.00 55.99 O
ATOM 2 P G B 58 21.763 -6.745 21.019 1.00 56.98 P
ATOM 3 OP1 G B 58 22.712 -6.706 19.884 1.00 57.50 O
ATOM 4 OP2 G B 58 20.590 -5.840 21.034 1.00 56.89 O
ATOM 5 O5' G B 58 21.259 -8.252 21.165 1.00 56.17 O
ATOM 6 C5' G B 58 22.189 -9.326 21.188 1.00 55.21 C
ATOM 7 C4' G B 58 21.478 -10.597 21.597 1.00 54.56 C
ATOM 8 O4' G B 58 20.960 -10.457 22.938 1.00 54.18 O
ATOM 9 C3' G B 58 20.229 -10.909 20.796 1.00 54.56 C
ATOM 10 O3' G B 58 20.592 -11.434 19.525 1.00 55.42 O
ATOM 11 C2' G B 58 19.538 -11.899 21.736 1.00 54.19 C
ATOM 12 O2' G B 58 20.127 -13.189 21.774 1.00 54.74 O
ATOM 13 C1' G B 58 19.766 -11.203 23.074 1.00 52.82 C
ATOM 14 N9 G B 58 18.675 -10.310 23.461 1.00 52.47 N
ATOM 15 C8 G B 58 18.562 -8.959 23.228 1.00 52.15 C
ATOM 16 N7 G B 58 17.460 -8.439 23.692 1.00 51.78 N
ATOM 17 C5 G B 58 16.796 -9.506 24.276 1.00 51.97 C
ATOM 18 C6 G B 58 15.546 -9.557 24.946 1.00 52.23 C
ATOM 19 O6 G B 58 14.754 -8.625 25.159 1.00 52.06 O
ATOM 20 N1 G B 58 15.241 -10.849 25.386 1.00 52.20 N
ATOM 21 C2 G B 58 16.048 -11.952 25.196 1.00 52.39 C
ATOM 22 N2 G B 58 15.610 -13.127 25.678 1.00 52.29 N
ATOM 23 N3 G B 58 17.221 -11.913 24.573 1.00 52.30 N
ATOM 24 C4 G B 58 17.533 -10.664 24.143 1.00 52.33 C
ATOM 25 P A B 59 19.569 -11.421 18.293 1.00 56.04 P
ATOM 26 OP1 A B 59 20.366 -11.369 17.045 1.00 55.61 O
ATOM 27 OP2 A B 59 18.510 -10.407 18.529 1.00 55.33 O
ATOM 28 O5' A B 59 18.950 -12.894 18.418 1.00 55.83 O
TER
Atoms:
OP1: (12.379,-5.059,23.091)
OP2: (12.229,-5.154,20.547)
C3': (9.591,-7.939,24.489)
C1': (9.945,-9.355,22.624)
C5': (9.544,-5.812,23.140)
O4': (9.605,-8.057,22.150)
C8: (12.271,-8.745,21.813)
O2': (8.229,-9.937,24.223)
C6: (14.298,-11.602,22.249)
C5: (13.365,-10.539,22.135)
C4: (12.071,-10.794,22.562)
P: (11.622,-4.805,21.851)
C4': (9.088,-7.252,23.239)
C2': (9.532,-9.407,24.096)
C2: (12.587,-12.882,23.137)
N1: (13.870,-12.782,22.761)
N3: (11.621,-11.958,23.073)
N6: (15.577,-11.498,21.872)
N7: (13.478,-9.240,21.663)
N9: (11.367,-9.624,22.352)
O5': (10.212,-5.561,21.924)
O3': (8.703,-7.640,25.544)
OP2: (12.229,-5.154,20.547)
C3': (9.591,-7.939,24.489)
C1': (9.945,-9.355,22.624)
C5': (9.544,-5.812,23.140)
O4': (9.605,-8.057,22.150)
C8: (12.271,-8.745,21.813)
O2': (8.229,-9.937,24.223)
C6: (14.298,-11.602,22.249)
C5: (13.365,-10.539,22.135)
C4: (12.071,-10.794,22.562)
P: (11.622,-4.805,21.851)
C4': (9.088,-7.252,23.239)
C2': (9.532,-9.407,24.096)
C2: (12.587,-12.882,23.137)
N1: (13.870,-12.782,22.761)
N3: (11.621,-11.958,23.073)
N6: (15.577,-11.498,21.872)
N7: (13.478,-9.240,21.663)
N9: (11.367,-9.624,22.352)
O5': (10.212,-5.561,21.924)
O3': (8.703,-7.640,25.544)
OP1: (22.712,-6.706,19.884)
OP2: (20.590,-5.840,21.034)
C3': (20.229,-10.909,20.796)
C1': (19.766,-11.203,23.074)
C5': (22.189,-9.326,21.188)
O6: (14.754,-8.625,25.159)
O4': (20.960,-10.457,22.938)
C8: (18.562,-8.959,23.228)
C2: (16.048,-11.952,25.196)
C6: (15.546,-9.557,24.946)
C5: (16.796,-9.506,24.276)
C4: (17.533,-10.664,24.143)
P: (21.763,-6.745,21.019)
C4': (21.478,-10.597,21.597)
C2': (19.538,-11.899,21.736)
O2': (20.127,-13.189,21.774)
N1: (15.241,-10.849,25.386)
N2: (15.610,-13.127,25.678)
N3: (17.221,-11.913,24.573)
N7: (17.460,-8.439,23.692)
N9: (18.675,-10.310,23.461)
O5': (21.259,-8.252,21.165)
O3': (20.592,-11.434,19.525)
OP2: (20.590,-5.840,21.034)
C3': (20.229,-10.909,20.796)
C1': (19.766,-11.203,23.074)
C5': (22.189,-9.326,21.188)
O6: (14.754,-8.625,25.159)
O4': (20.960,-10.457,22.938)
C8: (18.562,-8.959,23.228)
C2: (16.048,-11.952,25.196)
C6: (15.546,-9.557,24.946)
C5: (16.796,-9.506,24.276)
C4: (17.533,-10.664,24.143)
P: (21.763,-6.745,21.019)
C4': (21.478,-10.597,21.597)
C2': (19.538,-11.899,21.736)
O2': (20.127,-13.189,21.774)
N1: (15.241,-10.849,25.386)
N2: (15.610,-13.127,25.678)
N3: (17.221,-11.913,24.573)
N7: (17.460,-8.439,23.692)
N9: (18.675,-10.310,23.461)
O5': (21.259,-8.252,21.165)
O3': (20.592,-11.434,19.525)
Image (generated by PyMOL):